LOCUS KJ887613 2730 bp DNA linear VRL 24-SEP-2014 DEFINITION African cassava mosaic virus isolate CF:CF100BE:07 segment B, complete sequence. ACCESSION KJ887613 VERSION KJ887613.1 KEYWORDS . SOURCE African cassava mosaic virus ORGANISM African cassava mosaic virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 (bases 1 to 2730) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Divergent evolutionary histories of Cassava Mosaic Geminiviruses in Madagascar JOURNAL Unpublished REFERENCE 2 (bases 1 to 2730) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Direct Submission JOURNAL Submitted (23-MAY-2014) UMR PVBMT, CIRAD, 7 chemin de l'IRAT, Saint-Pierre 97410, France FEATURES Location/Qualifiers source 1..2730 /mol_type="genomic DNA" /country="Central African Republic" /segment="B" /collection_date="24-Aug-2007" /host="cassava" /db_xref="taxon:10817" /isolate="CF:CF100BE:07" /lat_lon="3.9515 N 18.0283 E" /organism="African cassava mosaic virus" /altitude="398 m" gene 437..1207 /gene="BV1" CDS 437..1207 /codon_start=1 /protein_id="AIP87585.1" /gene="BV1" /translation="MYSSRKQSRNFQRKFNSNTTSRYPIRRKYVSGHTRPCVRRRLSY EPVERPLVHNVLCEKQHGDVFNLQQNTSYTSFVTYPSRGPSGDGRSRDYIKLQSMAVS GVIHAKANGTDDPMELSQVVNGVFVFSLIMDTKPYLPAGVQALPTFEELFGSYSACYV NLRLLNNQQHRYRLLHSVKRFVASSGDTKVSQFRFNKRLSTRRYNLWASFHDADLVNA GGNYRNISKNAILVSYAFVSEHSMSCKPFVQIETSYVG" /product="nuclear shuttle protein" gene complement(1216..2112) /gene="BC1" CDS complement(1216..2112) /codon_start=1 /protein_id="AIP87586.1" /gene="BC1" /translation="MDTSIPVISGDYIQSARTEYKLTNDESPITLQFPSTLERTRVRI MGKCMKVDHVVIEYRNQVPFNAQGSVIVTIRDTRLSDEQQDQAQFTFPIGCNVDLHYF SASYFSIDDNVPWQLLYKVEDSNVKNGITFAQIKAKLKLSAAKHSTDIRFKQPTIKIL SKDYGPDCVDFWSVGKPKPIRRLIQNEPGTDYDSGPKYRPITVQPGETWATKSSIGRS TSMRYIGPKPIEIDDSSSKQYASEAEFPLRGLHQLPEASLDPGDSVSQTQSMSKKDIE SIIEQTVNKCLIAHRGSSHKDL" /product="movement protein" ORIGIN 1 accggttggc cccgcccctt ttgaaatgcg ggtcccgcgc actgggtggc ctcgcccccc 61 tttgaaagtt ggtccccctc ctttttctct ttcctgcata tagtacggtg gtccccacgt 121 gcagatgttg ttagctatgg atattgcatg tgtgtcccac atgctaataa atgatctgcg 181 ggcctatcga atggcagctt gtgctactaa attagattta gtatattggt catatctctg 241 aggttaataa aatgatatat tttatttaac ttttaatatt agccattcga tattagtgat 301 ttatagttgt caatctaaca acgaccatga aggacaatta atgcgagtag cgtaattgtt 361 tacgtattat atatagggtg ctaacataca ggagtttgcg aacatcattt atcgtaatcg 421 tatacaggga tttggaatgt atagtagcag gaagcagtct agaaatttcc aaaggaaatt 481 taatagcaat accactagca ggtatccaat cagacgtaag tatgtttctg ggcatactag 541 accatgtgtt aggcgaagat tgtcatatga gccagtggag agacctttgg tccataatgt 601 tctgtgtgag aagcaacatg gtgatgtgtt taatttgcag cagaacacaa gttacacgtc 661 atttgtgacg tatccttcca ggggaccatc tggggatggg cgtagtcggg attacatcaa 721 gttgcaaagt atggctgtct cgggagtgat acatgcgaag gctaatggca ctgatgatcc 781 tatggagttg tcgcaagtgg ttaatggagt gttcgtgttt agcctaatca tggacacaaa 841 gccttattta cctgctggtg ttcaagctct tcctacattt gaagagctgt tcggatcata 901 ttccgcatgt tacgttaatt taagattatt gaataatcaa cagcatcgat ataggttatt 961 gcacagcgtg aaacgtttcg ttgcatcgtc aggagatact aaggtatctc aatttaggtt 1021 taataagcga ttgagcacca ggcgatataa tctttgggca tcattccatg atgcggatct 1081 tgtaaatgca ggtggaaatt ataggaacat aagcaagaat gctattcttg ttagttatgc 1141 ttttgtatca gagcattcaa tgtcgtgtaa gccatttgta caaatagaaa catcctatgt 1201 tggatgattt attattcata aatctttatg gctactgcct ctatgtgcta ttaagcactt 1261 gtttacagtt tgttctataa tgctttcaat atcctttttc gacatggact gtgtttgtga 1321 aacggagtcc cctggatcta gggaagcttc aggtagctgg tgtagccctc taagtgggaa 1381 ttctgcctca gaggcatact gcttggagga tgagtcgtcg atttcaattg gttttgggcc 1441 tatgtatctc atgcttgtag agcgcccaat tgaggatttt gtagcccatg tttctcctgg 1501 ttggaccgtg atgggcctat atttaggccc agagtcataa tctgtgccgg gctcattttg 1561 aatgagcctt cgaatgggct taggttttcc aacggaccag aagtcgacac agtcaggccc 1621 atagtctttg gatagtatct ttatagtggg ctgtttaaac ctaatgtctg ttgaatgttt 1681 ggcagctgac agtttcagtt ttgccttaat ttgggcaaat gtgatgccat tctttacgtt 1741 tgagtcttca accttataca gcagctgcca tggtacgtta tcatcaatgg aaaagtatga 1801 tgcagagaaa taatggaggt ccacattaca ccctatggga aatgtgaatt gggcttgatc 1861 ctgttgctca tcactgagcc tagtgtctct aatggtaaca ataacagacc cttgtgcatt 1921 aaagggcact tgattcctgt actcaatgac gacatggtct accttcatgc atttgcccat 1981 gatacgtacc cttgttcttt caagggtcga aggaaattga agtgtaatcg gcgattcatc 2041 attcgtcagt ttgtattcag tccttgcgga ttgaatatag tcgccggaga tgacaggtat 2101 agatgtatcc atgtgcaaca gtcagattat aagcttgtta aagccacaac acctgtctca 2161 tgagaaacat gattaatcta ttataaaact ggccgcgcag cggaatggcg ttaacgcaag 2221 ataaatcagc agattttgtc aacaggataa acagatgtta gaaatataaa catatatttc 2281 gtatcctatc ggaaaaatgc ttatatgtgt aatccattca aacaacatat atatatatgc 2341 atacatcatt agtcgataaa atattatata tttagagata tgtacctgat aataaccaga 2401 tttggatatc ctcgggagtg gaatgtggca agtcttatga tcataggggt catataaata 2461 tgttttaaat atgtattaag gagttatcca acgagtgata ggttacgtgg ttagatttgc 2521 atgttcaaat ctaaaataag caatgacact atagtgagag aaagttagag agagacgctc 2581 tcaattggag acactcttga gcatctcctc ctgttaattg gagacattat atagttgtct 2641 ctgaatggca ttcttgtaat aagtggaact ttaatttgaa ttaaaggctc aaaaggctca 2701 gaacacccta ggggccaacc gtataatatt //