LOCUS KJ887615 2730 bp DNA linear VRL 24-SEP-2014 DEFINITION African cassava mosaic virus isolate CF:CF107BE:07 segment B, complete sequence. ACCESSION KJ887615 VERSION KJ887615.1 KEYWORDS . SOURCE African cassava mosaic virus ORGANISM African cassava mosaic virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 (bases 1 to 2730) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Divergent evolutionary histories of Cassava Mosaic Geminiviruses in Madagascar JOURNAL Unpublished REFERENCE 2 (bases 1 to 2730) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Direct Submission JOURNAL Submitted (23-MAY-2014) UMR PVBMT, CIRAD, 7 chemin de l'IRAT, Saint-Pierre 97410, France FEATURES Location/Qualifiers source 1..2730 /mol_type="genomic DNA" /country="Central African Republic" /segment="B" /collection_date="25-Aug-2007" /host="cassava" /db_xref="taxon:10817" /isolate="CF:CF107BE:07" /lat_lon="4.2058 N 17.6073 E" /organism="African cassava mosaic virus" /altitude="487 m" gene 440..1210 /gene="BV1" CDS 440..1210 /codon_start=1 /protein_id="AIP87589.1" /gene="BV1" /translation="MYSIRKQSRNFQRKVNSNTTNRYPIRRKYVAGHTRPCVRRRLSY EPVERPLVHNVVCEKQHGDVFNLQQNTSYTSFVTYPSRGPSGDGRSRDYIKLQSMSVS GVIHAKAEGNDDPMELSHVVNGVFVFSLIMDTKPYLPAGVQALPTFEELFGSYSACYV NLRLLNNQQHRYRVLHSVKRFVSSAGDTKVSQFRFNKRLSTRRYNIWASFHDGDLVNA GGNYRNISKNAILVSYAFVSEHSMSCKPFVQIETSYVG" /product="nuclear shuttle protein" gene complement(1219..2115) /gene="BC1" CDS complement(1219..2115) /codon_start=1 /protein_id="AIP87590.1" /gene="BC1" /translation="MDTSVPVISSDYIQSARTEYKLTNDESPIILQFPSTLERTRVRI MGKCMKVDHVVIEYRNQVPFNAQGSVIVTIRDTRLSDEQQDQAQFTFPIGCNVDLHYF SASYFSIDDNVPWQLLYKVEDSNVKHGITFAQIKAKLKLSAAKHSTDIKFKQPTIKIL SKDYGPDCVDFWSVGKPKPIRRLIQNEPGTDYDTGPKYRPITVQPGETWATKSTIGRS TSMRYTGPKPIDIDDSSSKQYASEAEFPLRGLHQLPEASLDPGDSVSQTQSMSKKDIE SIIEQTVNKCLIAHRGSSHKDL" /product="movement protein" ORIGIN 1 accggttggc cccgcccccc ttttgaaacg tgggacccgc gcactggttg gccgctcccc 61 catgttaaag tgggtccccc accgtgttcg ctttcctgca gatattacgg tggtccccgc 121 atgcagatgt tgtcagctat ggatattgca tgtgtggccc acatgctaat aaatgatctg 181 cgggcctatc gaatgacagc ttgtgctact aaattatatt tagtatatcg ttcatttctc 241 tgatgttaaa taaaatgata tattttattt aacttttaat attagccatt cgatatcagt 301 gagttatagt cggtaatctg acaacgacta tgaaggacaa ttaaggctag tagcgtaatt 361 gggtatgtat tatatatagg gttctaacat acaggagtgt gagaagatcc tatatctgaa 421 gtatatacag tgtgttgtaa tgtatagtat caggaagcag tcgagaaatt tccaaaggaa 481 agttaacagc aataccacta acaggtatcc aatccggcgt aagtatgttg ctgggcatac 541 tagaccatgt gttaggcgaa gattgtcata tgagccagtg gagagaccgt tggtccataa 601 tgttgtgtgt gagaagcaac atggtgatgt gtttaatttg cagcagaaca caagttacac 661 gtcatttgtg acttatcctt ccaggggacc atctggggat gggcgtagtc gggattacat 721 caagctgcaa agtatgtctg tctcgggagt gatacatgcg aaggcggagg gcaatgatga 781 tcctatggag ttgtctcatg tggttaatgg agtgttcgtg tttagcttaa tcatggacac 841 aaagccttat ttgcctgctg gtgttcaagc tctgcctaca tttgaagagc tgttcggatc 901 atattccgcg tgttacgtta acctaagatt attgaataat caacagcatc gatatagggt 961 attgcacagc gtgaaacgtt tcgtttcatc tgcaggagat actaaggtat ctcaatttag 1021 gtttaataag cgattgagca ccaggcgata taatatttgg gcatcattcc atgatggaga 1081 tctggtaaat gcaggtggaa attataggaa cataagcaag aatgctattc ttgtcagtta 1141 tgcttttgta tcagagcatt caatgtcttg taagccattt gtacaaatag aaacatccta 1201 tgttggatga tttattattc ataaatcttt atggctactg cctctatgtg ctattaagca 1261 cttgtttaca gtttgttcta taatgctttc aatgtccttt ttcgacatgg actgggtttg 1321 tgaaacggag tcccctggat ctagggaagc ttcaggtagc tggtgtagtc ctctaagtgg 1381 gaattctgcc tcagaggcat actgcttgga ggatgagtcg tcgatgtcaa ttggttttgg 1441 gcctgtgtat ctcatgcttg tagagcgccc aattgttgat tttgtagccc atgtttctcc 1501 tggttggacc gtgatgggcc tatatttagg cccagtgtca taatctgtgc cgggctcatt 1561 ctgaatgagc cttcgaatgg gcttaggttt tccaacggac cagaagtcga cacagtcagg 1621 cccatagtct ttggatagta tttttatagt gggctgttta aatttaatgt ccgttgaatg 1681 tttggcagct gacagcttca gttttgcctt aatttgggca aatgtgattc catgctttac 1741 gtttgagtct tcaaccttat acagcagctg ccatggtacg ttatcatcaa ttgaaaagta 1801 ggatgcagag aaataatgga ggtccacatt acaccctatg ggaaatgtga attgggcttg 1861 atcctgttgc tcatcactga gcctagtgtc cctaatggtg acaataacag aaccttgtgc 1921 attaaagggc acttgattcc tgtactcaat gacgacatgg tccaccttca tgcatttgcc 1981 catgatacgt acccttgttc tttcaagggt cgaaggaaat tgaagtataa tcggcgattc 2041 atcattcgtc agtttgtatt ctgtccgtgc ggattgaata tagtcgctgg agatgacagg 2101 tacagatgta tccatgttca acactctgat tataagcttg tcaaagccac aacacctgtc 2161 tcatgagaaa catgattaat ctattgtaaa actggccgcg cagcggaatg gctttaattc 2221 aagataaatc agaagattgt gtcaacagga taaacagatt gtagaaatat agacatatat 2281 ttcttatcct atcggaaaaa tgcgtcatgt gtaatccaat tcaaacatat atatatattc 2341 atacatcatt agtcgatgaa acattatata tgtagagata tgtaccttat aataacttga 2401 attggatatc ctccggagtg gaatgtggat agtcgtatta tcaaagtggt catataaaga 2461 tgttttatat atttattaag gagttatcca acgagtgata gttgacggtg ttagatttgc 2521 atgtttaaat ctaaaataag aataacacta tagtgagaga aagttagaga gagacgctct 2581 caattggaga cacacttgag catctcctcc tgtaaattgg agacattata tagttgtctc 2641 taaatggcat tcttgtaata agtggaactt taatttgaat gaaaaggctc aaaaggctca 2701 gaacacccaa ggggccaacc gtataatatt //