LOCUS KJ887630 2727 bp DNA linear VRL 24-SEP-2014 DEFINITION African cassava mosaic virus isolate CF:CF356BE:08 segment B, complete sequence. ACCESSION KJ887630 VERSION KJ887630.1 KEYWORDS . SOURCE African cassava mosaic virus ORGANISM African cassava mosaic virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 (bases 1 to 2727) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Divergent evolutionary histories of Cassava Mosaic Geminiviruses in Madagascar JOURNAL Unpublished REFERENCE 2 (bases 1 to 2727) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Direct Submission JOURNAL Submitted (23-MAY-2014) UMR PVBMT, CIRAD, 7 chemin de l'IRAT, Saint-Pierre 97410, France FEATURES Location/Qualifiers source 1..2727 /mol_type="genomic DNA" /country="Central African Republic" /segment="B" /collection_date="2008" /host="cassava" /db_xref="taxon:10817" /isolate="CF:CF356BE:08" /lat_lon="5.845 N 15.33 E" /organism="African cassava mosaic virus" /altitude="560 m" gene 438..1208 /gene="BV1" CDS 438..1208 /codon_start=1 /protein_id="AIP87619.1" /gene="BV1" /translation="MYSIRKQSRNFQRKFNSNTTNRYPIRRKYVAGHTRSCVRRRLSY EPVERPLVHNVLCEKQHGDVFNLQQNTSYTSFVTYPSRGPTGDGRSRDYIKLQSISVS GVIHAKANGNDDPMELSHVVNGVFVFSVIMDTKPYLPSGVQALPTFEELFGSYSASYV NLRLLNNQQHRYRVLHSVKRFVSSSGDTKVSQFRFNKRLSTRRYTIWASFHDVDLVNA GGNYRNISKNAILVSYAFVSEHAMSCKPFVQIETSYVG" /product="nuclear shuttle protein" gene complement(1217..2113) /gene="BC1" CDS complement(1217..2113) /codon_start=1 /protein_id="AIP87620.1" /gene="BC1" /translation="MDTSVPVISSDYIQSARTEYKLTNDESPITLQFPSTLERTRVRI MGKCMKVDHVVIEYRNQVPFNAQGSVIVTIRDTRLSDEQQDQAQFTFPIGCNVDLHYF SASYFSIDDNVPWQLLYKVEDSNVKHGITFAQIKAKLKLSAAKHSTDIKFKQPTIKIL SKDYGPDCVDFWSVGKPKPIRRLIQNEPGTDYDTGPKYRPITVQPGETWATKSTIGRS TSMRYTGSKPIDLDGSSSKQYASEAEFPLRGLHQLPEASLDPGDSVSQTQSISKQDIE SIIEQTINKCLIAHRGSSHKDL" /product="movement protein" ORIGIN 1 accggttggc cccgcccctt tttgaaatgt ggaccccgcg cactggttgg ccgcgtcccc 61 cctttgaaag ggggtccccc accttttgct ctttcctgca gatacgacgg tggtccccgc 121 atgcagatgt tgtcagctat ggatattgca tgtgtggccc acatgctaat aaatgatctg 181 cgggcctatc gaatgacagc ttgtgctact aaattatatt tagtatattg tgcatgtctc 241 tgagtttaat aaaatgatat attttattta acgtttaata ttagccattc gatattagtg 301 atttatagtc gtcaatctga caacgaccat gaaggacaat taaggctagt agcgtaattg 361 tgtatgtatt atatataggg ttgtaacata caggatttga gaatatcatt tatctgaagg 421 atatacaggg attggtaatg tatagtatca ggaagcagtc tagaaatttc caaaggaaat 481 ttaacagcaa taccacgaac aggtatccaa tcaggcgtaa gtatgtggct gggcatacta 541 gatcatgtgt taggcgaaga ttgtcatatg agccagtgga gagaccgttg gtccataatg 601 tgttgtgtga gaagcaacat ggtgatgtgt ttaatttgca gcagaacaca agttacacgt 661 catttgtaac ttatccttcc aggggaccaa cgggtgatgg gcgtagtcgg gactacatca 721 agttgcaaag tatttccgtc tcaggagtga tacatgcgaa ggctaatggc aatgatgatc 781 ctatggagtt gtctcatgtg gttaatggag tgttcgtgtt tagtgtaatc atggacacaa 841 agccttattt accttctggt gtgcaagctc ttcctacatt tgaagagctg tttggatcat 901 attccgctag ttacgttaat ttaagattat tgaataatca gcagcatcga tatagggtat 961 tgcacagcgt gaaacgtttc gtttcatcgt caggagatac taaggtatct caatttaggt 1021 ttaataagcg attgagcacc aggcgatata ctatttgggc atcattccat gatgtggatc 1081 tggtaaatgc agggggaaat tataggaaca taagcaagaa tgctattctt gtcagttatg 1141 cttttgtatc agagcatgca atgtcttgta agccatttgt acaaatagaa acatcctatg 1201 ttggatgatt tatcattcat aaatctttat ggctactgcc tctatgtgct attaagcact 1261 tgtttatagt ctgttctata atgctttcaa tgtcttgttt cgatatggac tgggtctggg 1321 aaacggagtc ccctggatct agggaagctt caggtagctg gtgtagtcct ctaagtggga 1381 attctgcctc agaggcatac tgcttcgagg atgagccgtc gaggtcaatt ggttttgagc 1441 ctgtgtatct catgcttgta gagcgcccaa ttgttgattt tgtagcccat gtctctcctg 1501 gttggaccgt gatgggccta tatttaggcc cagtgtcata atctgtgccg ggctcattct 1561 gaatgagcct tcgaatgggc ttaggttttc caacggacca aaagtcgaca cagtcaggcc 1621 catagtcttt ggatagtatt ttgatagtgg gctgtttaaa tttaatgtcc gttgaatgtt 1681 tggcagctga cagcttcagt tttgccttaa tttgggcaaa tgtgattcca tgttttacgt 1741 ttgagtcttc aaccttatac agcagctgcc atggcacgtt atcatcaatt gaaaagtagg 1801 atgcagagaa ataatggagg tccacattac accctatggg aaatgtgaat tgggcttgat 1861 cctgttgctc atcactaagc ctagtgtccc taatggtgac aataacagaa ccttgtgcat 1921 taaagggcac ttgattcctg tactcaatta cgacatggtc gaccttcatg catttgccca 1981 ttatacgtac ccttgttctc tcaagggtcg aaggaaattg tagtgtaatc ggcgattcat 2041 cattcgtcag tttgtattcc gtcctggcgg attgaatata gtcgctggag atgacaggta 2101 cagatgtatc catgttcaac actctgatta taagcttgtc aaagccacaa cacctgtctg 2161 ataagaaaca tgattaatct attgtaaaac tggccgcgca gcggaatggc tgtaattcga 2221 gataaatcag aagagtgtgc aacaggataa acagagtgta gaaatataga catatatttc 2281 ctatccaatc ggaaaaaggc ttctatgtgt aatccaattc aaacagatat atatgcatac 2341 atcattaatc gacgaaacat tagctatgaa gagataggta ccgtataata acgtgaattg 2401 gatatcctcg ggagtggaat gtggatagtc ttattatcaa agtggtgata taaatatgtt 2461 ttatatattt attaaggagt tatccaacga atgatagttg acgttgttag atttgcatgt 2521 tcaaatctaa aataagtaat tacactatag tgagagaaag ttagagagag acgctctcaa 2581 ttggagacac acttgagcat ctcctcctgt aaattggaga cattatatag tggtctctaa 2641 atggcattct tgtaataagt ggaactttaa tttgaattaa aaggctcaaa aggctcagaa 2701 cacccaaggg gccaaccgta taatatt //