LOCUS NC_026470 8096 bp RNA linear VRL 24-MAY-2017 DEFINITION African bat icavirus A isolate PREDICT-06105, complete genome. ACCESSION NC_026470 VERSION NC_026470.1 DBSOURCE BioProject accession PRJNA275611 KEYWORDS RefSeq. SOURCE African bat icavirus PREDICT-06105 (IcaV) ORGANISM African bat icavirus PREDICT-06105 Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; Picornaviridae; Mischivirus. REFERENCE 1 (bases 1 to 8096) AUTHORS Ng,T.F.F., Schneider,B.S., Gillis,A., LeBreton,M., Kondov,N.O., Coffey,L., Wolfe,N.D. and Delwart,E. TITLE Virome of African Animals JOURNAL Unpublished REFERENCE 2 (bases 1 to 8096) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (17-FEB-2015) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 8096) AUTHORS Ng,T.F.F., Schneider,B.S., Gillis,A., LeBreton,M., Kondov,N.O., Coffey,L., Wolfe,N.D. and Delwart,E. TITLE Direct Submission JOURNAL Submitted (03-NOV-2014) Department of Virology, Blood System Research Institute, 270 Masonic Avenue, San Francisco, CA 94118, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to KP100644. ##Assembly-Data-START## Assembly Method :: SoapDenovo2, ABySS, MetaVelvet, ABySS, Cap3, Geneious v. R6 Sequencing Technology :: Illumina ##Assembly-Data-END## COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..8096 /mol_type="genomic RNA" /country="Democratic Republic of the Congo" /isolation_source="oral swab" /acronym="IcaV" /collection_date="2013" /host="Hipposideros gigas" /db_xref="taxon:2003501" /isolate="PREDICT-06105" /lat_lon="2.345 N 11.814 E" /organism="African bat icavirus PREDICT-06105" 5'UTR 1..1163 gene 1164..7919 /locus_tag="UF59_gp1" /db_xref="GeneID:23527929" CDS 1164..7919 /locus_tag="UF59_gp1" /db_xref="GeneID:23527929" /codon_start=1 /protein_id="YP_009121743.1" /translation="MIIQITTHYSIGLYNTITMASQDIFYDAVTEQPKPKAPTLELAA ETVTDVTCDACCFSMHRVARRYPNPGERPEVPSLLKRVKRMVWQGGNNSKPSVNNTGN EGTVYNNYYLNTYNGSLDLSGHTSGSSSKPSNAASDLLSTVGTLAGSMLMDQDTEETT NLSDRIQTSKLAMTAVNTQSSVGVLQAYSTPANDSDPSSCSDVSTKSTPATQRFFTFP LASWTSTQTPFQYLTFTPMSQLSEDDNMFAHTSQMHYLHKCGWSAQVQCNASQFHAGS LLVFFAPEFPKGTRVSDEGVNFPAEDQSTWQTPVMESFLQPETQNHYSLGDLACNPQQ WSLYPHQILNIRTGTSVSLQVPFVNPAPASVTRIHTTWTLVVAVLTPLSFAAGASPNV DITVSIAPLKPVWNGIHHSPLTRQMPIPVTPRENSNMFLTTRPDRTVCAMSHCINGDK ETLVGEVTDFVQIAQMPTFLQIGTTLFKPYFEATNVVDHDYALLKVNVIPTDQQMFNT AFGSTCRLFTQYSGSLIFSLIFTGPAMAKGKFLLAYTPPGAGQPASLSQAKQAITSIW DIGLNSTFRFNLPFISPTTYRWTYSGTGSVLDIDGWFTVWQLTPLTYPAGTPQNSAIV VSVAAGPDFSLRIPLVALPSQTTDNAETGVPNPPGPDEDFVAVPDPVPTVAHSNLAYF FDRSMLFTHTNSGFWNTNSHTLAYPDDIVLLSPIRSRSQRMASNFPSSGYTRFCYSFM AASPFTYFHGDMEVTVMPENFSTTMAWEVFWFPSGAAMPTKKVAVTGVFTPGFNLQAM PVARAPNSANVVSFIVPWTSPLSAAANYFDGFSSYTRSGTSYMQLPGNNWGAIIIKCD DGKKLPFRVYIRFKKFRAWCPRPFRTVTIPSQQRSGRVRIPITDAPPLAQNPNGHKLD LADTLSLLRPHDVTQDGDVESNPGPFMFQGPKKPKEGISLAEAVIKDFLANTPDLGKE EIGKLSDVMKKAARSEKKLKPTDNEDSMSAFQAFLESDDPIDTALKGWDALRELQTLW KALKAALGSGSFWYDIACKFIKVFVSAAIYAHSPDLTTFSLLSILSLVDVCSVSSIKD AIIRYLIPITETQPPPIDLKEEETFFSKFKSLFKFEGPTDDVKDANNWFSLLKNIEWA IKLIEKFKDWILQWFKTADKTPKEKLAELMPHFAGHASRVSDYRSKGGEFPQISVDFM KTVFNLATETSQLHIANLASKFLIRRTNNKPRTEPVVVVLRGRPGAGKSVASQLIAQA VSKVATGSQSVYSFPPDSEHFDGYTGQYSVIMDDLGQNPDGQDFSTFCQMVSTTNFIP SMASLEDKGMPFSSQFIVATTNHAKFNPPTISDGKAITRRIFLDLTVRPGSECISDGK LDLEAALEPMGPAIGPFSQDCELLHTSGLIFATPQGEELSLLDVVTLVSNKVKEKNTV QSKLSALVFENPPNSMSPVEYVMTMMTMQTNETAQLRDELAQLNESVQSFQEEKRQAL KMFTIVAAFFATAYSVYKVAKYFKKSQREEEMHTELVHSLKLVNHPTASVESHFLDTP PTQSPYEGIARIQKAPMKILQLQAPGLEFEQAVYMHGTSQFNFHMPNERKPRTQTCFL VKDRVFLVNHHTWMMPFEQFEVRGQTFHKKDCTFVHLVYDSISTDLVAVQLPKGPCFR NNIPKFISASDIFPMRNTPVTGINADGPLFYSGSVMRPPAVQEISTGPTAKFMLYKAQ TMPGFCGSPIVASVAGAKKIIGIHSAGAHGVAGAVTVTKENLSAIMDYFSQTSAMTPE GAKEPLPDGPRIHIPRHTTLRKTCAYPIFKPDAGPAALSKNDPRLAEGVDFDSVLFSK HEADQTEYPKEFETMARWYADRLVCYLGKDNGKISVKEAIHGIVNLDAMCKTTSPGLP YTQKNVKRTDLLDFEEGTITSPLVRARYEKMASGDYSDHVFQTFLKDEIRPNDKISQG KTRVVDVPSLEHVIIGRQLLGKFCSKFHYFPGVETGSAIGCNPDWHWSYFAAQLAQKQ YVYDIDYSAFDSTHGSGMFKLVADTVFSPENGFDPALKDYLMSLAFSTHAFGTERFKL NGGLPSGCSATSVLNTVFNNIVIRAALKMTYKNFDPDDVLVLAYGDDLLVASDYQLDF NLVKEKLAENTLYKMTTANKQPTFPLVSTLADVQFLKRKFVPYSTSCLIFRPVMDVKN LKTILSFYHLNHLDEKIETVARLAFHSGLTVYEELFAPFKEAGITVPSWWYLQKEWEQ QFW" /product="polyprotein" mat_peptide 1164..1427 /locus_tag="UF59_gp1" /protein_id="YP_009121754.1" /product="L" mat_peptide 1428..1619 /locus_tag="UF59_gp1" /protein_id="YP_009121755.1" /product="VP4" mat_peptide 1620..2411 /locus_tag="UF59_gp1" /protein_id="YP_009121756.1" /product="VP2" mat_peptide 2412..3098 /locus_tag="UF59_gp1" /protein_id="YP_009121757.1" /product="VP3" mat_peptide 3099..3881 /locus_tag="UF59_gp1" /protein_id="YP_009121758.1" /product="VP1" mat_peptide 3882..3977 /locus_tag="UF59_gp1" /protein_id="YP_009121759.1" /product="2A" mat_peptide 3978..4466 /locus_tag="UF59_gp1" /protein_id="YP_009121760.1" /product="2B" mat_peptide 4467..5558 /locus_tag="UF59_gp1" /protein_id="YP_009121761.1" /product="2C" mat_peptide 5559..5828 /locus_tag="UF59_gp1" /protein_id="YP_009121762.1" /product="3A" mat_peptide 5829..5888 /locus_tag="UF59_gp1" /protein_id="YP_009121763.1" /product="3B" mat_peptide 5889..6515 /locus_tag="UF59_gp1" /protein_id="YP_009121764.1" /product="3C" mat_peptide 6516..7916 /locus_tag="UF59_gp1" /protein_id="YP_009121765.1" /product="3D" /note="RdRp" 5'UTR 7920..8096 ORIGIN 1 tggggtggca acctcatagc caatccctac ccccacaaca accccaatgt taaccccaac 61 atcttgggtc taagtataag ccctcctcga ggcagcgcgt ggtgggagta acatgtagtt 121 gatgcatgat tttcccgccc aacgctcaac cgagaagtgt tccaagcttg cttcaccaga 181 attgctaggg gcgaaccgac aacaccttgt tgagtttccg tcccgagaca attcatacaa 241 gttccaagac tcatgaagca attggtgcgt actgacgatt ggtttggctc gagcacgtgt 301 tccgtccttg ggataataca caacgctaag tatccaagaa aggccttgtg tagtccctca 361 cgattatgtc atgtctcgat gtcactccac gtggagtaca aacctctttc catctgtcta 421 agcttttatg gagtctccca cgattatgtg ctctcaatcg tggttgtcgc gcggtctagt 481 tctcagcgcg aagtttaagc taagcaccct cgggcgttcc cggattatgt gatcacatca 541 atttgatggc tggtcaccac gcaacgcctg gagagatact cttacttttc tcttaagatc 601 cccggtcatt tgacgcttgt aggatgatag ggttattttc cactataaat actttcatac 661 tcttggatgt tctatatcca agacgggagg acctaccccg taccccttag aggtgagatg 721 ccaagaacag gccctttctg ttctctcgac aatggcatca taggcaacaa gcatcacacc 781 aagattgcta agttttgtta agagttcttc aagctatagg gtggctgtag cgaccttctg 841 atgcctgcgg atttccccac ggagcgatcc gtgccacagg ggccaaaagc cacggctaac 901 gcccatcagg agcggcactt accccgtgcc ccacccttga aacttgaatg ttcacactgg 961 cttctctcgg ctttctgaac tgtctgcttg ttggggcccc gaaggatgcc ctggaggtac 1021 cccattttat gggatctgac caggggacac ctcagctctc taagttgctg gtgtttaaaa 1081 aacgtctaag ggcccccacc ccttaggtgg agggatccac ctttccttta ttttttaaaa 1141 ctcttttatg gtcacaattg tttatgatta ttcaaattac cactcactat tctattggct 1201 tgtacaacac tatcacaatg gcttcccagg atatatttta tgatgctgtc acagaacaac 1261 caaaacccaa ggcacccact cttgaattgg ctgctgaaac tgtcacagat gtcacctgtg 1321 atgcttgctg ttttagcatg cacagagttg cccggcgcta ccctaacccc ggtgagcgtc 1381 ctgaagttcc atcgcttttg aaacgtgtaa agcgcatggt gtggcagggg ggtaacaact 1441 ccaaaccctc tgtcaacaat acgggcaatg aaggtacagt ctacaataac tattacttaa 1501 atacatacaa tggctccttg gatttgtctg ggcatactag cggctcttca tccaaacctt 1561 caaatgccgc cagtgatctg ctctctactg ttggaactct tgcaggatca atgttaatgg 1621 accaggacac cgaggaaact accaacttat ctgacaggat ccaaacctcc aagcttgcaa 1681 tgactgccgt aaacactcag tcttcagtcg gcgtcttgca agcttactca actcctgcaa 1741 atgattcaga tccgtccagt tgctcagatg tatcaactaa gtccactcct gctactcaga 1801 gatttttcac tttccccttg gcttcatgga cttctacaca aacccctttc caatacctga 1861 ccttcacccc catgtcacag ctttcagagg atgacaacat gtttgcacat acctctcaaa 1921 tgcactattt acacaaatgt ggctggtcag ctcaggtcca gtgtaatgca tctcaattcc 1981 atgctggctc tctgttggtt ttctttgctc ctgagttccc caaagggact cgcgtgagtg 2041 acgagggtgt caactttcct gccgaagatc agtccacctg gcagacccct gtaatggaat 2101 ccttcctaca acctgaaact caaaatcact acagccttgg cgacttggct tgtaaccccc 2161 aacagtggtc tctttaccca catcaaattc tcaacatcag gactggtact agtgtttcct 2221 tacaggttcc ttttgtcaac cccgctccag cctctgtcac tcgaatccac accacctgga 2281 cactcgttgt tgcagtactc acccccctca gcttcgcggc tggcgcctcg cccaatgttg 2341 atatcactgt ttccattgct ccactcaaac ctgtttggaa tggtatccac cattcacccc 2401 tcacccgcca aatgccaatc cctgtcacac caagggaaaa ttccaacatg ttcctgacca 2461 cgcggcccga caggaccgtt tgcgccatgt cacattgcat aaatggtgac aaggaaaccc 2521 tggtcggtga agtgacggat ttcgttcaaa ttgctcagat gccaactttc ttgcaaatag 2581 ggaccactct cttcaaacct tactttgaag ccactaacgt agtcgatcat gactacgccc 2641 tgctcaaggt taatgttatc ccaacagacc agcaaatgtt caacaccgcc tttggctcca 2701 cttgtaggtt attcactcag tatagtggtt ctttaatatt ttcactcatt ttcacaggac 2761 ccgccatggc aaagggtaag tttttactgg catacactcc ccctggtgcg ggacagcccg 2821 cttctctttc acaagcaaag caggcaatca ccagcatctg ggacattgga ctcaattcca 2881 cattccgttt caatctgcct ttcataagtc ctacaaccta tagatggacc tattctggta 2941 ccggctccgt cctagacatc gacggctggt tcactgtctg gcaattgaca cctctaactt 3001 accctgctgg gaccccacag aacagcgcca tagttgtttc tgttgctgca gggcctgatt 3061 tttctctgag aattccgctg gtggctctac catcccaaac cactgataat gctgaaactg 3121 gtgtgcccaa tcctcctggc cctgatgaag actttgttgc tgttcctgat cctgtgccca 3181 cagttgctca ttccaattta gcctatttct ttgacaggtc catgctcttc actcatacta 3241 attctggatt ttggaacacc aattctcaca cacttgcata ccctgatgat atagtcctcc 3301 tttccccaat tcggagtcgt tctcagcgta tggcttcgaa tttcccgtct tctggctata 3361 ctaggttctg ctacagtttt atggctgctt ctcctttcac ctacttccac ggggatatgg 3421 aagttactgt catgcctgag aacttttcca caaccatggc gtgggaagtg ttctggttcc 3481 cgtctggtgc tgccatgcct acgaagaagg tagccgtcac aggcgttttc acccctggtt 3541 ttaatctcca ggcgatgcct gtcgcccgtg ctccaaactc tgccaatgtt gtttccttca 3601 ttgtcccttg gacctcccca ctgtcagctg ctgccaatta ctttgatggg ttctctagct 3661 ataccaggtc aggtacctct tacatgcaat taccagggaa taattggggt gcaatcatca 3721 tcaagtgcga tgatggaaag aaattgccgt tcagggtcta cattaggttc aagaaattca 3781 gggcatggtg cccaaggccc ttccgcactg tcaccattcc ttcacaacag cgctccgggc 3841 gtgtcaggat tcctatcact gatgctcctc ctctggcaca gaatcccaat gggcataaac 3901 ttgatctggc tgacactctc agtcttctta ggccccacga tgtcacccag gacggtgatg 3961 tcgagtctaa cccagggcct ttcatgtttc agggacccaa aaaacccaaa gaaggaatct 4021 cacttgctga agctgttata aaagacttcc tggccaacac ccctgacttg ggtaaagaag 4081 aaattggaaa gttgtctgat gtcatgaaga aagctgcccg gtcagaaaag aagctcaagc 4141 ctactgacaa tgaggactcc atgagcgcct ttcaggcttt cctggagtcg gatgacccaa 4201 tcgacactgc cctcaaggga tgggacgctt tgcgtgaact ccaaactctc tggaaggcgc 4261 tgaaagctgc cttaggctct ggttctttct ggtatgacat tgcttgcaaa ttcattaaag 4321 tttttgtctc tgctgctatc tacgcacatt ctcctgatct gactaccttc tcacttctct 4381 caattctctc tctggtcgat gtctgttctg tctcttccat caaggatgca ataattcgtt 4441 accttattcc aatcactgaa acacagcctc ctcctattga tctcaaggag gaggaaacct 4501 tcttttctaa atttaaaagt cttttcaaat ttgaaggccc tacagatgat gtgaaggatg 4561 caaataattg gttcagtctc ttgaagaata ttgaatgggc aatcaagtta attgagaaat 4621 tcaaggattg gatacttcaa tggttcaaaa ctgcagacaa aactccaaaa gaaaaattgg 4681 ccgaattaat gccacatttt gctggccacg cctcccgcgt gtcagactac cgctctaaag 4741 gcggtgaatt tccccaaatt tctgttgatt ttatgaaaac tgttttcaat ttggcaactg 4801 aaacctcaca gctccatata gcaaatttgg cttcaaagtt tctaattagg cgcactaaca 4861 ataagcctag gactgaaccg gtcgtggttg ttcttcgtgg gcgaccaggt gctggtaaat 4921 ctgttgcctc tcagctcatt gctcaggctg tttcaaaagt tgctactggt tctcaatctg 4981 tctattcttt tcctcctgat tctgaacatt ttgatggtta cactggtcag tattctgtga 5041 ttatggatga tttaggccaa aaccctgatg ggcaagattt ctctactttc tgtcaaatgg 5101 tttctactac aaatttcatt ccctcaatgg cctctcttga ggacaaaggg atgccttttt 5161 cttctcaatt cattgttgct actactaacc atgctaagtt caaccctcct acaatcagcg 5221 atgggaaagc cattacccgt cgtatctttc ttgatttgac tgttcgccct ggctctgaat 5281 gtatttctga tggtaaattg gatcttgaag ctgctctgga acctatgggc cctgccattg 5341 gtcctttctc tcaagattgt gaacttctac acacctcagg tctcatcttc gccactccac 5401 agggggaaga gctcagtctc cttgatgtag tcaccctggt ctcgaataag gtgaaagaaa 5461 agaacactgt ccaatctaag ctctccgctt tggtttttga gaatccacca aactcaatgt 5521 ccccagtgga gtacgtcatg accatgatga cgatgcaaac aaatgagact gcacaactaa 5581 gagatgaatt ggcacaactg aatgaatctg tccaaagttt tcaagaagaa aagagacaag 5641 ccctgaagat gttcactatc gttgctgctt tctttgctac tgcctattct gtctataaag 5701 ttgctaaata tttcaagaaa tcacaaaggg aagaagaaat gcacactgaa ttggttcact 5761 cacttaaatt ggtcaatcac cccactgcct ctgttgaatc acatttcctg gacacaccac 5821 ccacgcaaag cccttacgag gggattgcgc gcatccagaa agctccaatg aaaattcttc 5881 aattgcaggc tcccggattg gaatttgaac aagctgtgta catgcatggc acctcccaat 5941 tcaacttcca catgccaaat gaaaggaaac ccagaaccca aacctgtttt cttgtgaagg 6001 accgcgtctt cttggtgaat caccacacct ggatgatgcc ttttgaacag ttcgaagtgc 6061 gaggccaaac cttccacaag aaggactgca ccttcgttca cctggtttat gattcaatct 6121 ccactgacct tgttgctgta caacttccca aaggcccttg tttccgcaac aacattccta 6181 agttcatttc tgcttctgac atcttcccaa tgcgcaacac tcccgtcacg ggcatcaatg 6241 ctgatggccc actgttctat tctggctctg tcatgcgacc acctgctgta caagagattt 6301 ccactggtcc cactgctaaa ttcatgcttt acaaggctca gacaatgcct ggtttctgtg 6361 gctcacctat tgttgcttct gttgctggtg caaagaagat cattggcatt cattctgctg 6421 gtgctcatgg tgttgctggt gctgtaactg tcaccaaaga aaatctttct gccatcatgg 6481 actacttttc tcaaacttct gcaatgaccc ctgagggtgc aaaggagcct ctcccagatg 6541 gccctcgcat ccacatcccc cgccacacca ctctgaggaa aacctgtgct taccccatct 6601 ttaaacctga tgctggccca gcagctcttt ccaagaatga cccccgattg gctgaaggag 6661 ttgatttcga ctcggttctg ttctccaaac atgaagcaga ccaaacagaa taccccaaag 6721 aatttgagac gatggctcgc tggtacgcag accgcctggt ttgttacctt ggcaaagaca 6781 acgggaagat ttccgtgaaa gaagccatcc atggcatcgt caatctcgat gctatgtgca 6841 aaaccacctc ccctggactc ccctacaccc agaaaaatgt caaacggact gacctcctgg 6901 attttgaaga aggaacgatt acctcacccc tcgtgagggc aaggtatgag aaaatggcct 6961 ctggcgatta ctctgaccat gttttccaga cttttctcaa ggatgaaatc agacccaatg 7021 acaaaatttc ccagggaaaa acccgcgttg ttgacgtccc ctctctggag cacgtcatca 7081 tcgggagaca acttttaggc aaattctgtt ccaagttcca ttactttccc ggcgtggaga 7141 ctggatccgc cattgggtgt aaccccgatt ggcattggtc ctacttcgca gcccaattgg 7201 ctcaaaaaca gtatgtctat gacatagatt attcagcttt tgattccacc catggttcag 7261 gcatgttcaa attggttgct gatactgtct ttagccctga aaatggattt gacccagccc 7321 taaaagatta cctcatgtcc cttgcattct ccacacatgc atttggcact gaaagattca 7381 aattgaatgg tggactcccc tccggatgct ccgccaccag tgttctgaac acagtgttta 7441 acaacattgt gattagagca gcattgaaaa tgacgtacaa gaactttgac ccagatgacg 7501 tgctggtcct ggcctacggc gacgaccttc tggttgcctc cgattaccag ctcgacttca 7561 atctggtcaa ggaaaaactg gctgaaaaca ctctctacaa aatgacaact gcaaacaaac 7621 aaccaacttt tccccttgtg tcaacattgg ctgatgttca gttccttaag agaaagtttg 7681 tgccttactc tacctcttgc ctcattttcc gtcccgtaat ggacgtaaag aatctgaaga 7741 ctatactctc tttctaccac ctcaaccact tggacgagaa gattgagacg gtcgcccgtc 7801 tcgcttttca ttcaggtctt actgtgtatg aagagttgtt tgctcctttc aaggaagcgg 7861 ggatcaccgt gccttcttgg tggtacctgc agaaggagtg ggaacaacag ttctggtgaa 7921 cgtttgaagg gagagcaacg cagtaccgaa caatccagtt cggtgtccac ggccgctccc 7981 gacaacttta ccaacctgat taaccgcctt tacccctgtc gattgaggga taatggtctg 8041 gccttttctt gtttttctgt tctaacctat tcagatttga ctctactgct tgatta //