LOCUS KJ887602 2728 bp DNA linear VRL 24-SEP-2014 DEFINITION African cassava mosaic virus isolate CF:CF63BN1:07 segment B, complete sequence. ACCESSION KJ887602 VERSION KJ887602.1 KEYWORDS . SOURCE African cassava mosaic virus ORGANISM African cassava mosaic virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 (bases 1 to 2728) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Divergent evolutionary histories of Cassava Mosaic Geminiviruses in Madagascar JOURNAL Unpublished REFERENCE 2 (bases 1 to 2728) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Direct Submission JOURNAL Submitted (23-MAY-2014) UMR PVBMT, CIRAD, 7 chemin de l'IRAT, Saint-Pierre 97410, France FEATURES Location/Qualifiers source 1..2728 /mol_type="genomic DNA" /country="Central African Republic" /segment="B" /collection_date="16-Aug-2007" /host="cassava" /db_xref="taxon:10817" /isolate="CF:CF63BN1:07" /lat_lon="4.5128 N 18.4742 E" /organism="African cassava mosaic virus" /altitude="381 m" gene 437..1207 /gene="BV1" CDS 437..1207 /codon_start=1 /protein_id="AIP87563.1" /gene="BV1" /translation="MYSIRKQVRNFQRKSNSNTTNRYPIRRKYVAGHTRPCVRRRLSY EPVERPLVHNVLCEKQHGDVFNLQQNTSYTSFVTYPSRGPSGDGRSRDYIKLQSMSVS GVIHAKANGNDDPMEVSPVVNGVFVFSVIMDTKPYLPAGVQALPTFEELFGSYSASYV NLRLLNNQQHRYRVLHSVKRFVSSSGDTKVSQFRFNKRLSTRRYTIWASFHDVDLVNA GGNYRNISKNAILVSYAFVSEHSMSCKPFVQIETSYVG" /product="nuclear shuttle protein" gene complement(1216..2112) /gene="BC1" CDS complement(1216..2112) /codon_start=1 /protein_id="AIP87564.1" /gene="BC1" /translation="MDTSVPVISSDYIQSARTEYKLTNDESPITLQFPSTLERTRVRI MGKCMKVDHVVIEYRNQVPFNAQGSVIVTIRDTRLSDEQQDQAQFTFPIGCNVDLHYF SASYFSIDDNVPWQLLYKVEDSNVKHGITFAQIKAKLKLSAAKHSTDIKFKQPTIRIL SKDYGPDCVDFWSVGKPKPIRRLIQNEPGTDYDTGPKYRPITVQPGETWATKSTIGRS TSMRYTGPKPLDLDGSSSKQYASEAEFPLRGLHQLPEASLDPGDSVSQTQSMSKQDIE SIIEQTINKCLIAHRGSSHKDL" /product="movement protein" ORIGIN 1 accggttggc cccgcccctt ttgaaatgtg gaccccgcgc actggtggcc tcgtcccccc 61 tttgaaagtg ggtttcccac tgtattctct ttcctgcaaa tacgacggtg gtccccgcat 121 gcagatgttg tcagctatgg atattgcatg tgggccacac atgctaataa atgatcggcg 181 ggcctatcga atgacagctt gtgctactaa attatattta gtatattgtt catgtctctg 241 aggttaataa aatgatatat tttatttaac ttttaatatt agccattcga tattagcgat 301 ttatagtcgt caaactgaga acgatcatga aggacaatta aggctagtag cgtaattgtg 361 tatgtattat atatagggtt gtaacataca tgagtttgag aatatcattt atcgtaatta 421 tatacaggga ttggtaatgt atagtatcag gaagcaggtt agaaatttcc aaaggaaaag 481 taacagcaat accacgaaca ggtatccaat caggcgtaag tatgttgctg ggcatacgag 541 accatgtgtt aggcgaagat tgtcatatga gccagtggag agaccgttgg tccataatgt 601 gttgtgtgag aagcaacatg gtgatgtgtt taatttgcag cagaacacaa gttacacgtc 661 atttgtaact tatccttcca ggggaccatc tggtgatggg cgtagtcggg attacatcaa 721 gttgcaaagt atgtccgtct cgggagtgat acatgcgaag gctaatggca acgatgatcc 781 tatggaggtg tctcctgtgg ttaatggagt gttcgtgttt agcgtaatca tggacacaaa 841 gccttattta cctgctggtg tgcaagctct tcctacattt gaagagctgt ttggatcata 901 ttctgctagt tacgttaatt taaggttatt gaataatcaa cagcatcgat atagggtatt 961 gcacagcgtg aaacgtttcg tttcatcttc aggagatacg aaggtatctc aatttaggtt 1021 taataagcga ttgagcacca ggcgatatac tatttgggca tcattccatg atgtggatct 1081 ggtaaatgca gggggaaatt ataggaacat aagcaagaat gctattcttg tcagttatgc 1141 atttgtatca gagcattcaa tgtcgtgtaa gccatttgta caaatagaaa catcctatgt 1201 tggatgattt attattcata aatctttatg gctactgcct ctatgtgcta ttaagcattt 1261 gtttatagtc tgttctataa tgctttcaat gtcctgtttc gacatggact gggtttggga 1321 aacggagtcc cctggatcta gggaagcttc aggtagctgg tgtagtcctc taagtgggaa 1381 ttctgcctca gaggcatact gcttggagga tgagccgtcg aggtcaagtg gtttggggcc 1441 tgtgtatctc atgcttgtag agcgcccaat ggttgatttt gtagcccatg tttctcctgg 1501 ttggaccgtg atgggcctat atttaggccc agtgtcataa tctgtgccgg gctcattctg 1561 aatgagcctt cggatgggct taggtttacc aacggaccag aagtcgacac aatcaggccc 1621 atagtctttg gatagtattc ggatagtggg ctgtttaaat ttaatgtccg ttgaatgttt 1681 ggcagctgac agcttcagtt ttgccttaat ttgggcaaat gtgattccat gctttacgtt 1741 tgagtcttca accttataca gcagctgcca tggcacgtta tcatcaattg aaaagtagga 1801 tgcagagaaa taatggaggt ccacattaca ccctatggga aatgtgaatt gggcttgatc 1861 ttgttgctca tcactgagcc tagtgtccct aatggtgaca ataacagaac cctgtgcatt 1921 aaagggcact tgattcctgt actcaatgac gacatggtcg accttcatgc atttgcccat 1981 gattcgtacc cttgttcttt caagggtcga aggaaattga agtgtaatcg gcgattcatc 2041 attcgtcagc ttgtattctg tcctagcgga ttgaatatag tcgctggaga tgacaggtac 2101 agatgtatcc atgttcaaca ctctgattat aagcttgtta aagcaacaac acctgtctga 2161 taagaaacat gattaatcta ttgtaaaact ggccgcgcag cggaatggct gtaaagtcaa 2221 aataaatcag aagactctgt caacaggata aacagagtgt agaaatatag acatatattt 2281 cctatcctat cggaaaaatg ctgccatgtg taatccaatt caaacagata tatatgcata 2341 catcattaat cgatgaaaca tactatatga agagatatgt accttataat aacgtgaaat 2401 ggatatcctc tggagtggaa tgtggatagt cttattatta aagtggtgat ataaatatgt 2461 tttatatagt tattaaggag ttatccaacg aatgataggt gacgtggtta gatttgcatg 2521 ttcaaatcta aaataagtat gtacactata gtgagagaaa gttagagaga gacgctctca 2581 attggagaca cacttgagca tctcctcctg taaattggag acattatata gttgtctcta 2641 aatggcattc ttgtaataag tggaacttta atttgaaata aaaggctcaa aaggctcaga 2701 acacccaagg ggccaaccgt ataatatt //