LOCUS KJ887625 2727 bp DNA linear VRL 24-SEP-2014 DEFINITION African cassava mosaic virus isolate CF:CF268BN:08 segment B, complete sequence. ACCESSION KJ887625 VERSION KJ887625.1 KEYWORDS . SOURCE African cassava mosaic virus ORGANISM African cassava mosaic virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 (bases 1 to 2727) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Divergent evolutionary histories of Cassava Mosaic Geminiviruses in Madagascar JOURNAL Unpublished REFERENCE 2 (bases 1 to 2727) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Direct Submission JOURNAL Submitted (23-MAY-2014) UMR PVBMT, CIRAD, 7 chemin de l'IRAT, Saint-Pierre 97410, France FEATURES Location/Qualifiers source 1..2727 /mol_type="genomic DNA" /country="Central African Republic" /segment="B" /collection_date="2008" /host="cassava" /db_xref="taxon:10817" /isolate="CF:CF268BN:08" /lat_lon="6.4406 N 17.40 E" /organism="African cassava mosaic virus" /altitude="205 m" gene 438..1208 /gene="BV1" CDS 438..1208 /codon_start=1 /protein_id="AIP87609.1" /gene="BV1" /translation="MYSIRKQSRNFQRKFNSNTTNRYPIRRKHVAGHTRPCVRRRLSY EPVERPLVHNVLCEKQHGDVFNLQQNTSYTSFVTYPSRGPSGDGRSRDYIKLQSMSVS GVIHAKATSNDDPMEVSPVVNGVFVFSVIMDTKPYLPAGVQALPTFEELFGSYSAGYV NLRLLNNQQHRYRVLHSVKRFVSSSGDTKVSQFRFNKRLSTRRYTIWASFHDVDLVNA GGNYRNISKNAILVSYAFVSEHSMSCKPFVQIETSYVG" /product="nuclear shuttle protein" gene complement(1217..2113) /gene="BC1" CDS complement(1217..2113) /codon_start=1 /protein_id="AIP87610.1" /gene="BC1" /translation="MDTSVPVISGDYIQSARTEYKLTNDESPITLQFPSTLERTRVRI MGKCMKVDHVVIEYRNQVPFNAQGSVIVTIRDTRLSDEQQDQAQFTFPIGCNVDLHYF SASYFSIDDNVPWQLLYKVEDSNVKHGITFAQIKAKLKLSAAKHSTDIKFKQPTIRIL SKDYGPDCVDFWSVGKPKPIRRLIQNAPGTDYDTGPTYRPITVQPGETWATKSTLGRS TSMRYTGPKPIDLDASSSKQYASEAEFPLRGLHQLPEASLDPGDSVSQTQSMSKQDIE SIIEQTINKCLIAHRGSSHKDL" /product="movement protein" ORIGIN 1 accggttggc cccgcccctt ttgaaatgtg gaccccgctc actggtgggt ctcgtctccc 61 ttttgaaagt gggtttctca cctctttctc tttcctgcag atacgacggt ggtccccgca 121 tgcagatgtt gtcagctatg gatattgcat gtgtggccca catgctaata aatgatctgc 181 gggcctatcg aatgacagct tgtgctacta aattatattt agtatattgt gcatgtctct 241 gagtttaata aaatgatata ttttatttaa ctttaaatat taaccattcg atattagtga 301 tttatagtcg tcaatctgac aacgaccatg aaggacaatt aaggctagta gcttaattgt 361 gtatgtatta tatatatggt tgtaacatac aggaattgga gaatatcatt tatcggaaat 421 atatacaggg attagtaatg tatagtatca ggaagcagtc tagaaatttc cagaggaaat 481 ttaacagcaa taccactaac aggtatccaa tcaggcgtaa gcatgttgct gggcatacta 541 gaccatgtgt gaggcgaaga ttgtcatatg agccagtgga gagaccgttg gtccataatg 601 ttctgtgtga gaagcaacat ggtgatgtgt ttaatttgca gcagaacaca agttacacgt 661 catttgtaac gtatccctcc aggggaccat ctggtgatgg gcgtagtcgg gattatatca 721 agttgcaaag tatgtccgtc tcgggagtga tacatgcgaa ggctaccagc aacgatgacc 781 ctatggaggt gtcccctgtg gtgaatggag tgttcgtgtt tagcgtaatc atggacacaa 841 agccttattt acctgctggt gttcaagctc ttcctacatt tgaagagctg tttggatcat 901 attccgccgg ttacgttaat ttaagattat tgaataatca acagcatcga tatagggtat 961 tgcacagcgt gaaacgtttc gtttcatctt caggagatac taaggtatct caatttaggt 1021 ttaataagcg attgagcacc aggcgatata ctatttgggc atcattccat gatgtggatc 1081 tggtaaatgc agggggaaat tataggaaca taagcaagaa tgctattctt gtcagttatg 1141 cttttgtatc agagcattca atgtcttgta agccatttgt acaaatagaa acatcctatg 1201 tcggatgatt tatgattcat aaatctttat ggctactgcc tctatgtgct attaagcact 1261 tgtttatagt ctgttctata atgctttcaa tgtcctgttt cgacatggac tgggtttggg 1321 aaacggagtc ccctggatct agggaagctt caggtagttg gtgtagtcct ctaagtggga 1381 attctgcctc agaggcatac tgcttggagg atgaggcgtc gaggtcaatt ggttttgggc 1441 ctgtgtatct catgcttgta gagcgcccaa gtgttgattt ggtagcccat gtttcacctg 1501 gttggaccgt gatgggccga tatgtaggcc cagtgtcata atctgtgccg ggcgcattct 1561 gaatgagcct tcgaatgggc ttaggtttac caacggacca gaagtcgaca cagtcaggcc 1621 catagtcttt ggataggatt ctgatagtgg gctgtttaaa tttaatgtcc gtggaatgtt 1681 tggcagctga cagcttcagt ttagccttaa tttgggcaaa tgtgattcca tgcttgacgt 1741 ttgagtcttc aaccttatac agcagctgcc atggcacgtt atcatcaatt gaaaagtagg 1801 atgcagagaa ataatggagg tccacattac accctatggg aaatgtgaat tgggcttgat 1861 cctgttgctc atcactgagc ctagtgtccc tgatggtgac aataacagaa ccctgtgcat 1921 taaagggaac ttgattcctg tactcaatga cgacatggtc gaccttcatg catttgccca 1981 tgatacgtac ccttgttctt tcaagggtcg aaggaaattg aagtgtaatc ggcgattcat 2041 cattcgttag tttgtattct gtcctggcgg attgaatata gtcgccggag atgacaggta 2101 cagatgtatc catgttcaac actttgatta taagcttgtc aaagccacaa cacctgtctg 2161 ataagaaaca tgattaatct attgtaaaac tggccgcgca gcggaatggc tgtaattcaa 2221 gaaaaatcag aagaggttgc aacaggagaa acagagtgta gaaatataga catatatttc 2281 ctatcctatc ggaaaaatgc ttctatgtgt aatccaattc aaacagatat atatgcatac 2341 atcattaatc gatgaaggat tatatatgaa gagatatgta ccctataata acgtgaattg 2401 gatatcctct ggagtggaat gtggatagtc ttattatcaa agtggtgata taaatatgtt 2461 tgatatagtt attaaggagt tatccaacga atgatagttg acgttgttag atttgcatgt 2521 tcaaatctaa aataagtaat aacactatag tgagagaaag ttagagagag acgctctcaa 2581 ttggagacac acttgagcat gtcctcctgt aaattggaga cattatatag ttgtctctaa 2641 atggcatttt tgtaataagt tgaactttaa tttgaatgaa aaggctcaaa aggcgcagaa 2701 cacccaaggg gccaaccgta taatatt //