LOCUS EU685320 2781 bp DNA circular VRL 09-DEC-2008 DEFINITION African cassava mosaic virus isolate ACMV-[NG:Ll:06] segment DNA-A, complete sequence. ACCESSION EU685320 VERSION EU685320.1 KEYWORDS . SOURCE African cassava mosaic virus ORGANISM African cassava mosaic virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 (bases 1 to 2781) AUTHORS Alabi,O.J., Ogbe,F.O., Bandyopadhyay,R., Lava Kumar,P., Dixon,A.G., Hughes,J. and Naidu,R.A. TITLE Alternate hosts of African cassava mosaic virus and East African cassava mosaic Cameroon virus in Nigeria JOURNAL Arch. Virol. 153 (9), 1743-1747 (2008) PUBMED 18661095 REFERENCE 2 (bases 1 to 2781) AUTHORS Alabi,O.J., Ogbe,F.O., Bandyopadhyay,R., Lava-Kumar,P., Dixon,A.G.O., Hughes,J. and Rayapati,N.A. TITLE Direct Submission JOURNAL Submitted (05-APR-2008) Plant Pathology, Washington State University, 24106 N. Bunn Road, Prosser, WA 99350, USA FEATURES Location/Qualifiers source 1..2781 /mol_type="genomic DNA" /country="Nigeria" /segment="DNA-A" /host="Leucaena leucocephala" /db_xref="taxon:10817" /isolate="ACMV-[NG:Ll:06]" /organism="African cassava mosaic virus" gene 136..477 /gene="AV2" CDS 136..477 /codon_start=1 /protein_id="ACF42189.1" /gene="AV2" /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLVRD LISVIRARNYVEATRRYHHFHSRLEGSSKAELRQPIQEPCYCPHCPRHKSKTGLDEQA HVQKAHDVQDV" /product="pre-coat protein" gene complement(274..639) /gene="AC5" CDS complement(274..639) /codon_start=1 /protein_id="ACF42188.1" /gene="AC5" /translation="MDLIQNLFPTLCVSPGPRVTSLITLQIPRCFTSSLCSNDWTLHG PSQPLGMSGLLYILYIMGFLYMGLFIQARFRFVTWTVGAVARFLYGLSKFSLRRTFEP GVEMMISPGRFDIITGPDN" /product="unknown" gene 296..1075 /gene="AV1" CDS 296..1072 /codon_start=1 /protein_id="ACF42184.1" /gene="AV1" /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRA WMNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGL THRVGKRFCIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNTPQDFGQIFNM FDNEPSTATIKNDLRDRFQVMTKGNTTVIGGPSGMKEQALVKRLNKLNHHVTYNHQEA GKYENHTENALLLYMACTHASNPENATLKIRIYFYDSIGN" /product="coat protein" gene complement(1069..1473) /gene="AC3" CDS complement(1069..1473) /codon_start=1 /protein_id="ACF42187.1" /gene="AC3" /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHQQRPFLLNQD IITVQVRFNHNLRKELGIHKCFLNFTIWTTLRPQTGRFLRVFRYQVLKYLDNIGVISI NDVIRAADHVLFNVIEKTIECQLTHEIKFNIY" /product="replication enhancer protein" gene complement(1214..1621) /gene="AC2" CDS complement(1214..1621) /codon_start=1 /protein_id="ACF42186.1" /gene="AC2" /translation="MQSSSPSQNHSTQVPIKVSHRQFKKRAIRRRRVDLVCGCSYYLH INCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPIFHNHQAPTTTIPAEPGHHNSPGSIQ SQPEEGAGDSQMFSQLHDLDDLTASDWSFLKSL" /product="transcriptional activator protein" gene complement(1530..2606) /gene="AC1" CDS complement(1530..2606) /codon_start=1 /protein_id="ACF42183.1" /gene="AC1" /translation="MRTPRFRVQAKNVFLTYPKCSIPKEHLLSFIQTLSLPSNPKFIK ICRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPSCSTSFHPNIQGAKSSSDVKSY LDKDGDTVEWGQFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELVPKDFVLQ FHNLNSNLDRIFQEPPAPYVSPFPCSSFDQVPDELEEWVADNVRDSAARPWRPNSIVI EGDSRTGKTIWARSLGPHNYLCGHLDLSPKVFNNDAWYNVIDDVDPHYLKHFKEFMGS QRDWQSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQEALKAWALKNAIFIT LTEPLYSGSNQSQSQTVQEASHPA" /product="replication protein" gene complement(2162..2701) /gene="AC4" CDS complement(2162..2701) /codon_start=1 /protein_id="ACF42185.1" /gene="AC4" /translation="MPFGDNYIMSPINRRRCSRVSPVERLQLTWSTCELLVLEFKPRM SFSHTQSVLYPKNTCCHSFKHYLSHQTPSSLKSVASCIRMGNLTCMPSSNSRAKSRLR TIVSSIAYTQAVAPVSTPTFKVPNPAQMSSPIWIRTATLSNGDSFRSMDDLLEEVNNQ RMMLTPKRLTAAVSQRLLM" /product="AC4 protein" /note="host activation protein" ORIGIN 1 accggttggc cccgcccccc tttaaacgtg gtccccgcgc actacgcatg tcggccaatc 61 atgcggtagc tttaaaggtt atttattagt ggtggaccac tatatactta caggcgaagt 121 tgttgctagt gcgcaatgtg ggatccactg gtgaatgagt ttccagactc ggtgcatggg 181 cttaggtgta tgcttgcaat taaatatttg caggccttag aggatacata cgagcccagt 241 actttgggcc acgatctggt tagagatcta atctcagtta tcagggcccg taattatgtc 301 gaagcgacca ggagatatca tcatttccac tccaggctcg aaggttcgtc gaaggctgaa 361 cttcgacagc ccatacagga accgtgctac tgcccccact gtccacgtca caaatcgaaa 421 acgggcctgg atgaacaggc ccatgtacag aaagcccatg atgtacagga tgtatagaag 481 cccagacata cctaggggct gtgaaggccc atgtaaggtc cagtcgtttg agcaaaggga 541 tgatgtgaag caccttggta tctgtaaggt gatcagtgat gtgacacgtg ggcctgggct 601 gacacacagg gtcggaaaga ggttttgtat caagtccatt tacattcttg gtaagatctg 661 gatggatgaa aatattaaga agcagaatca cactaataat gtgatgtttt acctgcttag 721 ggatagaagg ccgtatggca atacgcccca agactttggg cagatattta acatgtttga 781 taatgagccc agtactgcaa caattaagaa cgatttgagg gataggtttc aggtgatgac 841 gaaagggaac accactgtta ttggtggtcc atctggcatg aaggagcagg cgttggtgaa 901 aaggttaaac aagttgaatc atcacgtgac atataatcat caggaggcag ggaagtacga 961 gaatcacaca gagaatgcgt tgcttttgta catggcatgt acgcatgcct ccaatcctga 1021 aaatgctacg ttgaaaatac gtatatactt ctatgacagt attggcaatt aataaatatt 1081 gaattttatt tcatgagtca actgacactc aatagttttt tcaattacat tgaacaaaac 1141 atgatcagca gctctaatga catcgttaat ggagataaca cctatattat ccaagtattt 1201 aagtacttgg tatctaaaga ctcttaagaa acgaccagtc tgaggccgta aggtcgtcca 1261 gatcgtgaag ttgagaaaac atttgtgaat ccccagctcc ttcctcaggt tgtgattgaa 1321 tcgaacctgg actgttatga tgtcctggtt cagcaggaat ggtcgttgtt ggtgcctggt 1381 gattgtgaaa tataggggat tgtttatttc ccaggtatac acgccattca ttgcttgagg 1441 agcagtgatg agttcccctg tgcgtaaatc catgattgga gcagttgata tggaggtaat 1501 aggaacagcc acagacaaga tccactctcc tacgccggat ggctcgcttc ttgaactgtc 1561 tgtgactgac tttgattgga acctgagtag agtggttctg tgagggtgat gaagattgca 1621 ttctttaatg cccaggcctt tagcgcctct tgcttttcct cgtccaggaa ctctttatag 1681 gacgaggtag gtcctggatt gcagaggaag atagtgggaa tgccaccttt aatttgaacg 1741 ggtttcccgt atttcgtgtt ggactgccag tccctctggg accccatgaa ttccttaaag 1801 tgctttaggt agtggggatc gacgtcatca atgacgttgt accaggcatc attattgaag 1861 acctttggac taaggtccag gtgtccacac aggtaattgt gtgggcctaa agatctggcc 1921 catatcgttt tccctgttct gctatcacct tctatgacaa tactattggg tctccatggc 1981 cgcgcagcgg aatcccgaac attatcagcg acccattctt caagttcatc aggaacttgg 2041 tcaaaggaag aacatgggaa gggagaaaca taaggagctg gtggctcctg gaaaatccta 2101 tctaaattac tatttagatt atgaaactga aggacaaagt cctttgggac caattcccta 2161 attacattaa gagcctctga cttactgccg ctgttaagcg ctttggcgta agcatcattc 2221 gctgattgtt gacctcctct agcagatcgt ccatcgatct gaaactgtcc ccattcgaca 2281 gtgtcgccgt ccttatccag ataggacttg acatctgagc tggatttggc accttgaatg 2341 ttggggtgga aactggtgct acagcttggg tgtacgcaat cgaagagacg attgttcgta 2401 atcgtgattt tgccctcgaa ttggatgagg gcatgcaagt gaggttcccc attctgatgc 2461 agctcgcgac agattttaat gaacttgggg tttgatggga gagatagtgt ttgaatgaat 2521 gacaacaggt gttctttggg tatagaacac tttgggtatg tgagaaagac attcttggct 2581 tgaactctaa aacgaggagt tcgcatgttg accaagtcaa ttggagacgc tcaactggag 2641 acactcttga gcatctcctc ctattaattg gagacattat atagttgtct ccaaatggca 2701 ttcttgtaat aagtggaact ttaatttgaa tgaaaaggct caaaaggcac agaacaccca 2761 aggggccaac cgtataatat t //