LOCUS       KP939659                1166 bp    RNA     linear   VRL 30-JUN-2016
DEFINITION  African horse sickness virus 4 isolate AHSV-4_1927_14 segment 8,
            complete sequence.
ACCESSION   KP939659
VERSION     KP939659.1
KEYWORDS    .
SOURCE      African horse sickness virus 4
  ORGANISM  African horse sickness virus 4
            Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus.
REFERENCE   1  (bases 1 to 1166)
  AUTHORS   van Schalkwyk,A., Ngoveni,H.G., Mokotoan,N. and Koekemoer,O.J.J.
  TITLE     The dynamics of African horse sickness virus evolution
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1166)
  AUTHORS   van Schalkwyk,A., Ngoveni,H.G., Mokotoan,N. and Koekemoer,O.J.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAR-2015) Molecular Epidemiology and Diagnostics,
            Agricultural Research Council - Onderstepoort Veterinary
            Institute, Old Soutpan Road, Onderstepoort, Pretoria, Gauteng
            0110, South Africa
COMMENT     ##Assembly-Data-START## Assembly Method :: CLC Genomics v. 7.0
            Sequencing Technology :: Illumina ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1166
                     /mol_type="genomic RNA"
                     /country="Namibia"
                     /segment="8"
                     /collection_date="04-Apr-2014"
                     /db_xref="taxon:36421"
                     /isolate="AHSV-4_1927_14"
                     /organism="African horse sickness virus 4"
     gene            23..1120
                     /gene="NS2"
     CDS             23..1120
                     /codon_start=1
                     /protein_id="ALL99550.1"
                     /gene="NS2"
                     /translation="MAEVRKQQQFTRSVCVLDLGQKTYCGKVVRAVNGVYYTIKIGRT
                     VQCGVTPTPIPKSYVLEIRECGAYRIQDGTDVLSLMITESGIEVTQNRWEEWSFEALT
                     PVPMAVAVNVGRGSFDTEIKYVRGSGAVPPYTKNGMDRRAMPSLPGITTLDVGVRDLR
                     LKMKENREAEREKMERALSGGLDMGSCRMYGGGRNDVREITLDEAGPSRTPRKLSVQS
                     NESRSDDVARRHAELVEMERLRMMKNEPIRTESMWCQSDSDDQSDEDHEIGSTEPENY
                     ITEEYTRRLNEVKTKYSKELSSLAMRVPKNEGNCGKPIFSKKCKWENVPIYNYDEASG
                     NYRFVSVGSATHYHCCANDLSYMILPVGGSS"
                     /product="non-structural protein 2"
ORIGIN      
        1 gtttaaaaat ccgttcgtca tcatggcaga ggtcagaaag caacaacaat tcacgcgatc
       61 agtttgtgtt cttgatttag gacaaaagac ttattgcggt aaagtggtta gagcagtaaa
      121 tggagtatat tacaccatta aaattgggag aactgtacaa tgtggggtta cgccgacccc
      181 gattccaaaa agttatgttt tggagattcg tgaatgcgga gcttaccgta ttcaggatgg
      241 gacggatgtt ttaagcttaa tgattactga aagtggaatt gaagtaacgc aaaaccgatg
      301 ggaagagtgg agttttgaag cgttaacacc agtaccgatg gcagtggcgg tgaatgtagg
      361 gagaggctcg tttgacactg aaattaaata tgtaagagga agcggtgcag ttccacctta
      421 tacgaagaat ggaatggatc gaagagcaat gccttctttg ccaggaataa caactttaga
      481 tgttggagtt agagatttgc gtttaaagat gaaggagaac agggaggcag aaagggagaa
      541 gatggaacga gccctaagtg gtgggctcga tatgggaagc tgtagaatgt atgggggagg
      601 aagaaatgat gtgcgtgaga ttaccttgga tgaggccgga ccatcacgta caccaaggaa
      661 actttctgtt cagagtaatg aaagtcgctc agatgatgtg gcgcgaagac atgctgagtt
      721 ggtggagatg gagcgactaa gaatgatgaa gaatgaaccg atacgtacgg agagtatgtg
      781 gtgtcaaagt gatagtgatg atcaatctga tgaggatcac gagattggga gtacagagcc
      841 agaaaattat attactgaag agtatacacg taggctgaac gaggtaaaga cgaaatattc
      901 aaaggagtta tcttcattgg cgatgagagt tccaaaaaat gagggcaatt gcggaaaacc
      961 cattttttct aaaaagtgta aatgggagaa cgttccgatc tacaattacg acgaagctag
     1021 cggaaactat cgttttgtgt cggtaggaag tgctacacat taccactgct gtgctaatga
     1081 cttgagttac atgattctcc cagtaggggg gagcagttga tcctcctggg tgtagctggc
     1141 gcatgtaacc gcggatttca acatac
//