LOCUS       AM886130                2609 bp    DNA     linear   VRL 26-JUL-2016
DEFINITION  Abutilon mosaic virus DNA-B south africa isolate, complete genome.
ACCESSION   AM886130
VERSION     AM886130.1
KEYWORDS    C1 gene; MP; NSP; V1 gene.
SOURCE      Abutilon mosaic virus
  ORGANISM  Abutilon mosaic virus
            Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
REFERENCE   1
  AUTHORS   Shepherd,D.N., Martin,D.P., Lefeuvre,P., Monjane,A.L., Owor,B.E.,
            Rybicki,E.P. and Varsani,A.
  TITLE     A protocol for the rapid isolation of full geminivirus genomes
            from dried plant tissue
  JOURNAL   J. Virol. Methods 149 (1), 97-102 (2008)
   PUBMED   18280590
REFERENCE   2  (bases 1 to 2609)
  AUTHORS   Lefeuvre,P.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-SEP-2007) Lefeuvre P., AMIS, CIRAD - UMR PVBMT, 7
            Chemin de l'IRAT, Ligne Paradis, Saint Pierre, 97410, REUNION
FEATURES             Location/Qualifiers
     source          1..2609
                     /mol_type="genomic DNA"
                     /db_xref="taxon:10815"
                     /country="South Africa:Cape Town"
                     /isolation_source="Abutilon pannosum"
                     /organism="Abutilon mosaic virus"
                     /collection_date="17-Jul-2007"
                     /note="DNA-B"
     gene            392..>586
                     /gene="V1"
     CDS             392..>586
                     /db_xref="UniProtKB/TrEMBL:A9JPX8"
                     /codon_start=1
                     /protein_id="CAP07288.1"
                     /gene="V1"
                     /translation="MYPSRNKRGSYFNQRRHYSRNHVWKRPTAAKRHDWKRRPLNTSK
                     PNDEPKCQPNAYMRISMGLSL"
                     /product="NSP"
                     /note="premature stop codon in the sequence (frameshift
                     due to the deletion of one nucleotide)"
     gene            complement(1219..2100)
                     /gene="C1"
     CDS             complement(1219..2100)
                     /db_xref="InterPro:IPR000211"
                     /db_xref="UniProtKB/TrEMBL:A9JPX9"
                     /codon_start=1
                     /protein_id="CAP07289.1"
                     /gene="C1"
                     /translation="MDSQLVNPPNAFNYIESHRDEYQLSHDLTEIILQFPSTAAQLTA
                     RLSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTDNESLQASWTFPIRCNIDLH
                     YFSASFFSLKDPIPWKLYYRVCDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVR
                     ILSKQFTEKDVDFSHVDYGKWERKPIRCASMSRIGLRGPIEIRPGESWASRSTIGTAQ
                     SDADSEVENELHPYRHLNRLGTSVLDPGPSASIVGAQREESNITMSMGQLNELVRTTV
                     QECINNNCQASQAKSLK"
                     /product="MP"
ORIGIN      
        1 accggatggc cgcgcccccc cccctcctgg tgctgcactg gcacgcgctc caccctggtg
       61 ccgtgctctc acgcgctctc ccattggtgc gggtccttca cgctcttctt ttgagttgcc
      121 tttaatttga attaaaggtt tgtactttct cgcgcgacgt gctttattat ttgaattgtt
      181 gtcgcgcgaa gactgaatat ggaccattgt acctggtgaa ggacgtgtcc aaacttggac
      241 cttgctgctg agtctaattg tgattaatgg tggaccatcc acctatatat tgggtccgat
      301 aggttgcttt tgtggtaatt gactcagcaa tccaccacgt tttttcgtcc ccgtgtaatc
      361 gtgttgtgtt ttcttatatt atcatctgat aatgtacccg tctaggaata aacgtggatc
      421 ttactttaat caacgtcgac attattcacg caatcatgtg tggaaacggc caactgctgc
      481 gaagagacat gactggaagc gtcgaccttt aaatacgagc aagcccaacg acgagcccaa
      541 gtgtcagccc aacgcataca tgagaatcag tatgggcctg agtttgtaat ggcccagaac
      601 tcagcaatct cgtcgttcat cagttatcct gacttgggta ggtccgagcc caaccgaagc
      661 aggtcctata tcaggttgaa gcaactacgc ttcaaaggga cggtgaagat tgaacaggtt
      721 caaacggcga tgaacatgga cggatctacc cccaaagtgg aaggagtgtt ctcccttgtc
      781 attgttgtgg atcgtaaacc acaccttggc ccctctggtt gtctacatac atttgacgag
      841 ttgtttggtg ctaggataca cagtcatggt aacctcagcg taacccccgc gttgaaagat
      901 cgatattaca ttcgccacgt gtgcaaacgt gtcgtatctg tggagaagga tacgctgatg
      961 gtagacgtgg aaggatccct tcctctctct aacaggcgtt ttaattgttg ggccacgttt
     1021 aaggacgtgg atcgtgagtc atgcaagggt gtttatgata acattagcaa gaacgccctg
     1081 ttagtttatt actgctggat gtcggatacg cctgcgaagg cctccacttt tgtatcgttt
     1141 gacgttgact atattggtta attgaataaa taaagtattt aaagttgatc atcttatttg
     1201 tacaagcaaa acatacaatt atttcaatga tttggcttga gaagcctgac agttattatt
     1261 gatacattct tggaccgttg tcctgactaa ttcattcagc tgacccattg acattgtgat
     1321 gttggactcc tctctctggg cgcccactat tgacgcagat ggtcctgggt ctagaacgct
     1381 ggtacccagc ctgtttaggt gtctgtatgg atggagctcg ttctccacct ctgagtccgc
     1441 atctgactgg gctgtaccta tggtgctcct ggaagcccac gattcaccgg gcctaatctc
     1501 tattgggcct cgaagtccaa tcctggacat ggacgcgcat ctaatgggct tcctctccca
     1561 tttcccatag tccacatggg aaaagtccac gtctttttcg gtgaactgtt tggacagtat
     1621 ccttactgtt ggtgcccgga acgggatgtc gactgagtgt ttcgccgtgg acaatttcag
     1681 cttccctttg aacttggcga agtgggtccg ctgatgcacg tttgtatcgc agactctgta
     1741 gtacaatttc catggaattg ggtctttcag cgagaagaac gaagccgaga aatagtggag
     1801 atctatgttg catctgatcg gaaaagtcca cgacgcctgt aaagactcgt tgtccgtcat
     1861 tctcttgtcg tggatctcca caatcaccgt cccggtggcg ttgatcggta cttgctgtct
     1921 gtattctatg acgcagtgat cgatcttcat gcagctacga ctgagcctag ctgttaactg
     1981 agccgccgtg gacggaaatt gcagtattat ctcagttagg tcatgtgaaa gttgatattc
     2041 gtcacggtgt gactcgatgt agttgaaggc gttgggagga tttactaact gagaatccat
     2101 ttgaagaaga gaggccgcgc agcggaactt gaagcgactg ctgaagttga acagttatga
     2161 tgatgattag acctaacaaa tgatgaacaa tcactgttga tcaagaagaa ggtaaataca
     2221 aagggctctt ttcttctttt gagaaagaca gaaatgtctg acgtatacct gagcagatgg
     2281 aggaggagta actgttgaag agtcgagttg tttgagaaag aaaagagaga tgatgaagaa
     2341 tttgagagag atctggaaat gaaagagttt gtatatgaac ccagatcttc tgggttgatg
     2401 ggtatttaat tgggaaagtg ttcttctatt tctgagagaa tctatttgtt aaacggtggc
     2461 gtttttgtaa taagaagggg tactccagat gagttactcc agtgaggctc ctcaaaacta
     2521 gcccatgtaa ttggagtatt ggagtactat atatactaga actctcatta acggattggc
     2581 aacacgtggc ggccatccgc tataatatt
//