LOCUS KJ887743 2738 bp DNA linear VRL 24-SEP-2014 DEFINITION African cassava mosaic virus isolate MG:MG648B2:11 segment B, complete sequence. ACCESSION KJ887743 VERSION KJ887743.1 KEYWORDS . SOURCE African cassava mosaic virus ORGANISM African cassava mosaic virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 (bases 1 to 2738) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Divergent evolutionary histories of Cassava Mosaic Geminiviruses in Madagascar JOURNAL Unpublished REFERENCE 2 (bases 1 to 2738) AUTHORS Hoareau,M., Harimalala,M., Zinga,I., De Bruyn,A., Lett,J.-M. and Lefeuvre,P. TITLE Direct Submission JOURNAL Submitted (23-MAY-2014) UMR PVBMT, CIRAD, 7 chemin de l'IRAT, Saint-Pierre 97410, France FEATURES Location/Qualifiers source 1..2738 /mol_type="genomic DNA" /country="Madagascar" /segment="B" /collection_date="04-Jul-2011" /host="cassava" /db_xref="taxon:10817" /isolate="MG:MG648B2:11" /lat_lon="13.7120 S 48.4255 E" /organism="African cassava mosaic virus" /altitude="31 m" gene 432..1202 /gene="BV1" CDS 432..1202 /codon_start=1 /protein_id="AIP87842.1" /gene="BV1" /translation="MYSSRKQSRNFQRKLNSNTTNRYPIRRKYGAGHTRLCVRRRLSY EPVERPLVHNVLCEKQHGDVFNLQQNTSYTSFVTYPSRGSSGDGRSRDYIKLLSMSVS GVIHAKANGNDDPMEISPVVNGVFVFSLIMDTKPYLPAGVQALPTFEELFGPYSACYV NLRLLNNQQHRYRVLHSVKRFVSSSGDTKVSQFRFNKRLSTRRYTIWASFHDGDLGNA GGNYRNVSKNAILVSYAFVSEHSMSCDPFVQIETSYVG" /product="nuclear shuttle protein" gene complement(1211..2107) /gene="BC1" CDS complement(1211..2107) /codon_start=1 /protein_id="AIP87843.1" /gene="BC1" /translation="MDTSVPVISGDYIQSARTEYKLTNDESPITLQFPSTLERTRVRI MGKCMKVDHVVIEYRNQVPFNAQGSVIVTIRDTRLSDEQQDQAQFTFPIGCNVDLHYF SASYFSIDDNVPWQLLYKVEDSNVKNGITFAQIKAKLKLSAAKHSTDIKFKQPTIKIL SKDYGPDCVDFWSVGKPKPIRRLIQNEHGTDYDTGPKYRPITVHPGETWATKSTIGRS SSMRYTGPKPIDIDASSSRQYASEAEFPLRGLHQLPEASLDPGDSVSQTQSMSKKDIE SIIEQTVNKCLIAHRGSSHKDL" /product="movement protein" ORIGIN 1 accggttggc cccgcctcct ttaaacgtgg accccgcgca ctggtgaccc cgccccttgt 61 gaacgtggtc cccctacctt tgctttgtcc tgcgtgtacg acggtggtcc ccacatgcag 121 gtgttgtctg ccattgatat tgcatgtgtg tcccacatgc aaataaatga tctgctggcc 181 tatcgaatga cagcttgtgc tactaaatta tatttagtat atgttcagtc ctctgagtct 241 aaaaaaatgg tatatgtcac ttagcggtta acattagcca ttcgatagta gtgatatatg 301 ttcagcaatc tgacaacgac caagaaggac aattaaggcg agtagcgtaa ttgtttatgt 361 agtatatata gtgttctaac atacaggaga tcgtgaatag cagttatcgg aatcatatac 421 agttagctgt aatgtatagt agcaggaagc agtctagaaa tttccaaagg aaattgaaca 481 gcaacaccac aaacaggtat ccaatcaggc gtaagtatgg tgctgggcat acgagattat 541 gtgttaggcg aagattgtca tatgagccag tggagagacc gttggtccat aatgtgttgt 601 gtgagaagca acatggtgat gtgtttaatt tgcagcagaa cacaagttat acgtcatttg 661 tgacttatcc ttccaggggg tcatctggtg atgggcgtag tcgggattac atcaagttgc 721 taagtatgtc tgtttcggga gtgatacatg cgaaggctaa tggcaatgat gatcctatgg 781 agatttctcc tgttgttaat ggagtgttcg tgtttagctt aatcatggac acaaagcctt 841 atttacctgc tggtgtgcaa gctcttccta catttgaaga gctgtttgga ccatattcag 901 cttgttacgt taatttaaga ctattgaata atcaacagca tcgatatagg gtattgcaca 961 gcgtgaaacg tttcgtttca tcttcaggag atactaaggt atctcaattt aggtttaata 1021 agcgattaag caccaggcga tatactattt gggcatcatt ccatgatggg gatctgggaa 1081 atgcaggtgg aaattatagg aatgtaagca agaatgctat tcttgtcagt tatgcttttg 1141 tatcagagca ttcaatgtct tgtgatccat ttgtacaaat agaaacatcc tatgttggat 1201 gatgtattat tcataaatct ttatggctac tgcctctatg tgctattaag cacttgttta 1261 cagtttgttc tataatgctt tcaatgtcct ttttcgacat ggactgtgtt tgtgaaactg 1321 agtcccctgg atctagggaa gcttcaggta gctggtgtag tcctctaagt gggaattctg 1381 cctcagatgc atactgcctg gaggatgagg cgtcgatatc aatcggtttt gggccggtgt 1441 atcgcatgct tgaagatctc ccaattgtgg attttgtagc ccatgtttcg cctggatgga 1501 ccgtaatggg cctatattta ggcccagtgt cataatctgt gccgtgctca ttctgaatga 1561 gccttcgaat gggcttaggt ttcccaacgg accagaagtc tacacagtca ggcccatagt 1621 ctttggatag tatttttata gtgggctgtt taaatttaat gtccgtggaa tgtttggcag 1681 ctgacagctt cagttttgcc ttaatttggg caaatgtgat tccatttttt acgtttgaat 1741 cttcaacctt atacagcagc tgccatggta cgttatcatc aattgaaaag tatgatgcag 1801 agaaataatg gaggtccaca ttacacccta tgggaaatgt gaattgggct tgatcctgtt 1861 gctcatcact gagtctagtg tccctaatgg taacaataac agaaccttgt gcattaaatg 1921 gcacttgatt cctgtactca atgacgacat ggtctacctt catgcatttg cccatgatac 1981 gtacccttgt tctttcaagg gtcgaaggaa attgaagtgt aatcggcgat tcatcattcg 2041 tcagtttgta ttctgtccgt gctgactgaa tatagtcgcc ggagatgaca ggtacagatg 2101 tatccatgtt caacactgtg attataaact tgtcaaagcc acaacacctg tcacaggata 2161 aacatgatga atctattgga aaactggccg cgcagcggaa tggcgttaat gcaagagaaa 2221 tcagaagaat gtgtcaacag gaaataattg ccaacaggag aaacagatgg tagaaatata 2281 gacatatatt tcttattcta ttggaaaaaa gcgactatgt gtaatccaat tcaaacagct 2341 atataccaag atagaatttg ttgaggaaac attacatatt tagagaaatg taccttataa 2401 taacgtgaat tggatatcgc ttgagtggaa tgtggatact cttattatca aagtgggcat 2461 ataaatacgt gttatatatt tattaaggag ttatccaacg agggatagct tacgtggaca 2521 gatgtgcatg ttcaaatcta aaataagcaa tgacactata gtgagagaaa gttagagaga 2581 gacgctctca actggagaca ctcttgagca tctcctcccg ttaattggag acattatata 2641 gttgtctcta aatggcattc ttgtaataag tggaacttta atttgaatga aaaggcgcaa 2701 aaggctcaga acgcccaagg ggccaaccgt ataatatt //