LOCUS KJ887692 2740 bp DNA linear VRL 24-SEP-2014 DEFINITION African cassava mosaic virus isolate MG:MG312A5:10 segment B, complete sequence. ACCESSION KJ887692 VERSION KJ887692.1 KEYWORDS . SOURCE African cassava mosaic virus ORGANISM African cassava mosaic virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 (bases 1 to 2740) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Divergent evolutionary histories of Cassava Mosaic Geminiviruses in Madagascar JOURNAL Unpublished REFERENCE 2 (bases 1 to 2740) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Direct Submission JOURNAL Submitted (23-MAY-2014) UMR PVBMT, CIRAD, 7 chemin de l'IRAT, Saint-Pierre 97410, France FEATURES Location/Qualifiers source 1..2740 /mol_type="genomic DNA" /country="Madagascar" /segment="B" /collection_date="05-May-2010" /host="cassava" /db_xref="taxon:10817" /isolate="MG:MG312A5:10" /lat_lon="18.9602 S 46.8182 E" /organism="African cassava mosaic virus" /altitude="1215 m" gene 433..1203 /gene="BV1" CDS 433..1203 /codon_start=1 /protein_id="AIP87741.1" /gene="BV1" /translation="MYSTRKQSRNFQRKFNSNTTNRYPIRRKYGAGHTRPCVRRRLSY EPVERPLVHNVLCEKQHGDVFNLQQNTSYTSFVTYPSRGSSGDGRSRDYIKLQSMSVS GVIHAKANGNDDPMEFAHVVNGVFVFSLIMDTKPYLPAGVQALPTFEELFGPYSACYV NLRLLNNQQHRYRVLHSVKRFVSSSGDTKVSQFRFNKRLSTRRYTIWASFHDGDLGNA GGNYRNISKNAILVSYAFVSEHSMSCDPFVQIETSYVG" /product="nuclear shuttle protein" gene complement(1212..2108) /gene="BC1" CDS complement(1212..2108) /codon_start=1 /protein_id="AIP87742.1" /gene="BC1" /translation="MNTSVPVISGDYIQSARTEYKLTNDESPITLQFPSTLERTRVRI MGKCMKVDHVVIEYRNQVPFNAQGSVIVTIRDTRLSDEQQDQAQFTFPIGCNVDLHYF SASYFSIDDNVPWQLLYKVEDSNVKNGITFAQIKAKLKLSAAKHSTDIKFKQPTIKIL SKDYGPDCVDFWSVGKPKPIRRLIQNEHGTDYDTGPKYRPITVHPGETWATKSTIGRS SSMRYTSPKPIVIDASSSRQYASEAEFPFRGLHQLPEASLDPGDSVSQTQSMSKKDIE SIIEQTVNKCLIAHRGSSHKDL" /product="movement protein" ORIGIN 1 accggttggc cccgcccccc tttaaacgtg gaccccgcgc actggtgacc ccaccccttt 61 gaaacgtggt cccctacctg tttctttgtc ctgcgtatac gacggtggtc cccacatgca 121 ggtgttgtct gccatggata ttgcatgtgg gacccacatg caaataaatg atctgctggc 181 ctatcgaatg acagcttgtg ctactaaatt atatttagta tatgttcagt tctctgagtt 241 taataaaatg gtatatgtta tttagctttg aatattagcc attcgatatt agtgatttat 301 gttcatcaat ctgacaacga ccaagaatga caattaaggc tagtagcgta attgttgatg 361 tattatatat agtgttctaa catacaggag attgtgaata tcagttatcg gaattatata 421 cagttatctg taatgtatag taccaggaag cagtctagaa atttccaaag gaaatttaac 481 agcaacacca caaacaggta tccaatcagg cgtaagtatg gtgctgggca tactagacca 541 tgtgttaggc gaagattgtc atatgagcca gtggagagac cgttggtcca taatgtgttg 601 tgtgagaagc aacatggtga tgtgtttaat ttgcagcaga acacaagtta tacgtcattt 661 gtgacttatc cttccagggg atcatctggg gatgggcgta gtcgggatta catcaagttg 721 caaagtatgt ctgtctcggg agtgatacat gcgaaggcta atggcaatga tgatcctatg 781 gagtttgctc atgttgttaa tggagtgttc gtgtttagct taatcatgga cacaaagcct 841 tatttacctg ctggtgttca agctcttcct acatttgaag agctgtttgg accatattca 901 gcgtgttacg ttaatttaag attattgaat aatcaacagc atcgatatag ggtattgcac 961 agcgtgaaac gtttcgtttc atcttcagga gatactaagg tatctcaatt taggtttaat 1021 aagcgattaa gcaccaggcg atatactatt tgggcatcat tccatgatgg ggatctggga 1081 aatgcaggtg gaaattatag gaatataagc aagaatgcta ttcttgtcag ttatgctttt 1141 gtatcagagc attcaatgtc ttgtgatcca tttgtacaaa tagaaacatc ctatgttgga 1201 tgagttatta ttcataaatc tttatggcta ctgcctctat gtgctattaa gcacttgttt 1261 acagtttgtt ctataatgct ttcaatgtcc tttttcgaca tggactgtgt ttgtgaaact 1321 gagtcccctg gatctaggga agcttcaggt agctggtgta gtcctctaaa tgggaattct 1381 gcctcagatg catactgcct ggaggatgag gcgtcgatga caattggttt tgggcttgtg 1441 tatctcatgc ttgaagatcg cccaattgtg gattttgtag cccatgtttc tcctggatgg 1501 accgtaatgg gcctatattt aggcccagtg tcataatctg tgccgtgctc attttgaatg 1561 agccttcgaa tgggcttagg ttttccaacg gaccagaagt ctacacagtc aggcccatag 1621 tctttggata gtatttttat agtgggctgt ttaaatttaa tgtctgtgga atgtttggca 1681 gctgacagct tcagttttgc cttaatttgg gcaaatgtga ttccattttt tacgtttgaa 1741 tcttcaacct tatatagcag ctgccatggt acgttatcat caattgaaaa gtatgatgca 1801 gagaaataat ggaggtccac attacaccct atgggaaatg tgaattgggc ttgatcctgt 1861 tgctcatcac tgagcctagt gtccctaatg gtaacaataa cagaaccttg tgcattaaat 1921 ggcacttgat tcctgtactc aatgacgaca tggtctacct tcatgcattt gcccatgata 1981 cgtacccttg ttctttcaag ggtcgaagga aattgaagtg taatcggcga ttcatcattc 2041 gtcagtttgt attctgtcct tgctgattga atatagtcgc cggagatgac aggtacagat 2101 gtattcatgt tcaacactgt gattataagc ttgtcaaagc cacaacacct gtcacataat 2161 aaacatgatg aatctatttg aaaactggcc gcgcagcgga atggctttaa ttcaagagaa 2221 atcagaagct tttgtcaaca ggaaataatt ttcaacatga gaaacagaat ttagaaatat 2281 agacatatat ttcttatccg atcggaaaaa agcttctatg tgtaatccaa ttcaaacata 2341 tatatagtca tacagcatta gttgagtaaa cattatatat ttagagatat gtaccttata 2401 ataacttgaa ttggatatcg tcttgagtgg aatgtggata gtcttattat caaagtggtc 2461 atataaatat gttttatata tttattaagg agttatccaa cgagtgatag cttacgttgt 2521 cagatttgca tgttcaaatc taaaataagc aattacacta tagtgagaga aagttagaga 2581 gagacgctct caactggaga cactcttgag catctcctcc tgttaattgg agacattata 2641 tagttgtctc taaatggcat tcttgtaata agtggaactt taatttgaat gaaaaggctc 2701 aaaaggctca gaacgcccaa ggggccaacc gtataatatt //