LOCUS       KP939529                1566 bp    RNA     linear   VRL 30-JUN-2016
DEFINITION  African horse sickness virus 3 isolate AHSV-3_DG25324_14 segment
            6, complete sequence.
ACCESSION   KP939529
VERSION     KP939529.1
KEYWORDS    .
SOURCE      African horse sickness virus 3
  ORGANISM  African horse sickness virus 3
            Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus.
REFERENCE   1  (bases 1 to 1566)
  AUTHORS   van Schalkwyk,A., Ngoveni,H.G., Mokotoan,N. and Koekemoer,O.J.J.
  TITLE     The dynamics of African horse sickness virus evolution
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1566)
  AUTHORS   van Schalkwyk,A., Ngoveni,H.G., Mokotoan,N. and Koekemoer,O.J.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAR-2015) Molecular Epidemiology and Diagnostics,
            Agricultural Research Council - Onderstepoort Veterinary
            Institute, Old Soutpan Road, Onderstepoort, Pretoria, Gauteng
            0110, South Africa
COMMENT     ##Assembly-Data-START## Assembly Method :: CLC Genomics v. 7.0
            Sequencing Technology :: Illumina ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1566
                     /mol_type="genomic RNA"
                     /country="South Africa"
                     /segment="6"
                     /collection_date="11-Feb-2014"
                     /db_xref="taxon:117204"
                     /isolate="AHSV-3_DG25324_14"
                     /organism="African horse sickness virus 3"
     gene            20..1537
                     /gene="VP5"
     CDS             20..1537
                     /codon_start=1
                     /protein_id="ALL99721.1"
                     /gene="VP5"
                     /translation="MGKFTSFLKRAGSATKKALTSDAAKRMYKMAGKTLQKVVESEVG
                     SAAIDGVMQGTIQSIIQGENLGDSIKQAVILNVAGTLESAPDPLSPGEQLLYNKVSKI
                     ERAEKEDRVIETHNEKIIEKYGEDLLKIRKIMKGEAKAEQLEGKEMEYVEKALKGMLK
                     IGKDQSERITQLYRALQTEEDLRTSDETRMINEYREKFDALKQAIELEQQATHEEAVQ
                     EMLDLSAEVIETAAEEVPIFGAGAANVVATTRAIQGGLKLKEIIDKLTGIDLSHLKVA
                     DIHPHIIEKAMLKDKIPDNELAMAIKSKVEVIDEMNTETEHVIESIMPLVKKEYEKHD
                     NKYHVNIPSALKIHSEHTPKVHIYTTPWDSDKVFICRCIAPHHHQRSFMIGFDLEIEF
                     VFYEDTSVEGHIMHGGAVSIEGRGFRQAYSEFMNAAWSMPSTPELHKRRLQRSLGSHP
                     IYMGSMDYTVSYEQLVSNAMKLVYDTDLQMHCLRGPLKFQRRTLMNALLFGVKVA"
                     /product="outer capsid protein"
ORIGIN      
        1 gtttattttt ccagagacca tgggtaagtt cacatccttt ttgaagcgcg cgggtagcgc
       61 gaccaagaaa gcactaactt cagatgcagc aaaaaggatg tataaaatgg cagggaaaac
      121 attacaaaag gtcgtagaaa gcgaagtggg aagcgcggcg atagatggag taatgcaagg
      181 aacaattcag agcataatac agggagaaaa cctgggagat tcaatcaaac aagcagtaat
      241 tttaaatgta gcaggcacgt tagagtcagc gccagatcca ttaagtccag gcgaacaact
      301 actatataat aaagtatcta aaatcgaaag agcggagaag gaagatcgcg tgattgaaac
      361 gcataatgaa aagataattg aaaaatatgg ggaagaccta ttgaagatcc ggaaaataat
      421 gaagggagag gctaaagcgg aacagctcga gggaaaagaa atggaatacg tcgaaaaagc
      481 actaaaaggc atgctaaaaa tcggaaaaga tcaatcagaa cgtatcacac aactatatcg
      541 cgccctacaa acagaagagg atctaagaac ttcagacgag acgaggatga taaacgagta
      601 tagagaaaaa tttgatgcac taaaacaagc aattgaactc gaacagcaag caacgcatga
      661 agaagcggtg caggagatgt tggacctaag cgcagaggtc atcgagacag cagcggaaga
      721 ggtaccaatc tttggcgcag gcgccgcaaa cgttgtcgcg acaacacgcg caattcaagg
      781 aggcctgaag ctgaaggaga taatagataa actcacagga attgatctct cccatttaaa
      841 agtagcggat atccacccgc atataattga aaaagctatg ctaaaagata aaatcccaga
      901 taatgagtta gcgatggcga taaaatcaaa ggttgaagtg atcgatgaaa tgaatacgga
      961 aacagaacac gtgatcgaat ccatcatgcc actagtgaag aaagaatacg aaaaacatga
     1021 taacaaatac cacgtgaata taccaagtgc gctgaaaata cactcagaac atacgccaaa
     1081 ggtacatata tacactacgc cgtgggactc tgataaagtt tttatatgca gatgcattgc
     1141 gccgcatcat catcagagga gttttatgat tggatttgat ttagagattg aattcgtctt
     1201 ttatgaggat acctcggttg aaggtcacat aatgcatggg ggagcggtgt cgatcgaggg
     1261 acgaggattt agacaagctt atagtgagtt catgaacgcg gcttggtcta tgccctcaac
     1321 tccagagctg cataagagaa gattgcaacg tagtctaggt tcacatccga tttatatggg
     1381 atcgatggat tatactgtaa gttatgaaca gctcgtttcg aacgcgatga agttagttta
     1441 tgacacagac ctacaaatgc actgtttacg tggaccactg aaattccaaa ggcgcaccct
     1501 gatgaatgcg cttctctttg gtgtgaaagt agcttgaaag cctcatggcg cgggaaaaac
     1561 acatac
//