LOCUS KJ887619 2730 bp DNA linear VRL 24-SEP-2014 DEFINITION African cassava mosaic virus isolate CF:CF127BE:07 segment B, complete sequence. ACCESSION KJ887619 VERSION KJ887619.1 KEYWORDS . SOURCE African cassava mosaic virus ORGANISM African cassava mosaic virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 (bases 1 to 2730) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Divergent evolutionary histories of Cassava Mosaic Geminiviruses in Madagascar JOURNAL Unpublished REFERENCE 2 (bases 1 to 2730) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Direct Submission JOURNAL Submitted (23-MAY-2014) UMR PVBMT, CIRAD, 7 chemin de l'IRAT, Saint-Pierre 97410, France FEATURES Location/Qualifiers source 1..2730 /mol_type="genomic DNA" /country="Central African Republic" /segment="B" /collection_date="26-Aug-2007" /host="cassava" /db_xref="taxon:10817" /isolate="CF:CF127BE:07" /lat_lon="3.9252 N 18.063 E" /organism="African cassava mosaic virus" /altitude="407 m" gene 439..1209 /gene="BV1" CDS 439..1209 /codon_start=1 /protein_id="AIP87597.1" /gene="BV1" /translation="MYSIRKQSRNFPRKFNSNTTNRYPIRRKYVAGHTRPCVRRRLSY EPVERPLVHNVLCEKQHGDVFNLQQNTSYTSFVTYPSRGPSGDGRSRDYIKLQSISVS GVIHAKANCNDDPMELSHVVNGVFVFSVIMDTKPYLPAGVQALPTFEELFGSYSASYV NLRLLNNQQHRYRVLHSVKRFVSSSGDTKVSQFRFNKRLSTRRYTIWASFHDVDLVNA GGNYRNISKNAILVSYAFVSEHSMSCKPFVQIETSYVG" /product="nuclear shuttle protein" gene complement(1218..2114) /gene="BC1" CDS complement(1218..2114) /codon_start=1 /protein_id="AIP87598.1" /gene="BC1" /translation="MDTSVPVISSDYIQSARTEYKLTNDEAPITLQFPSTLERTRVRI MGKCMKVDHVVIEYRNQVPFNAQGSVIVTIRDTRLSDEQQDQAQFTFPIGCNVDLHYF SASYFSIDDNVPWQLLYKVEDSNVKNGITFAQIKAKLKLSAAKHSTDIRFKQPTIKIL SKDYGPDCVDFWSVGKPKPIRRLIQNEPGTDYDTGPKYRPITVQPGETWATKSTIGRS TSMRYTGPKPIDLDGSSSKQYASEAEFPLRGLHQLPEASLDPGDSVSQSQSMSKQDIE SIIEQTINKCLIAHRGSSHKDL" /product="movement protein" ORIGIN 1 accggttggc cccgcctcgt tttgacatgt ggaccccgcg cactggtggg ccgcgtcccc 61 ccctttgaaa gtgggtgtcc caccttttct ctttcctgca gatacgacgg tggtccccgc 121 atgcagatgt tgtcagcgat ggatattgca tgtgtggccc acatgctaat aaatgatctg 181 cgggcctatc gaatgacagc ctgtgctact aaattatatt gagtatattg ttcatggctc 241 tgagtttaat aaaatgatat attttattta actgtgaata ttagccattc gatagtagtg 301 atttatagtc gtcaatctga caacgaccac gaaggacaat taatgctagt agcgtaattg 361 tgtatgtatt atatataggg ttgtaacata caggatttgg agaatatcat ttatctgaat 421 tatatacagg gattggtaat gtatagtatc aggaagcagt ctagaaattt cccaaggaaa 481 tttaacagca ataccacgaa caggtatcca atcaggcgga agtatgttgc tgggcatact 541 agaccatgtg tgaggcgaag attgtcatat gagccagtgg agagaccgtt ggtccataat 601 gttttgtgtg agaagcaaca tggtgatgtg tttaatttgc agcagaacac aagttacacg 661 tcatttgtaa cttatccttc caggggacca tctggtgatg ggcgtagtcg ggattacatc 721 aagttgcaaa gtatttccgt ttcgggagtg atacatgcga aggctaattg caatgatgat 781 cctatggagt tgtctcatgt ggttaatgga gtgttcgtgt ttagcgtaat catggacaca 841 aagccgtatt taccagctgg tgttcaagct cttcctacat tcgaagagct gtttggatca 901 tattccgcta gttacgttaa tttaagatta ttgaataatc aacagcatcg atatagggta 961 ttgcacagcg tgaaacgttt cgtttcatct tcaggagata cgaaggtatc tcaatttagg 1021 tttaataagc gattgagcac caggcgatat actatttggg catcattcca tgatgtggat 1081 ctggtaaatg cagggggaaa ttataggaac ataagcaaga atgctattct tgtcagttat 1141 gcttttgtat cagagcattc gatgtcttgt aagccatttg tacaaataga aacatcctat 1201 gttggatgat ttattattca taaatcttta tggctactgc ctctatgtgc tattaagcac 1261 ttgtttatag tctgttcgat aatgctttca atgtcctgtt tcgacatgga ctgggattgg 1321 gaaacggagt cccctggatc gagggaagct tcaggtagct ggtgtagtcc tctaagtggg 1381 aattcggcct cagaggcata ctgcttggag gatgagccgt cgaggtcaat tggttttggg 1441 cctgtgtatc tcatgcttgt agagcgccca attgttgatt tggtagccca tgtttctcct 1501 ggttggaccg tgatgggcct atatttaggc ccagtgtcat aatctgtgcc gggctcattc 1561 tgaatgagcc ttcgaatggg cttaggtttc ccaacggacc agaagtcgac acagtcaggc 1621 ccatagtctt tggatagtat tttgatagtg ggctgtttaa atctaatgtc cgttgaatgt 1681 ttggcagctg acagcttcag ttttgcctta atttgggcaa atgtgattcc attttttacg 1741 tttgagtctt caaccttata cagcagctgc catggcacgt tatcatcaat tgaaaagtag 1801 gatgcagaga aataatggag gtccacatta caccctatgg gaaatgtgaa ttgggcttga 1861 tcctgttgct catcactgag cctagtgtcc ctaatggtga caataacaga accttgtgca 1921 ttaaagggca cttgattcct gtactcaatg acgacatggt cgaccttcat gcatttgccc 1981 atgatacgta cccttgttcg ttcaagggtc gaaggaaatt gaagtgtaat cggcgcttca 2041 tcattcgtca gtttgtattc tgtcctggcg gattgaatat agtcgctgga aatgacaggt 2101 acagatgtat ccatgttcaa cactctgatt ataagcttgt caaagccaca acacctgtct 2161 tgagaagaaa catgattaat ctattgtaaa actggccgcg cagcggaatg gctgtaattc 2221 aagacaaatc agaagagttt gtcaacagga taaacagagt gtagaaatat agacatatat 2281 ttcctatcct atctgaaaaa tgcttctatg tgtaatccaa ttcaaacaga gatatatgca 2341 tacatcatta atcgatgaaa cattatatat gaagagatat gtaccgtata ataacgtgaa 2401 ttggatatcc gctggagttg aatgtggata gtcttagtat caaagaggag atataaatat 2461 gttttatata tttattaagg agttatccaa cgaatgatag ttgacgttgt tagatttgca 2521 tgttcaaatc taaaataagt tattacacca tagtgagaga aagttagaga gagacgctct 2581 caattggaga cacacttgag catctcctcc tgtaaattgg agacattata tagttgtctc 2641 caaagggcag tctggtaata agtggaactt taatttgaat taaaaggctc aaaaggctca 2701 gaacacccaa ggggccaacc gtataatatt //