LOCUS KJ887631 2726 bp DNA linear VRL 24-SEP-2014 DEFINITION African cassava mosaic virus isolate CF:CF361BN:07 segment B, complete sequence. ACCESSION KJ887631 VERSION KJ887631.1 KEYWORDS . SOURCE African cassava mosaic virus ORGANISM African cassava mosaic virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 (bases 1 to 2726) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Divergent evolutionary histories of Cassava Mosaic Geminiviruses in Madagascar JOURNAL Unpublished REFERENCE 2 (bases 1 to 2726) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Direct Submission JOURNAL Submitted (23-MAY-2014) UMR PVBMT, CIRAD, 7 chemin de l'IRAT, Saint-Pierre 97410, France FEATURES Location/Qualifiers source 1..2726 /mol_type="genomic DNA" /country="Central African Republic" /segment="B" /collection_date="13-Aug-2007" /host="cassava" /db_xref="taxon:10817" /isolate="CF:CF361BN:07" /lat_lon="6.1822 N 21.1535 E" /organism="African cassava mosaic virus" /altitude="609 m" gene 438..1208 /gene="BV1" CDS 438..1208 /codon_start=1 /protein_id="AIP87621.1" /gene="BV1" /translation="MYSIRKQSRNFQRKFNSHSTNRYPSRRKYVAGHTRPCVRRRLTY EPVERPLVHNVLCEKQHGDVFNLQQNTSYTSFVTYPSRGPSGDGRSRDYIKLQSMSVS GVIHAKANGNDDPMELSHVVNGVFVFSLIMDTKPYLPAGVQALPTFEELFGTYSACYV NLRLLNNQQHRYRVLHSVKRFVSSSGDTKVSQFRFNKRLSTRRYTTWASFHDGDLVNA GGNYRNISKNAILVSYAFVAEHSMSCKPFVQIETSYVG" /product="nuclear shuttle protein" gene complement(1217..2113) /gene="BC1" CDS complement(1217..2113) /codon_start=1 /protein_id="AIP87622.1" /gene="BC1" /translation="MDTSVPVISSDYIQSARTEYKLTNDESPITLQFPSTLERTRVRI MGKCMKVDHVVIEYRNQVPFNAQGSVIVTIRDTRLSDEQQDQAQFTFPIGCNVDLHYF SASYFSIDDNVPWQLLYKVEDSNVKNGITFAQIKAKLKLSAAKHSTDIKFKQPTIKIL SKDYGPDCVDFWSVGKPKPIRRLIQNEPGPDYDTGSRYRPITVQPGETWATKSTIGRS TSMRYTGPKPIDIDASSSRQYASEAEFPLRGLHQLPEASLDPGDSVSQTQSMSKKDIE SIIEQTVNKCLIAHRGSSHKDL" /product="movement protein" ORIGIN 1 accggttggc cccgcccccc tttaaacgtg gaccccgcgc actacgtatg tcctcgcccc 61 cgttgaaagt tggtccccca cctttttctc tttcctgcaa atacgacggt ggtccccgca 121 tgcagatatt gtcagctgtg gatagtgcat gtgtgtccca catgcaaata aatgatctgc 181 gggcctatcg aatgacagct cgtgctacta aattatattg agtatagttt tcatttctca 241 aagtttaata aaaggaaata ttgtatttaa cttttaatat tagccattcg atagtagtga 301 tttatagtcg tcaatctgac aacgaccagg aaggacaatt aaggctagca gcgtaatggt 361 ctatgtatta tatatagggt tctaacatac aggagttgga gaatatcatg taactgaatt 421 gtatacatta agttgtaatg tatagtatca ggaagcagtc gagaaatttc caaaggaaat 481 ttaacagcca tagcactaac aggtatccaa gcaggcgtaa gtatgttgcc gggcatacta 541 gaccatgtgt taggcgaaga ttgacatatg agccagtgga gagaccgttg gtccataatg 601 tgttgtgtga gaagcaacat ggtgatgtgt ttaatttgca gcagaacaca agttacacgt 661 catttgtgac gtatccgtcc aggggaccat ctggcgatgg gcgtagtcgg gattacatca 721 agttgcaaag tatgtcagtc tcgggagtga tacatgcgaa ggctaatggt aatgatgatc 781 ctatggagtt gtctcatgtg gtgaatggag tgttcgtgtt cagcttaatc atggatacaa 841 agccgtattt accagctggt gttcaagctc ttcctacatt tgaagagctt ttcggaacat 901 attccgcttg ttacgttaat ttaagattat tgaataatca acagcatcga tatagggtat 961 tgcacagtgt gaaacgtttc gtttcatctt caggagatac taaggtatct caatttaggt 1021 ttaataagcg attgagcacc aggcgatata ctacgtgggc atcatttcat gatggggatc 1081 tggtaaatgc agggggaaat tataggaaca taagcaagaa tgctattctt gtcagttatg 1141 cttttgtagc agagcactca atgtcttgta agccatttgt acaaatagaa acatcctatg 1201 ttggatgatt tattattcat aaatctttat ggctactgcc tctatgtgct attaagcact 1261 tgtttacagt ttgttctata atgctttcaa tgtccttttt cgacatggac tgggtttgtg 1321 aaacggagtc ccctggatct agggaagctt caggtagctg gtgtagccct ctaagtggga 1381 attctgcctc agaggcatac tgcctggagg aggaggcgtc gatgtcaatt ggttttgggc 1441 cggtgtatct catgcttgta gaacgcccaa tagtggattt tgtagcccat gtttctcctg 1501 gttggaccgt gatgggccta tatctagacc cagtgtcata atcggggccg ggctcattct 1561 gaatgagcct tcgaatgggc ttaggttttc caacggacca gaagtcgaca cagtcaggcc 1621 catagtcttt ggatagtatt ttgatagtgg gctgtttaaa tttaatgtcc gttgaatgtt 1681 tggcagctga cagcttcaat tttgccttaa tttgggcaaa tgtgattcca ttctttacgt 1741 ttgagtcttc aaccttatac agcagctgcc atggtacgtt atcatcaatt gaaaagtatg 1801 aggcagagaa ataatggagg tccacattgc accctatggg aaatgtgaat tgggcttgat 1861 cctgttgctc atcactgagc ctagtgtccc gaatggtaac aataacagaa ccttgtgcat 1921 taaagggcac ttgattcctg tactcaatga cgacatggtc gaccttcatg catttgccca 1981 tgatacgtac tcttgtgcgt tcaagggtcg aaggaaactg aagtgtaatc ggcgattcat 2041 cattcgtcag tttgtattct gtccttgcgg attgaatata gtcgctggag atgacaggta 2101 cagatgtatc catgttcaac actgtgagta taagcttgtc aaagccacaa cacctgtctc 2161 atgggaaaca ggattaatct attgtaaaac tggccgcgca gcggaatggc ttaaatgcaa 2221 gataaagcat aagacttggt caaaaggata aacagatggt agaaatatag acatatatat 2281 cttatcctat cggaaaaatg ctgctatgtg taatccaatt caaacaaata tatatgcata 2341 cacattagtc gatgaaacat catatattga gagagatgta cctataataa ctggaattgg 2401 atatcctcgg gaatggaatg tggatagtca tattatcaaa gtggtcatat aaatatgttt 2461 tatatattta tgaaggagtt atccaacgag ggataggtta tgttgttaga tttgcatgtt 2521 caaatctaaa ataagcaatt acactataga gagagaaagt tagagagaga cgctctcaat 2581 tggagacaca cttgagcatc tcctcctgtt aattggagac attatatagt tgtctctaaa 2641 tggcattctt gtaataagtg gaactttaat ttgaatgaaa aggctcaaaa ggctcagaac 2701 atccaagggg ccaaccgtat aatatt //