LOCUS       KP939531                1566 bp    RNA     linear   VRL 30-JUN-2016
DEFINITION  African horse sickness virus 3 isolate AHSV-3_DG25423_14 segment
            6, complete sequence.
ACCESSION   KP939531
VERSION     KP939531.1
KEYWORDS    .
SOURCE      African horse sickness virus 3
  ORGANISM  African horse sickness virus 3
            Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus.
REFERENCE   1  (bases 1 to 1566)
  AUTHORS   van Schalkwyk,A., Ngoveni,H.G., Mokotoan,N. and Koekemoer,O.J.J.
  TITLE     The dynamics of African horse sickness virus evolution
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1566)
  AUTHORS   van Schalkwyk,A., Ngoveni,H.G., Mokotoan,N. and Koekemoer,O.J.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAR-2015) Molecular Epidemiology and Diagnostics,
            Agricultural Research Council - Onderstepoort Veterinary
            Institute, Old Soutpan Road, Onderstepoort, Pretoria, Gauteng
            0110, South Africa
COMMENT     ##Assembly-Data-START## Assembly Method :: CLC Genomics v. 7.0
            Sequencing Technology :: Illumina ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1566
                     /mol_type="genomic RNA"
                     /country="South Africa"
                     /segment="6"
                     /collection_date="07-Mar-2014"
                     /db_xref="taxon:117204"
                     /isolate="AHSV-3_DG25423_14"
                     /organism="African horse sickness virus 3"
     gene            20..1537
                     /gene="VP5"
     CDS             20..1537
                     /codon_start=1
                     /protein_id="ALL99723.1"
                     /gene="VP5"
                     /translation="MGKFTSFLKRAGSATKKALTSDAAKRMYKMAGKTLQKVVDSEVG
                     SAAIDGVMQGTIQSIIQGENLGDSIKQAVILNVAGTLESAPDPLSPGEQLLYNKVSKI
                     ERAEKEDRVIETHNEKIIEKYGEDLLKIRKIMKGEAEAEQLEGKEMEYVEKALKGMLK
                     IGKDQSERITRLYRALQTEEDLRTSDETRMISEYREKFDALKQAIELEQQATHEEAVQ
                     EMLDLSAEVIETAAEEVPIFGAGAANVVATTRAIQGGLKLKEIIDKLTGIDLSHLKVA
                     DIHPHIIEKAMLKDKIPDNELAMAIKSKVEVIDEMNTETEHVIESIMPLVKKEYEKHD
                     NKYHVNIPSALKIHSEHTPKVHIYTTPWDSDKVFICRCIAPHHHQRSFMIGFDLEIEF
                     VFYEDTSVEGHIMHGGAVSIEGRGFRQAYSEFMNAAWSMPSTPELHKRRLQRSLGSHP
                     IYMGSMDYTVSYEQLVSNAMKLVYDTDLQMHCLRGPLKFQRRTLMNALLFGVKVA"
                     /product="outer capsid protein"
ORIGIN      
        1 gttaattttt ccagagacca tgggtaagtt cacatccttt ttgaagcgcg cgggtagcgc
       61 gaccaagaaa gcactaactt cagatgcagc taagaggatg tataaaatgg ctggtaaaac
      121 gttacagaag gtcgtagata gtgaagtggg aagtgcggcg atagatggag taatgcaagg
      181 aacaattcag agcataatac agggtgaaaa tttgggagat tcaatcaaac aagcagtaat
      241 tttgaatgta gctggcacgt tagagtcggc tccagatcca ttaagtccag gtgaacaact
      301 attatataat aaagtatcta aaatcgaaag agcggagaag gaagatcgcg tgattgagac
      361 gcataatgaa aagattattg aaaagtatgg ggaagatcta ttgaagatcc ggaaaattat
      421 gaagggagag gctgaagcgg agcagctcga gggaaaagaa atggaatacg tcgaaaaagc
      481 gctaaagggc atgctcaaaa tcggaaaaga tcaatctgag cgtatcacac ggttgtatcg
      541 cgccctccaa acggaagagg atttaagaac ttcggatgag acgaggatga tcagcgagta
      601 tagagaaaaa tttgatgcgt tgaaacaggc aattgaactt gagcagcagg caacgcatga
      661 ggaagctgtg caggagatgt tggatttaag tgccgaggtc atcgagacgg cggctgaaga
      721 ggtaccaatc tttggcgctg gcgctgcaaa tgttgttgcg acgacacgcg caattcaagg
      781 gggcctgaag ttgaaggaga taatagataa actcacaggg attgatctct ctcatttaaa
      841 agtagcggat atccatcctc atataattga gaaagctatg ctaaaggata aaatcccaga
      901 taatgagttg gcgatggcga taaaatcgaa ggttgaggtt attgatgaaa tgaatacgga
      961 gacagaacac gttattgagt ccatcatgcc tctagtgaag aaggaatacg aaaaacatga
     1021 taacaaatac catgtgaata taccaagtgc gttgaaaata cattcagaac atacgccaaa
     1081 ggtacatata tacactacgc cgtgggactc tgataaagtt tttatatgca gatgcattgc
     1141 gccgcatcat catcagagga gttttatgat tggatttgat ttagagattg aattcgtctt
     1201 ttatgaggat acctcggttg aaggtcacat aatgcatggg ggagcggtgt cgatcgaggg
     1261 acgaggattt agacaagctt atagtgagtt catgaacgcg gcttggtcta tgccctcaac
     1321 tccagagctg cataagagaa gattgcaacg tagtctaggt tcacatccga tttatatggg
     1381 atcgatggat tatactgtaa gttatgaaca gctcgtttcg aacgcgatga agttagttta
     1441 tgacacagac ctacaaatgc actgtttacg tggaccactg aaattccaaa ggcgcaccct
     1501 gatgaatgcg cttctctttg gtgtgaaagt agcttgaaag cctcatggcg cgggaaaaac
     1561 acatac
//