LOCUS AJ427910 2781 bp DNA circular VRL 15-APR-2005 DEFINITION African cassava mosaic virus-[Nigeria-Ogo] AC1 gene, AC2 gene, AC3 gene, AC4 gene, AV2 gene and AV1 gene. ACCESSION AJ427910 VERSION AJ427910.1 KEYWORDS AC1 gene; AC2 gene; AC4 gene; AV1 gene; AV2 gene; coat protein; replication enhancer protein; replication-associated protein; transcriptional activator protein: AC3 gene. SOURCE African cassava mosaic virus-[Nigeria-Ogo] ORGANISM African cassava mosaic virus-[Nigeria-Ogo] Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 (bases 1 to 2781) AUTHORS Briddon,R.W. TITLE Direct Submission JOURNAL Submitted (12-JAN-2002) Briddon R.W., Department of Disease and Stress Biology, John Innes Centre, Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM FEATURES Location/Qualifiers source 1..2781 /mol_type="genomic DNA" /country="Nigeria" /lab_host="Nicotiana benthamiana" /host="Manihot esculenta" /db_xref="taxon:222074" /clone="APA9" /isolate="Ogoroco" /organism="African cassava mosaic virus-[Nigeria-Ogo]" gene 136..477 /gene="AV2" CDS 136..477 /db_xref="InterPro:IPR002511" /db_xref="InterPro:IPR005159" /db_xref="UniProtKB/TrEMBL:Q8V6Z8" /codon_start=1 /protein_id="CAD20823.1" /gene="AV2" /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLVRD LVSVIRARNYVEATRRYHHFHSRLEGSSKAELRQPIQEPCYCPHCPRHKSKTGLDKQA HVQKAHNVQDV" /product="AV2 protein" gene 296..1072 /gene="AV1" CDS 296..1072 /db_xref="GOA:Q8V6Z7" /db_xref="InterPro:IPR000263" /db_xref="InterPro:IPR000650" /db_xref="UniProtKB/TrEMBL:Q8V6Z7" /codon_start=1 /protein_id="CAD20824.1" /gene="AV1" /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRA WINRPMYRKPTMYRMYRSPDIPRGCEGPCKVQSYEQRDDVKHLGICKVISDVTRGPGL THRVGKRFCIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNAPQDFGQIFNM FDNEPSTATIKNDLRDRFQVLRKFHATVIGGPSGMKEQALVKRFYRLNHHVTYNHQEA GKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN" /product="coat protein" gene complement(1069..1473) /gene="AC3" CDS complement(1069..1473) /db_xref="InterPro:IPR000657" /db_xref="UniProtKB/TrEMBL:Q8V6Z6" /codon_start=1 /protein_id="CAD20825.1" /gene="AC3" /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHQQRPFLLNQD IITVQVRFNHNLRKELGIHKCFLNFRIWTTLRPQTGLFLRVFRYQVLKYLDNIGVISI NDVIRAADHVLFNVIAKTIECQLTHEIKFNVY" /product="replication enhancer protein" gene complement(1214..1621) /gene="AC2" CDS complement(1214..1621) /db_xref="GOA:Q8V6Z5" /db_xref="InterPro:IPR000942" /db_xref="UniProtKB/TrEMBL:Q8V6Z5" /codon_start=1 /protein_id="CAD20826.1" /gene="AC2" /translation="MQSSSPSQNHSTQVPIKVSHRQFKKRAIRRRRVDLVCGCSYYLH INCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNHQAPTTTIPAEPGHHNSPGSIQ SQPEEGAGDSQMFSQLQDLDDLTASDWSFLKGL" /product="transcriptional activator protein" gene complement(1530..2606) /gene="AC1" CDS complement(1530..2606) /db_xref="GOA:Q8V6Z4" /db_xref="HSSP:1L5I" /db_xref="InterPro:IPR001191" /db_xref="InterPro:IPR001301" /db_xref="InterPro:IPR022690" /db_xref="InterPro:IPR022692" /db_xref="UniProtKB/TrEMBL:Q8V6Z4" /codon_start=1 /protein_id="CAD20827.1" /gene="AC1" /translation="MRTPRFRVQAKNVFLTYPKCSIPKEHQLSFIQTLSLPSNPKFIK ICRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPTCSTNFHPNIQGAKSSSDVKSY LDKDGDTVEWGQFQIDGRSARGGQQSANDAYAKGLNSGSKSEALNVIRELVPKDFVLQ FHNLNSNLDRIFQEPPAPYVSPFPCSSFDQVPVEIEEWVADNVRDSAARPWRPNSIVI EGASRTGKTIWARSLGPHNYLCGHLDLSPKVFNNAAWYNVIDDVDPHYLKHFKEFMGS QRDWQSNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQEALKAWALKNAIFIT LTEPLYSGSNQSQSQTIQEASHPA" /product="replication-associated protein" gene complement(2150..2701) /gene="AC4" CDS complement(2150..2701) /db_xref="InterPro:IPR002488" /db_xref="UniProtKB/TrEMBL:Q8V6Z3" /codon_start=1 /protein_id="CAD20828.1" /gene="AC4" /translation="MPFRDTYIMSPINRRRCSRVSLVECLQLTWSTCELRVLEFKPRM SFSHTQSVLYPKNTSCHSFKHYLSHQTLSSLKSVESCIRMGNLTCMPSSNSRGKSRLR TIVSSIVYTQPVAPISTPTFKVPNQAQMSSPIWIRTETPSNGDNFRSMDDLLEAVNNQ RMMLTPKALTAAVSQKLLMSLGN" /product="AC4 protein" ORIGIN 1 accggttggc cccgcccccc tttaaacgtg gtccccgcgc actacttatg tcggccaatc 61 atgctgtagc tttaaaggtt atgtattagt ggtggaccac tatatactta caggcgaagt 121 tgttgctagt gcgcaatgtg ggatccactg gtgaatgagt ttccagactc ggtgcatggg 181 cttaggtgta tgcttgcaat taaatatttg caggccttag aggatacata cgagcccagt 241 actttgggcc acgatttggt tagagatcta gtctcagtta tcagggctcg taattatgtc 301 gaagcgacca ggagatatca tcatttccac tccaggctcg aaggttcgtc gaaggctgaa 361 cttcgacagc ccatacagga accgtgctac tgcccccact gtccacgtca caaatcgaaa 421 acgggcctgg ataaacaggc ccatgtacag aaagcccaca atgtacagga tgtatagaag 481 cccagacata cctaggggct gtgaaggccc atgtaaggtc cagtcgtatg agcagaggga 541 tgatgtgaag caccttggta tctgtaaggt gattagtgat gtgacacgtg ggcctgggct 601 gacacacagg gtcggaaaga ggttttgtat caagtccatt tacatacttg gtaagatctg 661 gatggatgaa aatattaaga agcaaaatca cacgaataat gtgatgtttt atctgcttag 721 ggatagaagg ccttatggca atgcgcccca agactttggg cagatattta atatgtttga 781 taatgagccc agtactgcaa caattaagaa cgatttgagg gataggtttc aggtattgag 841 gaaatttcat gccactgtta ttggtggtcc atctggcatg aaggagcagg ctttggttaa 901 aaggttttac aggttgaatc atcacgtgac atataatcat caggaggcag ggaagtatga 961 gaatcacaca gagaatgctt tgcttctgta catggcatgt actcatgcct ccaatcctgt 1021 atatgctacg ttgaaaatac gtatatactt ctatgacagt attggcaatt aataaacatt 1081 gaattttatt tcatgagtca actgacactc aatagttttg gcaattacat tgaacaaaac 1141 atgatcagca gctctaatga catcgttaat tgagataaca cctatattat ccaagtattt 1201 aagtacttgg tatctaaaga cccttaagaa aagaccagtc tgaggccgta aggtcgtcca 1261 gatcctgaag ttgagaaaac atttgtgaat ccccagctcc ttcctcaggt tgtgattgaa 1321 tcgaacctgg actgttatga tgtcctggtt cagcaggaat ggtcgttgtt ggtgcctggt 1381 gattgtgaaa tacaggggat tgtttatttc ccaggtatac acgccattca ttgcttgagg 1441 agcagtgatg agttcccctg tgcgtaaatc catgattgga gcagttgata tggaggtaat 1501 atgaacagcc acagacaaga tccactctcc tacgccggat ggctcgcttc ttgaattgtc 1561 tgtgactgac tttgattgga acctgagtag agtggttctg tgagggtgat gaagattgca 1621 ttctttaatg cccaggcctt tagcgcttct tgcttttcct cgtctaggaa ctctttatag 1681 gacgaggtag gtcctggatt gcagaggaag atagtgggaa tgccaccttt aatttgaacg 1741 ggtttcccgt atttcgtgtt ggactgccag tccctctggg accccatgaa ttctttaaag 1801 tgctttaggt agtggggatc gacgtcatca atgacgttgt accaggcagc attattgaag 1861 acctttggac taaggtccag gtgtccacac aggtaattgt gtgggcctaa agatctggcc 1921 catatcgtct tccctgttct gctagcacct tctattacaa tactattggg tctccatggc 1981 cgcgcagcgg aatccctaac attatcagcg acccattctt caatttcaac aggaacttgg 2041 tcaaaggaag aacatgggaa gggagaaaca taaggagctg gtggctcctg gaaaatccta 2101 tctaaattac tattgagatt atgaaattga agtacaaagt cctttgggac taattcccta 2161 atgacattaa gagcttctga cttactgccg ctgttaaggc ctttggcgta agcatcattc 2221 gctgattgtt gaccgcctct agcagatcgt ccatcgatct gaaattgtcc ccattcgacg 2281 gtgtctccgt ccttatccag ataggacttg acatctgagc ttgatttggc accttgaatg 2341 ttggggtgga aattggtgct acaggttggg tgtacacaat cgaagagacg attgttcgta 2401 atcgtgattt tcccctcgaa ttggatgagg gcatgcaagt gaggttcccc attctgatgc 2461 agctctctac agattttaat gaacttaggg tttgatggga gagatagtgt ttgaatgaat 2521 gacagctggt gttctttggg tatagaacac tttgggtatg tgagaaagac attcttggct 2581 tgaactctaa aacgcggagt tcgcatgttg accaagtcaa ttggagacac tcaactagag 2641 acactcttga gcatctcctc ctgttaattg gagacattat ataggtgtct ctaaatggca 2701 ttcttgtaat aagttgaact ttaatttgaa ttaaaaggct caaaaggcgc agaacaccca 2761 aggggccaac cgtataatat t //