LOCUS NC_035130 6363 bp RNA linear VRL 14-JUL-2017 DEFINITION Aedes alboannulatus toti-like virus 1 strain mosWSCP114121, complete genome. ACCESSION NC_035130 VERSION NC_035130.1 DBSOURCE BioProject accession PRJNA392153 KEYWORDS RefSeq. SOURCE Aedes alboannulatus toti-like virus 1 ORGANISM Aedes alboannulatus toti-like virus 1 Viruses; unclassified viruses. REFERENCE 1 (bases 1 to 6363) AUTHORS Shi,M., Neville,P., Nicholson,J., Eden,J.S., Imrie,A. and Holmes,E.C. TITLE High Resolution Meta-Transcriptomics Reveals the Ecological Dynamics of Mosquito-Associated RNA Viruses in Western Australia JOURNAL J. Virol. (2017) In press PUBMED 28637756 REMARK Publication Status: Available-Online prior to print REFERENCE 2 (bases 1 to 6363) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (27-JUN-2017) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 6363) AUTHORS Shi,M., Neville,P., Nicholson,J., Eden,J.-S., Imrie,A. and Holmes,E.C. TITLE Direct Submission JOURNAL Submitted (30-MAY-2017) Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Biological Sciences and Sydney Medical School, The University of Sydney, Charles Perkins Centre, Sydney, NSW 2006, Australia COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to MF176352. ##Assembly-Data-START## Assembly Method :: Trinity v. 2.1.1 Sequencing Technology :: Illumina ##Assembly-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..6363 /mol_type="genomic RNA" /country="Australia: South Guildford" /collection_date="19-Aug-2015" /host="Aedes camptorhynchus" /db_xref="taxon:2010265" /strain="mosWSCP114121" /organism="Aedes alboannulatus toti-like virus 1" gene 835..3267 /locus_tag="CFB77_gp1" /db_xref="GeneID:33194335" CDS 835..3267 /locus_tag="CFB77_gp1" /db_xref="GeneID:33194335" /codon_start=1 /protein_id="YP_009388608.1" /translation="MDFNSESVKKEEEKTGVSCEGQPHPDKVEVMTLTSSIDLVSLEP VCPQATELKEKEKKEKEKETTMVVVQSPPVIETRSSTTEPVPSGPPAPHYGEHSIIPQ DVQPVEPAVGLPVGQDVIRKMSSSLMTVARRLVWGGNDYAVRVKDYLTWPRIIGPPLG ASVESTITIMHGEHDNIQRVAIKETAPRIKAEWSVQDEPSILIGSTPDVNKIANKLRG RCDISKALAEKLACRINKNLQIHDLSGFFTSGFVLAAHVQLFGCYDIAQNVVPLAADL VITANISVHAEAEVAQTLTSCLKALNEQALSFDASTLSETDIQVIMAIAAGGPSGVIT MEGARLYAATSFLDWPTRCYFIYSAKPFALPARRALTCGEIRASLYGIATRLNRFDDM AAGFVRSSTFLVGYVRSWSRAAPLAEGASPARSDARRQHYRGHFYALHETNVILVPKV RGYNFLWDLMGTSQPRTAVDDLLVPDGKALCGLNDEEVMRTTLGIGALLSCSASSVLN YFNLTARELNTWAAGVGVASTTHLKAMFESSTPGLPAPYYLATIGFAQQFAAVNIHPH CFSGMYNFSGLGAGMLHVRDDATWWWGHFGIAVPYLVQPLSMAWIWKSLADIWGCYGP NPVVDFGRDIVIGGAVDNEYMCFNRDEPLYLRLASAPAPYVYIPYGQFAINIIRQYGR ITNVRWVIDMREVARVAQGAGDLGPPIINQHQPTFAPGLGFIQTGTLLTFDWDLQCIL VPGLSKEVVGEALFMDVCRMGKRALSDVGVLRDRMDTAPFAPIDTSTMVGLIKGMSAG MSLTEKVDKAGN" /product="hypothetical protein" gene 3459..6326 /locus_tag="CFB77_gp2" /db_xref="GeneID:33194334" CDS 3459..6326 /locus_tag="CFB77_gp2" /db_xref="GeneID:33194334" /codon_start=1 /protein_id="YP_009388609.1" /translation="MSHPHVCLLSTLRIVEEWYHMLWLHPATYNKWMQMNGGDYQLGN SPSCMSLWDEVDSEYKLIVKTRNSTSSIDFAAYRELVSGSSCIELVKCRHCNNGASVN IEWSNIKAKSDLNCLDLIWRYSSDADESKTNISASQIIWHCRKRKEFQRMFGMFIPML GVTASNVTATAIAIHSLGNPSAEWIARLLIKKRICCLDPKGYSKVFKSISIAIRRSSH WPDGRKATLEEVAQSSGWELAIGRSSNTSDWIEERRKRISCKMHLRMPQNPNFDEESN EEYCKLLRVQLSALVRLLLIDREFTTSYEEFVKNRQSWVSSGSTGGHKIIVEGRLERV NKHVLFESLRTEEMVAWLDDEPRTEAVASEKFEMGKARAIYGTKPIDYTISSYVLNDI EPRLSVIPGIESGLNGMDIIASVANRKATAMQPRTECSMIDYADFNYQHTLQAQALVF DALADEFERIGAHPDKVRASRWTRDALLNQWCRFPLRSKPDKITQGMFSGCRGTNFLN TLLNEAYFLVAMNWVKTYLNLSPLYLFNIHQGDDVWISNESRLWAVGLFQSMQQSGFV FQASKQMFDVCRAEFLRVLYSDEGCVGYMARAIAALIIKPIQSSDVTGPAERAISLHG QICIISRRGFSPDSVGLLWRAMVPYGARVNLPRGGLTIPMSILYLHPSRGGLGLVPPG EMSDSKAAVKAVPTFEASSKALEEAVPCNMSRDWVVLVSERVQKEFDSKALLDMVHAS NVTDSLRPIDKLWGLRALEDNLRKWKAGLVLPRVVCDKSIMDAFFSEAGFYPDLERAI EDLLSGKMTKKSQRRRGPASYINLAVSMSPFKSLPAAAVSMKGDWETIVRACISMCIN DYIREVASYSVEELLKTVGVGVTRCLVEGQNVGLSNFEVFWHPIILSWVHDMAMERAT LGLIVAGTQDVPQAKLYVQSEFDNAIRVLNKFKDMRELSKY" /product="RdRp" ORIGIN 1 gagcttacgc tccgttgggt atccctctca tacgctgtta tgagacggaa gggggtgagg 61 tgtcttcgga ttaatagccc ctaaatccca aagaggcttg tgaaacttcc tgttctaaat 121 agtcgtttca caggccggta atgctggaag gttatgggat gcaaccacca gtccccgcga 181 gggggtgcgc ttcggcggtc tatagcagat ctcgtaccgg ctataggcga aatacgtaag 241 tattccctgt atgaaaaccc aaacctcctc gatcacaaac cgcctttatc cccagattat 301 agggggccct ataggatccc atactaatct acgtgtatgt actactgcga gtttcgactt 361 gtgaagtgta tgaatcactg tttattggct ggagtatcga tcgaggtttc ggttatcata 421 aaacaaaaac tcagctgtgt tttgatcaaa tatcaaaaca gcggctggga gtacctttca 481 attattgtct tcgggcaata actgatagtt ctttgcaagt aactttatag gtagcggcct 541 tagttagggc gggacgtcct gggtggcgcg atgctggcca aaatctgttc gtcagtgcta 601 aataggagtt gggcaagtgc ctgcttctta aacgccgaga gactacaacg gcctcactgt 661 gggaaaggat caaacgacgt gatcccatgg tgactaattt taggggtata gtccccctct 721 gtgctaggag gggcttcctg catactctat atctagcata tcgttacgat ctttgaattt 781 tttacgcgct ttaagtcttg agaacctact cttgggaatt attttcggat aattatggac 841 ttcaacagtg aatcggtaaa gaaggaagag gagaagacag gggtaagctg cgaagggcag 901 ccccaccctg acaaagttga ggtgatgaca ttaacgtcat cgatagatct ggtttcattg 961 gagccagtct gtcctcaggc caccgaactg aaggagaagg agaagaagga gaaggagaag 1021 gagacgacaa tggtagtcgt ccagtcgccc cccgtcatcg aaacccgttc atcgacaacc 1081 gagccagtac cgtcagggcc acccgcaccg cattacggtg aacacagcat tatcccgcaa 1141 gacgttcaac cagttgaacc agccgtggga ctgcctgtgg gacaagatgt cattaggaaa 1201 atgtcatctt ctctcatgac agttgcacgg cgtttggttt ggggagggaa cgactatgcg 1261 gtccgcgtga aagattatct cacctggcct cgtatcatcg gaccaccact tggagctagc 1321 gtcgagtcga caatcactat catgcatggt gaacacgata acatccaacg tgtcgcaatt 1381 aaggaaactg ctcccagaat caaggctgag tggtcagttc aggatgaacc atcaatccta 1441 attggatcca cacccgatgt gaataaaatc gcaaataaac ttagaggacg ctgtgatatc 1501 agcaaggcgt tagctgagaa attggcttgc agaatcaaca agaacctgca aatccatgac 1561 ctcagtgggt tcttcacatc gggttttgtg ctagctgcac atgtccaatt atttggatgc 1621 tatgatatcg cgcagaatgt ggttcccctg gctgcagatc ttgtgatcac cgcaaatatc 1681 tcggttcacg ctgaggctga agtcgcccaa acattgacgt cttgcctgaa agcgttgaac 1741 gaacaggctc tgtcttttga tgcgtcaaca ttgtcagaga ccgatattca agtgatcatg 1801 gctattgcag ctgggggtcc atctggagtc atcaccatgg aaggtgctcg actctacgct 1861 gcgacgagtt tcctggactg gccgactaga tgttacttca tctactcagc gaaaccattc 1921 gccttacctg ctagacgagc tctcacttgt ggagagatca gagctagctt atacggtatc 1981 gcgactcggc ttaatcgatt cgacgacatg gcggcaggtt tcgtacgatc ttctactttt 2041 ttggtaggat atgtgagatc ctggtcacgg gccgcaccac tcgctgaggg tgcctcgccg 2101 gctaggtcgg acgctcggcg tcaacactac agagggcatt tctatgcact acatgaaact 2161 aatgtgattt tggtccctaa ggttagggga tataatttcc tttgggatct catgggtaca 2221 tcgcaacccc gaactgctgt tgacgacctg ttagtgccag acggaaaggc actctgtggg 2281 ctgaacgacg aagaagtgat gcgaactacc ttaggtatcg gtgccttgtt gtcttgcagt 2341 gcaagttcag tgctcaacta tttcaatctc acggcgcgtg aattgaatac ttgggctgct 2401 ggagttggtg ttgcatcaac aacgcacctt aaggctatgt tcgagtcgtc aacacctggt 2461 ctacctgccc cctactactt ggctacaatc ggctttgccc aacagtttgc tgcagttaat 2521 atacatccac actgttttag tggtatgtac aacttcagtg gtttgggtgc tggcatgtta 2581 catgtccgtg acgatgcaac ctggtggtgg gggcactttg gtatagccgt accgtaccta 2641 gtccaaccac tcagcatggc ttggatatgg aaatcgcttg ctgacatctg gggctgctac 2701 ggccctaatc ctgttgttga ttttgggaga gatattgtca tcggaggtgc agtcgacaac 2761 gaatacatgt gcttcaatcg cgatgagcca ctgtacctac ggctcgcgtc ggcaccggct 2821 ccttatgtct acatcccata cggccagttc gccatcaaca tcatccggca gtatggacga 2881 atcactaatg tgaggtgggt tatcgacatg cgagaggtcg cacgagtagc ccagggtgcc 2941 ggagacctag ggccgccgat catcaatcag caccagccga catttgctcc aggtctaggt 3001 tttatccaaa ctggaacgtt gctgactttt gattgggact tgcagtgcat cttggtccct 3061 ggactatcga aggaagtggt gggtgaggcc ctgtttatgg acgtctgccg gatggggaag 3121 agagcgttga gcgatgttgg cgttctgcgc gatagaatgg atacggcgcc attcgcaccg 3181 attgacacca gcaccatggt cggattgatc aaggggatgt cggctggaat gtcgttgacg 3241 gagaaggtcg acaaggcggg aaactaagtt gggcccgatt gttcggtcac ttgagagatg 3301 ggcccgggct gttagtttcg agaaagtggc ggggtcattt taagctgtcg tcaggagaat 3361 tgacctgttt gtcttgtagg aagatagcta gttcgaaaga gctgtctgta gtcctacaag 3421 ataatgggtc tggtttgttg atacaaatac cgcggtggat gtcacatcca catgtttgct 3481 tactatcaac attgagaata gtagaagagt ggtaccatat gctatggtta catccagcca 3541 cttacaataa atggatgcaa atgaacggag gtgattatca gttagggaac agtcctagct 3601 gtatgtctct gtgggacgag gtcgatagtg agtacaaact catagtgaag acccgaaata 3661 gtactagttc aattgatttc gctgcttacc gggaattagt ttcaggtagc agctgcattg 3721 aattagtgaa atgcaggcac tgcaataatg gtgccagtgt aaatatagag tggagtaata 3781 ttaaggcgaa atcagatctg aactgtttag atttgatctg gaggtacagt agtgacgctg 3841 atgagtcgaa gacgaacatt agcgctagcc agatcatatg gcattgtagg aagagaaaag 3901 agttccagag gatgtttgga atgttcatac cgatgttggg tgttaccgct agcaacgtta 3961 ctgctactgc aattgctatt catagccttg ggaatcctag tgctgagtgg attgctaggt 4021 tgttgattaa gaaacgcatt tgctgtttgg atcctaaggg atacagcaag gtgttcaaga 4081 gtatcagcat agcaattaga cggtcatcgc attggccgga tggaaggaag gcgactttag 4141 aagaggtggc acagagttca ggctgggagt tggcaattgg caggtctagt aacacatcag 4201 attggattga agaacggaga aagagaatta gctgtaagat gcatctaagg atgccccaaa 4261 acccgaattt tgatgaagaa agtaatgagg agtattgtaa gcttttgagg gttcagttat 4321 cagcattggt tagattgctt ttaattgata gagaatttac aacaagttat gaggaattcg 4381 ttaagaatag gcaatcttgg gtatcatcag gaagtacagg tgggcacaag attatagtgg 4441 aaggaaggct agagagagta aacaagcacg ttctttttga gtcattaaga actgaagaaa 4501 tggtagcatg gttggacgac gagccgagaa cagaggcggt agcaagtgag aaatttgaga 4561 tgggtaaagc tagggcgatc tatggaacaa agcctatcga ttacactatc tcgtcctatg 4621 tgctcaacga catcgagcca aggcttagtg taattcccgg gattgaatca ggtttgaatg 4681 ggatggatat tatagccagt gtagcgaaca ggaaggcaac ggctatgcag cccaggacgg 4741 aatgctcaat gatcgactac gcagatttta actaccagca caccttacag gcacaagcat 4801 tggtatttga tgcattggct gatgagtttg agaggatagg tgctcacccc gacaaggtta 4861 gagctagcag gtggacgcga gatgcgctgc tgaaccaatg gtgtaggttc ccgttgagat 4921 caaagccgga taagataact caaggtatgt tctcgggttg tagagggact aatttcttaa 4981 acactctact caacgaggca tacttcctag tagctatgaa ttgggttaag acttatctca 5041 acttgtcccc gctgtacttg ttcaatatcc accagggcga tgatgtttgg atcagtaatg 5101 agtcgaggtt gtgggcagta ggcttattcc aatcaatgca acagtcagga tttgtgttcc 5161 aagcatcgaa acagatgttc gatgtttgtc gagccgagtt cctccgcgtt ctgtactcag 5221 acgaaggttg tgtcgggtac atggctcgtg caattgctgc cctgattatt aagcctatcc 5281 aaagttcgga tgttactggt ccagccgaaa gagctatatc actgcacggg caaatctgta 5341 tcattagcag gagaggcttc agccccgaca gtgtcgggct cttatggcgt gcgatggtac 5401 catacggtgc acgtgtaaac ttgccacggg gaggactaac gatcccaatg agtatactat 5461 atctacatcc gagtcgtgga ggtttaggct tggtgccgcc aggtgaaatg agtgactcca 5521 aagctgcagt caaggctgtt ccaactttcg aggcaagtag taaggcttta gaggaagccg 5581 ttccgtgtaa catgagcagg gattgggtcg tgctggtcag tgaaagagtc cagaaggaat 5641 ttgactccaa ggcactgctc gacatggtac acgcctcgaa tgtcacggat tcgttgaggc 5701 ctattgataa gttgtggggc ttgagagctt tggaggacaa cctgaggaaa tggaaagctg 5761 gtctagtgct accaagggtc gtatgcgaca agtcaatcat ggatgccttc ttttctgagg 5821 caggctttta tcctgatttg gagagggcaa ttgaagatct actgagcgga aagatgacga 5881 agaagagtca acggagaagg ggcccggctt cctatattaa cttggcagtc tctatgagtc 5941 cattcaagag cttgcctgct gcagcagtct caatgaaagg ggactgggaa acgatcgtca 6001 gagcttgtat cagcatgtgt attaatgact acattaggga agtggctagt tactcggtgg 6061 aagagctttt gaagacagtt ggggtaggtg ttacccgttg cttggtcgaa gggcaaaatg 6121 ttgggctaag caatttcgag gttttctggc atcctataat cttgtcatgg gtacatgata 6181 tggccatgga aagggccacc ttaggattaa ttgttgctgg tacccaagat gttcctcaag 6241 ctaagttgta tgttcagtcg gagtttgata atgcaattcg ggttttgaat aagtttaagg 6301 atatgagaga gttatctaag tattaggatt gagtgagtga atgaatgtgt gggagtgtgt 6361 gag //