LOCUS EU685322 2781 bp DNA circular VRL 09-DEC-2008 DEFINITION African cassava mosaic virus isolate ACMV-[NG:So:03] segment DNA-A, complete sequence. ACCESSION EU685322 VERSION EU685322.1 KEYWORDS . SOURCE African cassava mosaic virus ORGANISM African cassava mosaic virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 (bases 1 to 2781) AUTHORS Alabi,O.J., Ogbe,F.O., Bandyopadhyay,R., Lava Kumar,P., Dixon,A.G., Hughes,J. and Naidu,R.A. TITLE Alternate hosts of African cassava mosaic virus and East African cassava mosaic Cameroon virus in Nigeria JOURNAL Arch. Virol. 153 (9), 1743-1747 (2008) PUBMED 18661095 REFERENCE 2 (bases 1 to 2781) AUTHORS Alabi,O.J., Ogbe,F.O., Bandyopadhyay,R., Lava-Kumar,P., Dixon,A.G.O., Hughes,J. and Rayapati,N.A. TITLE Direct Submission JOURNAL Submitted (05-APR-2008) Plant Pathology, Washington State University, 24106 N. Bunn Road, Prosser, WA 99350, USA FEATURES Location/Qualifiers source 1..2781 /mol_type="genomic DNA" /country="Nigeria" /segment="DNA-A" /host="Senna occidentalis" /db_xref="taxon:10817" /isolate="ACMV-[NG:So:03]" /organism="African cassava mosaic virus" gene 136..477 /gene="AV2" CDS 136..477 /codon_start=1 /protein_id="ACF42197.1" /gene="AV2" /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLVRD LVSVIRARNYVEATRRYHHFHSRLQGSSKAELRQPIQEPCYCPHCPRHKSKTGLDEQA HVQKAHDVQDV" /product="pre-coat protein" gene complement(274..639) /gene="AC5" CDS complement(274..639) /codon_start=1 /protein_id="ACF42196.1" /gene="AC5" /translation="MDLIQNLFPTLCVSPGPRVTSLITLQIPRCFTSSLCSNDWTLHG PSQPLGMSGLLYILYIMGFLYMGLFIQARFRFVTWTVGAVARFLYGLSKFSLRRTLEP GVEMMISPGRFDIITSPDN" /product="unknown" gene complement(278..940) /gene="AC5_4" CDS complement(281..940) /codon_start=1 /protein_id="ACF42192.1" /gene="AC5_4" /translation="MIICHVMIQPVKPFHQCLLLHARWTTNNSGMKFPQHLKPIPQIV LNCCSTGLIIKHVKYLPKVLGRIAIRPSIPKQVKHHIISVILLLNIFIHPDLPKNVNG LDTKPLSDPVCQPRPTCHITNHLTDTKVLHIIPLLKRLDLTWAFTAPRYVWASIHPVH HGLSVHGPVHPGPFSICDVDSGGSSTVPVWAVEVQPSTNLGAWSGNDDISWSLRHNYE P" /product="unknown" gene 296..1075 /gene="AV1" CDS 296..1072 /codon_start=1 /protein_id="ACF42191.1" /gene="AV1" /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRA WMNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGL THRVGKRFCIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNTPQDFGQIFNM FDNEPSTATIKNDLRDRFQVLRKFHATVIGGPSGMKEQALVKRFYRLNHHVTYNHQEA GKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN" /product="coat protein" gene complement(1069..1473) /gene="AC3" CDS complement(1069..1473) /codon_start=1 /protein_id="ACF42195.1" /gene="AC3" /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHQQRPFLMNQD IITVQVRFNHNLRTELGIHKCFLNFRILTTLQPRTGLFLRVFRYQVLKYLDNMGVISI NDVIRAADHVLFNVIENTIACQLTHEIKFNVY" /product="replication enhancer protein" gene complement(1214..1621) /gene="AC2" CDS complement(1214..1621) /codon_start=1 /protein_id="ACF42194.1" /gene="AC2" /translation="MQSSSPSQNHSTQVPIKVSHRQFKKRAIRRRRVDLVCGCSYYLH INCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNHQAPTTTIPDEPGHHNSPGSIQ SQPADGAGDSQMFSQLPDLDDLTASDWSFLKGL" /product="transcriptional activator protein" gene complement(1530..2606) /gene="AC1" CDS complement(1530..2606) /codon_start=1 /protein_id="ACF42190.1" /gene="AC1" /translation="MRTPRFRIQAKNVFLTYPKCSIPKEHLLSFIRTLSLPSNPKFIK ICRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPSCSTNFHPNIQGAKSSSDVKSY LDKDGDTIEWGQFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELVPKDFVLQ FHNLNSNLDRIFQEPPTPYVSPFPCSSFDQVPDELEEWVADNVRDSAARPWRPNSIVI EGDSRTGKTMWARSLGPHNYLCGHLDLSPKVFNNDAWYNVIDDVDPHYLKHFKEFMGS QRDWQSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQAALKAWALKNAIFIT LTEPLYSGSNQSQSQTIQEESHPA" /product="replication protein" gene complement(2162..2572) /gene="AC4" CDS complement(2162..2572) /codon_start=1 /protein_id="ACF42193.1" /gene="AC4" /translation="MSFSHTQNVLYPKNTCCHSFERYLSHPTLSSLKYVESCIRMGNL TCMPSSNSRAKSRLRTIVSSIAYTQAVAPISTPTFKVPNPAPMSSPIWIRTETLSNGD NFRSMDDLLEEVNNQRMMLTPKRLTAAVSQRLLM" /product="AC4 protein" /note="host activation protein" ORIGIN 1 accggttggc cccgcccccc tttaaacgtg gtccccgcgc actacgtatg tcggccaatc 61 atgcggcagc tttaaaggtt atttattagt ggtggaccac tatatactta caggcgaagt 121 tgttgctagt gcgcaatgtg ggatccactg gtgaatgagt ttccagactc ggtgcatggg 181 cttaggtgta tgcttgcaat taaatatttg caggccttag aggatacata cgagcccagt 241 acgttgggcc acgatctggt tagagatcta gtctcagtta tcagggctcg taattatgtc 301 gaagcgacca ggagatatca tcatttccac tccaggctcc aaggttcgtc gaaggctgaa 361 cttcgacagc ccatacagga accgtgctac tgcccccact gtccacgtca caaatcgaaa 421 acgggcctgg atgaacaggc ccatgtacag aaagcccatg atgtacagga tgtatagaag 481 cccagacata cctaggggct gtgaaggccc atgtaaggtc cagtcgtttg agcagaggga 541 tgatgtgaag caccttggta tctgtaaggt gattagtgat gtgacacgtg ggcctgggct 601 gacacacagg gtcggaaaga ggttttgtat caagtccatt tacattcttg ggaagatctg 661 gatggatgaa aatattaaga agcagaatca cactaataat gtgatgtttt acctgcttag 721 ggatagaagg ccttatggca atacgcccca agactttggg cagatattta acatgtttga 781 taatgagccc agtactgcaa caattaagaa cgatttgagg gataggtttc aagtgttgag 841 gaaatttcat gccactgtta ttggtggtcc atctggcatg aaggagcagg cattggtgaa 901 aaggttttac aggttgaatc atcacgtgac atataatcat caggaggcag ggaagtatga 961 gaatcacaca gagaatgctt tgcttctata catggcatgt acgcatgcct ccaatcctgt 1021 atatgctacg ttgaaaatac gtatatactt ctacgacagt attggcaatt aataaacatt 1081 gaattttatt tcatgagtca actgacacgc aatagtattt tcaattacat tgaacaaaac 1141 atgatcagca gctctaatga catcgttaat ggagataaca cccatattat ccaagtattt 1201 aagtacttgg tatctaaaga cccttaagaa aagaccagtc cgaggctgta aggtcgtcaa 1261 gatccggaag ttgagaaaac atttgtgaat ccccagctcc gtccgcaggt tgtgattgaa 1321 tcgaacctgg actgttatga tgtcctggtt catcaggaat ggtcgttgtt ggtgcctggt 1381 gattgtgaaa tacaggggat tgtttatttc ccaggtatac acgccattca ttgcttgagg 1441 agcagtgatg agttcccctg tgcgtaaatc catgattgga gcagttgata tggaggtaat 1501 atgaacagcc acagacaaga tccactctcc tacgccggat ggctctcttc ttgaattgtc 1561 tgtgactgac tttgattgga acctgagtag agtggttctg tgagggtgat gaagattgca 1621 ttctttaatg cccaggcctt tagtgctgct tgcttttcct cgtcgaggaa ctctttatag 1681 gacgaggtag gtcctggatt gcagaggaag atagtgggaa tcccaccttt aatttgaacg 1741 ggtttcccgt acttcgtgtt ggactgccag tccctctggg accccatgaa ttccttaaag 1801 tgctttaggt agtggggatc gacgtcatca atgacgttgt accaggcatc attattgaag 1861 acctttggac taaggtccag gtgtccacac aggtaattgt gtgggcctaa agatctggcc 1921 cacatcgtct tccctgttct gctatcacct tctatgacaa tactattggg tctccatggc 1981 cgcgcagcgg aatcccgaac attatcagcg acccattctt caagttcatc aggaacttgg 2041 tcaaaggaag aacatgggaa gggagaaaca taaggagttg gtggctcttg gaaaatccta 2101 tctaaattac tatttagatt atgaaactga agtacaaagt cctttgggac taattcccta 2161 attacattaa gagcctctga cttactgccg ctgttaagcg ctttggcgta agcatcattc 2221 gctgattgtt gacctcctct agcagatcgt ccatcgatct gaaattgtcc ccattcgata 2281 gtgtctccgt ccttatccag ataggacttg acatcggagc tggatttggc accttgaatg 2341 ttggggtgga aattggtgct acagcttggg tgtacgcaat cgaagagacg attgttcgta 2401 atcgtgattt tgccctcgaa ttggatgagg gcatgcaagt gaggttcccc attctgatgc 2461 agctctctac atattttaat gaacttaggg ttggatggga gagatagcgt tcgaatgaat 2521 gacagcaggt gttctttggg tatagaacat tttgggtatg tgagaaagac attcttggct 2581 tgaattctaa aacgcggagt ccgcatattg accaagtcaa ttagagacac tcaactggag 2641 acacccttga gcatctcctc ctattaattg gagacaatat atagttgtct ccaaatggca 2701 ttcgtgtaat aagtggaact ttaatttgaa tgaaaaggct caagaggcgc ggaacaccca 2761 aggggccaac cgtataatat t //