LOCUS KJ887707 2739 bp DNA linear VRL 24-SEP-2014 DEFINITION African cassava mosaic virus isolate MG:MG349B1:11 segment B, complete sequence. ACCESSION KJ887707 VERSION KJ887707.1 KEYWORDS . SOURCE African cassava mosaic virus ORGANISM African cassava mosaic virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 (bases 1 to 2739) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Divergent evolutionary histories of Cassava Mosaic Geminiviruses in Madagascar JOURNAL Unpublished REFERENCE 2 (bases 1 to 2739) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Direct Submission JOURNAL Submitted (23-MAY-2014) UMR PVBMT, CIRAD, 7 chemin de l'IRAT, Saint-Pierre 97410, France FEATURES Location/Qualifiers source 1..2739 /mol_type="genomic DNA" /country="Madagascar" /segment="B" /collection_date="23-May-2011" /host="cassava" /db_xref="taxon:10817" /isolate="MG:MG349B1:11" /lat_lon="18.2994 S 48.2690 E" /organism="African cassava mosaic virus" /altitude="907 m" gene 432..1202 /gene="BV1" CDS 432..1202 /codon_start=1 /protein_id="AIP87771.1" /gene="BV1" /translation="MYSIRKQSRNFQRKFNSNTTNRYPIRRKYGAGHTRPCVRRRLSY EPVERPLVHNVLCEKQHGDVFNLQQNTSYTSFVTYPSRGSSGDGRSRDYIKLQSMSVS GVIHAKANGNDDPMEFSHVVNGVFVFSLIMDTKPYLPAGVQALPTFEELFGPYSACYV NLRLLNNQQHRYRVLHSVKRFVSSSGDTKVSQFRFNKRLSTRRYTIWASFHDGDLGNA GGNYRNISKNAILVSYAFVSEHSMSCDPFVQIETSYVG" /product="nuclear shuttle protein" gene complement(1211..2107) /gene="BC1" CDS complement(1211..2107) /codon_start=1 /protein_id="AIP87772.1" /gene="BC1" /translation="MDTSVPVISGDYIQSARTEYKLTNDESPITLQFPSTLERTRVRI MGKCMKVDHVVIEYRNQVPFNAQGSVIVTIRDTRLSDEQQDQAQFTFPIGCNVDLHYF SASYFSIDDNVPWQLLYKVEDSNVKYGITFAQIKAKLKLSAAKHSTDIKFKQPTIKIL SKDYGPDCVDFWSVGKPKPIRRLIQNEHGTDYDTGPKYRPITVHPGETWATKSTIGRS SSMRYTGPKPIDIDASSSRQYASEAEFPLRGLHQLPEASLDPGDSVSQTQSMSKKDIE SIIEQTVNKCLIAHRGSSHKDL" /product="movement protein" ORIGIN 1 accggttggc cccgcccccc tttaaatgtg gaccccgcgc actggtgact ccgccctttt 61 taaacgtggt ccgccaacct ttttcgttgt cctgtgttta cgacggtggt ccccacatgc 121 aggtgttgtc ggccattgat attgcatgtg tgtcccacat gcaaataaat gatctgctgg 181 cctttcgaat gacagcttgt gttactaaat tatatttagt atatgttcat tcctctgagt 241 ttaataaaat ggtatatgtt atctagcttt taatattagc cattcgatat tagtgattta 301 tgttcatcaa tctgacaacg accaggaagg acaattaagg ctggtagcgt aattgttgat 361 gtattatata tagtgttcaa catacaggag attgtgaata gcagttatcg gaattataac 421 agttatttgt aatgtatagt atcaggaagc agtctagaaa tttccaaagg aaatttaaca 481 gcaacaccac aaacaggtat ccaatcaggc gtaagtatgg tgccgggcat actagaccat 541 gtgttaggcg aagattgtca tatgagccag tggagagacc attggtccat aatgtgttgt 601 gtgagaagca acatggtgat gtgtttaatt tgcagcagaa cacaagttat acgtcatttg 661 tgacttatcc ttccagggga tcatctggtg atgggcgtag tcgggattac atcaagttgc 721 aaagtatgtc cgtctcggga gtgatacatg cgaaggctaa tggcaatgat gatcctatgg 781 agttttctca tgttgttaat ggagttttcg tgtttagctt aatcatggac acaaagcctt 841 atttacctgc gggtgttcaa gctcttccta catttgaaga gctgtttgga ccatattcag 901 cgtgttacgt taatttaaga ttattgaata atcaacagca tcgatatagg gtattgcaca 961 gcgtgaaacg tttcgtttca tcttcaggag atactaaggt atctcaattt aggtttaata 1021 agcgattaag caccaggcga tatactattt gggcatcatt ccatgatggg gatctgggaa 1081 atgcaggtgg aaattatagg aatataagca agaatgctat tcttgtcagt tatgcttttg 1141 tatcagaaca ttcaatgtct tgtgatccat ttgtacaaat agaaacatcc tatgttggat 1201 gatttattat tcataaatct ttatggctac tgcctctatg tgctattaag cacttgttta 1261 cagtttgttc tataatgctt tcaatgtcct ttttcgacat ggactgtgtt tgtgaaactg 1321 agtcccctgg atctagggaa gcttcaggta gctggtgtag tcctctaagt gggaattctg 1381 cctcagatgc atactgcctg gaggacgagg cgtcgatgtc aattggtttt gggcctgtgt 1441 atctcatgct tgaagatcgc ccaattgtgg atttggtagc ccatgtttct cctggatgga 1501 ccgtaatggg cctatattta ggcccagtgt cataatctgt gccgtgctca ttctgaatga 1561 gccttcgaat gggcttaggt tttccaacgg accagaagtc tacacagtca ggcccatagt 1621 ctttggatag tatttttata gtgggctgtt taaatttaat gtctgtggaa tgtttggcag 1681 ctgacagctt cagttttgcc ttaatttggg caaatgtgat gccatatttt acgtttgaat 1741 cttcaacctt atacagcagc tgccatggta cgttatcatc aattgaaaag tatgatgcag 1801 agaaataatg gaggtccaca ttacacccta tgggaaatgt gaattgggct tgatcctgtt 1861 gctcatcact gagcctagtg tcccttatgg taacaataac agaaccttgt gcattaaatg 1921 gcacttgatt cctgtactca atgacgacat ggtctacctt catgcatttg cccatgatac 1981 gtacccttgt tctttcaagg gtcgaaggaa attgaagtgt aatcggcgat tcatcattcg 2041 tcagtttgta ttctgtcctg gctgattgaa tatagtcgcc ggagatgaca ggtacagatg 2101 tatccatgtt caacactgtg attataagct tgtcaaagcc acaacacctg tcacatgata 2161 aacatgatga atatattaga aatctggccg cgcagcggaa tggctttaat tcaagataaa 2221 tcagaagatt tagtcaacag gaaataattt tcaacaggag aaacagattt tagaaatata 2281 gacatatatt tcttatccta ttggaaaaaa gcttctatgt gtaatccaat tcaaacatat 2341 atatagtcat acagcattag ttgagtaaac attatatatt tagagatatg taccttataa 2401 taacttgaat tggatatcgt cttgagtgga atgtggatag tcttattatg aaagtggtca 2461 tataaatatg ttttatatat ttattaagga gttatccaac gagtgatagc ttacgtcgtc 2521 agatttgcat gttcaaatct aaaataagca attacaccat agtgagagaa agttagagag 2581 agacgctctc aactggagac actcttgagc atctcctcct gttaattgga gacattatat 2641 agttgtctct aaatggcatt cttgtaataa gtggaacttt aatttgaatg aaaaggctca 2701 aaaggctcac aacgcccaag gggccaaccg tataatatt //