LOCUS AM502338 2781 bp DNA circular VRL 17-JUN-2007 DEFINITION African cassava mosaic virus DNA-A, clone 27-ug226-2. ACCESSION AM502338 VERSION AM502338.1 KEYWORDS AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat; protein. SOURCE African cassava mosaic virus ORGANISM African cassava mosaic virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 AUTHORS Sserubombwe,W.S., Briddon,R.W., Baguma,Y.K., Ssemakula,G.N., Bull,S., Bua,A., Otim-Nape,G.W. and Stanley,J. TITLE Diversity of begomoviruses associated with mosaic disease of cultivated cassava (Manihot esculenta Cranz) and its wild relative (Manihot glaziovii) in Uganda JOURNAL Unpublished REFERENCE 2 (bases 1 to 2781) AUTHORS Stanley,J. TITLE Direct Submission JOURNAL Submitted (16-MAR-2007) Stanley J., Department of Disease and Stress Biology, John Innes Centre, Colney Lane, Norwich NR74 7UH, UNITED KINGDOM FEATURES Location/Qualifiers source 1..2781 /mol_type="genomic DNA" /db_xref="taxon:10817" /country="Uganda:Kalangala" /clone="27-ug226-2" /organism="African cassava mosaic virus" gene 136..477 /gene="AV2" CDS 136..477 /db_xref="InterPro:IPR002511" /db_xref="InterPro:IPR005159" /db_xref="UniProtKB/TrEMBL:A6H318" /codon_start=1 /protein_id="CAM59417.1" /gene="AV2" /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLVRD LVSVIRARNYVEATRRYHHFHSRLQGSSKTELRQPIQEPCYCPHCPRHKSKTGLDEQA HVQKAHDVQDV" /product="AV2 protein" gene 296..1072 /gene="AV1" CDS 296..1072 /db_xref="GOA:A6H319" /db_xref="InterPro:IPR000263" /db_xref="InterPro:IPR000650" /db_xref="UniProtKB/TrEMBL:A6H319" /codon_start=1 /protein_id="CAM59418.1" /gene="AV1" /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRA WMNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRGDVKHLGICKVISDVTRGPGL THRVGKRLCIKSIYILGKIWMDENIKKQNHTNNVIFYLLRDRRPYGNAPQDFGQIFNM FDNEPSTATIKNDLRDRFQVLRKFHATVVGGPSGMKEQALVKRFYRLNHHVTYNHQEA GKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN" /product="coat protein" gene complement(1069..1473) /gene="AC3" CDS complement(1069..1473) /db_xref="InterPro:IPR000657" /db_xref="UniProtKB/TrEMBL:A6H320" /codon_start=1 /protein_id="CAM59419.1" /gene="AC3" /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHQQRPFLLNQD VITVQVRFNHNLRKGLGIHKCFLNFKIWTTLQPQTGLFLRVFRYQVIKYLDNMGVISI NNVIRAADHVLFNVIAKTIQCQLTHEIKFNVY" /product="AC3 protein" gene complement(1214..1621) /gene="AC2" CDS complement(1214..1621) /db_xref="GOA:A6H321" /db_xref="InterPro:IPR000942" /db_xref="UniProtKB/TrEMBL:A6H321" /codon_start=1 /protein_id="CAM59420.1" /gene="AC2" /translation="MQSSSPSQNHSTQVPIKVNHRQFKKRAIRRRRVDLVCGCSYYLH INCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNNQAPTATIPAEPGRHNSPGSIQ SQPEEGAGDSQMFSQLQDLDDLTASDWSFLKGL" /product="AC2 protein" gene complement(1530..2606) /gene="AC1" CDS complement(1530..2606) /db_xref="GOA:A6H322" /db_xref="InterPro:IPR001191" /db_xref="InterPro:IPR001301" /db_xref="InterPro:IPR022690" /db_xref="InterPro:IPR022692" /db_xref="UniProtKB/TrEMBL:A6H322" /codon_start=1 /protein_id="CAM59421.1" /gene="AC1" /translation="MRTPRFRIQAKNVFLTYPKCSIPKEHLLSFIQTLSLPSNPKFIK ICRELHQNGEPHLHALIQFDPKITITNNRLFDCVHPSCSTSFHPNIQGAKSSSDVKSY LDKDGDTVEWGQFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELVPKDFVLQ FHNLNSNLDRIFQEPPAPYVSPFLCSSFDQVPVEIEEWVADNVRDSAARPWRPNSIVI EGDSRTGKTIWARSLGPHNYLCGHLDLSPKVFNNAAWYNVIEDVDPHYLKHFKEFMGS QRDWQSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQEALKAWALKNAIFIT LTEPLYSGSNQSQSQTIQEASHTA" /product="AC1 protein" gene complement(2150..2701) /gene="AC4" CDS complement(2150..2701) /db_xref="InterPro:IPR002488" /db_xref="UniProtKB/TrEMBL:A6H323" /codon_start=1 /protein_id="CAM59422.1" /gene="AC4" /translation="MPFRDTYIMSPINRRRCSRVSLVECLQLTWSKCELLVLEFKPRM SFSHTQSVLYPKNTYCHSFKHSLSHQTLSSLKYVESCIRMGNLTCMPSSNSTPKSRLR TIVSSIVYTQAVAPVSTPTFKVPNPAQMSSPIWIRTETPSNGDNFKSMDDLLEAVNNQ RMMLTPKRLTAAVSQKLLMSFGN" /product="AC4 protein" ORIGIN 1 accggttggc cccgcccccc tttaaacgtg gtccccgcgc actacgtatg tcggccaatc 61 aggttgtagc gttaaaggtt atgtattagt ggtgggccac tatatacttg caggcgaagt 121 tgtggctagt gcgcaatgtg ggatccactg gtgaatgagt ttccagactc ggtgcatggg 181 ctgaggtgta tgcttgcaat taaatatttg caggccttag aggatacata cgagcccagt 241 actttgggcc acgatctggt tagggatcta gtctcagtta tcagggctcg taattatgtc 301 gaagcgacca ggagatatca tcatttccac tccaggctcc aaggttcgtc gaagactgaa 361 cttcgacagc ccatacagga accgtgctac tgcccccact gtccacgtca caaatcgaaa 421 acgggcctgg atgaacaggc ccatgtacag aaagcccatg atgtacagga tgtatagaag 481 cccagacata cctaggggct gtgaaggccc atgtaaggtt cagtcgtttg agcagagggg 541 tgatgtgaag caccttggta tctgtaaggt gattagtgat gtgactcgtg ggcctgggct 601 gacacacagg gtcggaaaga ggctttgtat caagtccatt tacattcttg gtaagatctg 661 gatggatgaa aatattaaga agcagaatca cactaataac gtgatttttt acctgcttag 721 ggatagaagg ccttatggca atgcgcccca agactttggg cagatattta acatgtttga 781 taacgagcct agtactgcaa caattaagaa cgatttgagg gacaggtttc aggtgttgag 841 gaaatttcat gccactgttg ttggtggtcc atctggcatg aaggagcagg cgttggtgaa 901 aaggttttac aggttgaatc atcacgtgac ttataatcat caggaggcag ggaagtatga 961 gaatcacaca gagaatgctt tgcttctgta catggcatgt actcatgcct ccaatcctgt 1021 atatgcgacg ttgaaaatac gtatatactt ctatgacagt attggcaatt aataaacatt 1081 gaattttatt tcatgagtca actgacactg aatagttttt gcaattacat tgaacaaaac 1141 atgatcagca gctctaatta cattgttaat tgagataaca cccatattat ccaagtattt 1201 aattacttgg tatctaaaga cccttaagaa aagaccagtc tgaggctgta aggtcgtcca 1261 gatcttgaag ttgagaaaac atttgtgaat ccccagcccc ttcctcaggt tgtgattgaa 1321 tcgaacctgg actgttatga cgtcctggtt cagcaggaat ggtcgctgtt ggtgcctggt 1381 tattgtgaaa tacaggggat tgtttatttc ccaggtatac acgccattca ttgcttgagg 1441 agcagtgatg agttcccctg tgcgtaaatc catgattgga gcagttgata tggaggtaat 1501 atgaacagcc acagacaaga tccactcgtc tacgccgtat ggctcgcttc ttgaattgtc 1561 tgtgattgac tttgattgga acctgagtag agtggttctg tgagggtgat gaagattgca 1621 ttctttaatg cccaggcctt tagcgcctct tgcttttcct cgtctagaaa ctctttatag 1681 gacgaggtag gtcctggatt gcagaggaag atagtgggaa ttccaccttt aatttgaacg 1741 ggtttcccgt atttcgtgtt ggactgccag tccctctggg accccatgaa ttccttaaag 1801 tgcttcaggt agtggggatc gacgtcctca atgacgttgt accaggcagc attattgaag 1861 acctttggac taaggtccag gtgtccacac aggtaattat gtgggcctaa agatcgggcc 1921 catatcgttt tccctgttct gctatcacct tctatgacaa tactattggg tctccatggc 1981 cgcgcagcgg aatctctaac attatcagcg acccattctt caatttcaac aggaacttgg 2041 tcaaaggaag aacataggaa gggagaaaca taaggagctg gtggctcctg gaaaatccta 2101 tctaaattac tatttagatt atgaaattga agtacaaagt cctttgggac taattcccga 2161 atgacattaa gagcttctga cttactgccg ctgttaagcg ctttggcgta agcatcattc 2221 gctgattgtt gaccgcctct agcagatcgt ccatcgattt gaaattgtcc ccattcgacg 2281 gtgtctccgt ccttatccag ataggacttg acatctgagc tggatttggc accttgaatg 2341 ttggggtgga aactggtgct acagcttggg tgtacacaat cgaagagacg attgttcgta 2401 atcgtgattt tggggtcgaa ttggatgagg gcatgcaagt gaggttcccc attctgatgc 2461 agctctctac atattttaat gaacttaggg tttgatggga gagagagtgt ttgaatgaat 2521 gacagtaggt gttctttggg tatagaacac tttgggtatg tgagaaagac attcttggct 2581 tgaattctaa aacgaggagt tcgcattttg accaagtcaa ttggagacac tcaactagag 2641 acactcttga gcatctcctc ctattaattg gagacattat ataggtgtct ctaaatggca 2701 ttattgtaat aagttgaact ttaatttgaa tgaaaaggct caaaaggcgc agaacaccca 2761 aggggccaac cgtataatat t //