LOCUS       KP939408                1169 bp    RNA     linear   VRL 30-JUN-2016
DEFINITION  African horse sickness virus 1 isolate AHSV-1_107_09 segment 9,
            complete sequence.
ACCESSION   KP939408
VERSION     KP939408.1
KEYWORDS    .
SOURCE      African horse sickness virus 1
  ORGANISM  African horse sickness virus 1
            Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus.
REFERENCE   1  (bases 1 to 1169)
  AUTHORS   van Schalkwyk,A., Ngoveni,H.G., Mokotoan,N. and Koekemoer,O.J.J.
  TITLE     The dynamics of African horse sickness virus evolution
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1169)
  AUTHORS   van Schalkwyk,A., Ngoveni,H.G., Mokotoan,N. and Koekemoer,O.J.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAR-2015) Molecular Epidemiology and Diagnostics,
            Agricultural Research Council - Onderstepoort Veterinary
            Institute, Old Soutpan Road, Onderstepoort, Pretoria, Gauteng
            0110, South Africa
COMMENT     ##Assembly-Data-START## Assembly Method :: CLC Genomics v. 7.0
            Sequencing Technology :: Illumina ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /mol_type="genomic RNA"
                     /country="South Africa"
                     /segment="9"
                     /collection_date="23-Oct-2009"
                     /db_xref="taxon:33714"
                     /isolate="AHSV-1_107_09"
                     /organism="African horse sickness virus 1"
     gene            18..1127
                     /gene="VP6"
     CDS             18..1127
                     /codon_start=1
                     /protein_id="ALL99444.1"
                     /gene="VP6"
                     /translation="MSSALLLAPGDLIEKAKRELEQRSITPLLREKDSKEAKSKLKED
                     GEKKNKSEKEENKIHENRRVESQKSEGSGSADCQRGAGSAGADCATSAGGGDGGAGAR
                     TGIGGGGVGGVDSRPGGHGGQGAASDGKGVGKSKTGADRVANDGATRDAGSSEVPSGG
                     ITSGGLQGRGGLVAKSSECGGEPLDRTGGCSGNSKTEGEEAKVGGSDRRIGGLATQEI
                     ADFVKKKIGVEVQVFSKGMSNLFTVDKSLLERGGLGREDILHQSDIVKEIRASDKRVK
                     IIPLSTVKRMIAEFGGTEEDEIKAVQTQSSSIRYISNRMEDVSRAKAMFTAPTGDEGW
                     KEVAKAATQRPNIMAYVHEGEGDGLKELLHLIDHI"
                     /product="RNA helicase"
     gene            193..657
                     /gene="NS4"
     misc_feature    193..657
                     /gene="NS4"
                     /note="similar to non-structural protein 4"
ORIGIN      
        1 gttaaataag ttgtctcatg tcttcggcat tactccttgc acctggcgat ctaatcgaaa
       61 aagcaaagcg cgagctcgag caacgctcga taactccgct attgcgggag aaagattcga
      121 aagaagccaa atctaaatta aaagaagacg gggagaagaa gaacaagagt gaaaaagaag
      181 agaacaaaat acatgagaat cgaagagtgg agagccagaa atctgaggga agcggatcag
      241 ccgattgtca acgcggcgca ggaagcgcag gagcagattg cgcaacatca gcaggaggag
      301 gagatggagg tgcaggagca aggaccggga ttggaggggg aggagtggga ggagtggatt
      361 cgagacctgg aggacatgga ggacagggtg cagcctcgga tggaaaggga gtgggtaaat
      421 ctaagaccgg agcagatcgt gtcgctaatg atggtgcaac acgcgatgct ggttccagtg
      481 aggtaccatc tggtggaatc acttcaggag gtcttcaagg ccgaggagga ctcgttgcta
      541 agagtagtga atgtggcggg gaaccattgg ataggacagg cggctgcagc ggaaattcaa
      601 aaactgaggg agaggaggca aaggttggag ggagcgatag acggattgga ggattagcaa
      661 cgcaggagat tgccgacttt gtgaagaaga agatcggagt tgaagttcag gtgttttcca
      721 aaggaatgag caacttattt actgtagata aatcattgct tgagcggggt gggttaggga
      781 gggaagacat tctacatcaa tcagatattg taaaagagat tagagcaagt gataaaagag
      841 tcaaaattat tcctctttct acagtgaaga gaatgatagc ggaattcgga gggacagagg
      901 aggatgaaat caaagctgtt caaactcaaa gctcttctat caggtatatt agtaatagaa
      961 tggaagatgt ttcaagagcg aaggcgatgt tcacagcgcc gacaggtgac gaggggtgga
     1021 aagaggttgc taaagcagca actcagcgtc ctaacatcat ggcgtatgta cacgaagggg
     1081 aaggtgatgg attgaaagag cttttacatc tgattgatca tatctaggtc caggggtaaa
     1141 cggcagcttg agggcaactt aaaacttac
//