LOCUS FN668378 2780 bp DNA circular VRL 17-FEB-2010 DEFINITION African cassava mosaic virus segment A, isolate DRC 6. ACCESSION FN668378 VERSION FN668378.1 KEYWORDS complete viral segment, complete genome. SOURCE African cassava mosaic virus ORGANISM African cassava mosaic virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 AUTHORS Naseem,S. and Winter,S. TITLE African cassava mosaic virus (ACMV) and East African cassava mosaic virus (EACMV-UG) in single and mixed infected cassava (Manihot esculenta Crantz) JOURNAL Unpublished REFERENCE 2 (bases 1 to 2780) AUTHORS Winter,S. TITLE Direct Submission JOURNAL Submitted (13-FEB-2010) Winter S., Plant Virus Department, DSMZ, Messeweg 11/12, 38104, GERMANY FEATURES Location/Qualifiers source 1..2780 /mol_type="genomic DNA" /country="Democratic Republic of the Congo:Yangambi" /collected_by="Winter S" /identified_by="Winter S" /segment="A" /collection_date="2003" /host="Manihot esculenta" /db_xref="taxon:10817" /isolate="DRC 6" /organism="African cassava mosaic virus" gene 135..476 /gene="AV2" CDS 135..476 /db_xref="GOA:D3HUQ9" /db_xref="InterPro:IPR002511" /db_xref="InterPro:IPR005159" /db_xref="UniProtKB/TrEMBL:D3HUQ9" /codon_start=1 /protein_id="CBJ57258.1" /gene="AV2" /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLVRD LVSVIRARKYVEATRRYHHFHSRLQGSTKTELRQPIQEPCYCPHCPRHKSKTGLEEQA HVQKAHDVQDV" /product="precoat protein" gene 295..1071 /gene="AV1" CDS 295..1071 /db_xref="GOA:D3HUR0" /db_xref="InterPro:IPR000263" /db_xref="InterPro:IPR000650" /db_xref="UniProtKB/TrEMBL:D3HUR0" /codon_start=1 /protein_id="CBJ57259.1" /gene="AV1" /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRA WRNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGL THRVGKRFCIKSIYILGKIWMDENIKKQNHTNNVIFYLLRDRRPYGNAPQDFGQIFNM FDNEPSTATIKNDLRDRFQVLRKFHATVVGGPSGMKEQALVKRFYRLNHHVTYNHQEA GKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN" /product="coat protein" gene complement(1068..1472) /gene="3" CDS complement(1068..1472) /db_xref="InterPro:IPR000657" /db_xref="UniProtKB/TrEMBL:D3HUR1" /codon_start=1 /protein_id="CBJ57260.1" /gene="3" /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHHQRPFLLNQD IITVQVRFNHNLRKELGIHKCFLNFKIWTTLQPQTGLFLRVFRYQVLIYLDNMGVISI NHVIRAADHVLFNVIAKTIECQLTHEIKFNVY" /product="REn" gene complement(1213..1620) /gene="2" CDS complement(1213..1620) /db_xref="GOA:D3HUR2" /db_xref="InterPro:IPR000942" /db_xref="UniProtKB/TrEMBL:D3HUR2" /codon_start=1 /protein_id="CBJ57261.1" /gene="2" /translation="MQSSSPSQNHSSQVPIKVSHRQFKKRAIRRRRVDLVCGCSYYLH INCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNHQAPPTTIPAEPGHNNSPGSIQ SQPAEGAGDSQMFSQLQDLDDLTASDWSFLKGL" /product="TraP" gene complement(1529..2605) /gene="1" CDS complement(1529..2605) /db_xref="GOA:D3HUR3" /db_xref="InterPro:IPR001191" /db_xref="InterPro:IPR001301" /db_xref="InterPro:IPR022690" /db_xref="InterPro:IPR022692" /db_xref="UniProtKB/TrEMBL:D3HUR3" /codon_start=1 /protein_id="CBJ57262.1" /gene="1" /translation="MRNPRFRIQAKNVFLTYPKCSIPKEHLLSFIQTLSLPSNPKFIK ICRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPGCSTSFHPNIQGAKSSSDVKSY LDKDGDTVEWGQFQIDGRSARGGQQSANDAYAKALNSGSKSGALNVIREFVPKDFVLQ FHNLSSNLDRIFQEPPAPYVSPFLCSSFDQVPVEIEEWVADNVRDSAARPWRPNSIVI EGDSRTGKTIWARSLGPHNYLCGHLDLSPKVFNNAAWYNVIDDVDPHYLKHFKEFMGS QRDWQSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQAALKAWALKNAIFIT LTEPLFSGSDQSQSQTIQETSHPA" /product="replication protein" gene complement(2161..2571) /gene="4" CDS complement(2161..2571) /db_xref="InterPro:IPR002488" /db_xref="UniProtKB/TrEMBL:D3HUR4" /codon_start=1 /protein_id="CBJ57263.1" /gene="4" /translation="MYFSHTQSVLYPKNTYYHSFKHSLSHQTLSSLKSVENYIRMGNL TCMPSSNSKVKSRLRTIVSSIVYTQAVAPVSTPTFKVPNQAQMSSPIWIRTETPSNGD NFKSMADLLEAVNNQRMMLTPKRLTAAVSRELLM" /product="transcriptional regulator AC4" ORIGIN 1 accggttggc cccgccccct ttaaacgtgg tccccgcgca ctacgtatgt cggccaatca 61 tgggatagct gtaaaggtta gttagtagtg gtgggccact atatacttgc aggcgaagtt 121 gtagctagtg cgcaatgtgg gatccactgg tgaatgagtt tccagactcg gtgcatgggc 181 ttaggtgtat gcttgcaatt aaatatttgc aggccttaga ggatacatac gagcccagta 241 ccttgggcca cgatctggtt agggatctag tctcagttat cagggctcgt aagtatgtcg 301 aagcgaccag gagatatcat catttccact ccaggctcca aggttcgacg aagactgaac 361 ttcgacagcc catacaggaa ccgtgctact gcccccactg tccacgtcac aaatcgaaaa 421 cgggcctgga ggaacaggcc catgtacaga aagcccatga tgtacaggat gtatagaagc 481 ccagacatac cgaggggctg tgaaggccca tgtaaggtcc agtcgtttga gcagagggat 541 gatgtgaagc atcttggtat ctgtaaggtg attagtgatg ttacgcgtgg gcctggactg 601 acacacaggg tcggaaagag gttttgtatc aagtccattt acattcttgg taagatctgg 661 atggatgaaa atattaagaa gcagaatcac actaataatg tgatttttta cctgctaagg 721 gatagaaggc cttatggcaa tgcgccccaa gactttgggc agatatttaa catgtttgat 781 aatgagccca gtactgcaac aattaagaac gatttgaggg ataggtttca ggtgttgagg 841 aaatttcatg ccacagttgt tggtggtcca tctggcatga aggagcaggc gttggttaaa 901 aggttttaca ggctgaatca tcacgttaca tataatcatc aggaggcagg gaagtatgat 961 aatcacacgg agaatgcatt gcttctgtac atggcatgta ctcatgcctc caatcctgta 1021 tatgcgacgt tgaaaatacg tatatacttc tatgacagta ttggcaatta ataaacattg 1081 aattttattt catgagtcaa ctgacactca atagtttttg caattacatt gaataaaaca 1141 tgatcagcag ctctaattac atggttaatt gagataacac ccatattatc caagtatata 1201 agtacttggt atctaaagac ccttaagaaa agaccagtct gaggctgtaa ggtcgtccaa 1261 atcttgaagt tgagaaaaca tttgtgaatc cccagctcct tccgcaggtt gtgattgaat 1321 cgaacctgga ctgttattat gtcctggttc agcaggaatg gtcgttggtg gtgcctggtg 1381 attgtgaaat acaggggatt gtttatttcc caggtataca cgccattcat tgcttgagga 1441 gcagtgatga gttcccctgt gcgtaaatcc atgattggag cagttgatat ggaggtaata 1501 tgaacagcca cagacaagat cgactctcct acgccggatg gctcgtttct tgaattgtct 1561 gtgactgact ttgatcggaa cctgagaaga gtggttctgt gagggtgatg aagattgcat 1621 tctttaaggc ccaggccttt agcgctgctt gcttttcctc gtcgaggaac tctttatagg 1681 acgaggtagg tcctggattg cagaggaaga tagtgggaat tccaccttta atttgaacgg 1741 gtttcccgta tttcgtgttg gactgccagt ccctctggga ccccatgaac tccttaaagt 1801 gttttaggta gtggggatcg acgtcatcaa tgacgttgta ccatgcagca ttattgaaga 1861 cctttggact aaggtccagg tgtccacaca ggtaattatg tgggcctaaa gatctggccc 1921 atatcgtttt ccctgttctg ctatcacctt ctatgacaat actattaggt ctccatggcc 1981 gcgcagcgga atccctaaca ttatcagcga cccattcttc aatttcaaca ggaacttggt 2041 caaaggaaga acataggaag ggagaaacat aaggagctgg tggctcctgg aaaatcctat 2101 ctaaattact acttagatta tgaaactgaa gtacaaagtc ctttgggacg aattccctaa 2161 ttacattaag agctcccgac ttactgccgc tgttaagcgc tttggcgtaa gcatcattcg 2221 ctgattgttg accgcctcta gcagatcggc catcgatttg aaattgtccc cattcgacgg 2281 tgtctccgtc cttatccaga taggacttga catctgagct tgatttggca ccttgaatgt 2341 tggggtggaa actggtgcta cagcctgggt gtacacaatc gaagagacga ttgttcgtaa 2401 tcgtgatttt accttcgaat tggatgaggg catgcaagtg aggttcccca ttctgatgta 2461 gttctctaca gattttaatg aacttagggt ttgatgggag agagagtgtt tgaatgaatg 2521 atagtaggtg ttctttgggt atagaacact ttgggtatgt gagaaataca ttcttggctt 2581 gaattctaaa acgaggattt ctcattttga ccaggtcaat tggagacact caactagaga 2641 cactcttgag catctcctcc agttaattgg agacaatata taggtgtctc taaatggcat 2701 tctggtaata agttgaactt taatttgaat taaaagtctc aaaaggctca gaacgcccaa 2761 ggggccaacc gtataatatt //