LOCUS       KP939794                 756 bp    RNA     linear   VRL 30-JUN-2016
DEFINITION  African horse sickness virus 5 isolate AHSV-5_47_86 segment 10,
            complete sequence.
ACCESSION   KP939794
VERSION     KP939794.1
KEYWORDS    .
SOURCE      African horse sickness virus 5
  ORGANISM  African horse sickness virus 5
            Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus.
REFERENCE   1  (bases 1 to 756)
  AUTHORS   van Schalkwyk,A., Ngoveni,H.G., Mokotoan,N. and Koekemoer,O.J.J.
  TITLE     The dynamics of African horse sickness virus evolution
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 756)
  AUTHORS   van Schalkwyk,A., Ngoveni,H.G., Mokotoan,N. and Koekemoer,O.J.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAR-2015) Molecular Epidemiology and Diagnostics,
            Agricultural Research Council - Onderstepoort Veterinary
            Institute, Old Soutpan Road, Onderstepoort, Pretoria, Gauteng
            0110, South Africa
COMMENT     ##Assembly-Data-START## Assembly Method :: CLC Genomics v. 7.0
            Sequencing Technology :: Illumina ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..756
                     /mol_type="genomic RNA"
                     /country="South Africa"
                     /segment="10"
                     /collection_date="1986"
                     /db_xref="taxon:86059"
                     /isolate="AHSV-5_47_86"
                     /organism="African horse sickness virus 5"
     gene            19..672
                     /gene="NS3"
     CDS             19..672
                     /codon_start=1
                     /protein_id="ALL99348.1"
                     /gene="NS3"
                     /translation="MNLAAIAKNYSMHNGESGAIVPYVPPPYNFASAPTFSQRTSQME
                     SVSLGILNQAMSSTTGASGALKDEKAAFGAMAEALRDPEPIRQIKKQVGIRTLKNLKM
                     ELATMRRKKSALKIMIFISGCVTLATSMVGGLSIVDNEIFEDYKKNDWLMKTIHGLNL
                     LCTTVLLAAGKISDKIQEEISRTKRDIAKRESYVSAASMSWNGDTEVLLQGIKYGDS"
                     /product="non-structural protein 3"
     gene            52..672
                     /gene="NS3A"
     CDS             52..672
                     /codon_start=1
                     /protein_id="ALL99349.1"
                     /gene="NS3A"
                     /translation="MHNGESGAIVPYVPPPYNFASAPTFSQRTSQMESVSLGILNQAM
                     SSTTGASGALKDEKAAFGAMAEALRDPEPIRQIKKQVGIRTLKNLKMELATMRRKKSA
                     LKIMIFISGCVTLATSMVGGLSIVDNEIFEDYKKNDWLMKTIHGLNLLCTTVLLAAGK
                     ISDKIQEEISRTKRDIAKRESYVSAASMSWNGDTEVLLQGIKYGDS"
                     /product="non-structural protein 3A"
ORIGIN      
        1 gtttaattat cccttgtcat gaatctagct gcaatcgcca agaattatag tatgcataat
       61 ggagaatcgg gggcgattgt cccttatgtg ccaccaccat ataatttcgc gagcgctccg
      121 acgttttctc agcgtacgag tcaaatggag tccgtgtcgc ttgggatact taaccaagcc
      181 atgtcaagta caactggtgc gagtggggcg cttaaagatg aaaaagcagc atttggtgct
      241 atggcggaag cattgcgtga tccagaaccc atacgtcaaa ttaaaaagca ggtgggtatc
      301 agaactttaa agaacttaaa gatggagtta gcgacaatgc gtcgaaaaaa gtcggcatta
      361 aaaataatga tttttatcag cggatgtgtg acgttagcaa catcgatggt cggagggtta
      421 agtattgttg ataacgaaat atttgaagat tataagaaga acgattggtt aatgaaaaca
      481 atacatgggc tgaatttgtt atgtaccaca gttttgttgg cggcgggtaa gatctctgat
      541 aaaatacaag aggagatttc acgaacaaag cgtgatattg cgaaaagaga gtcttatgtg
      601 tctgcggcga gtatgtcatg gaatggagat actgaagtat tattgcaagg aattaagtat
      661 ggcgatagct agtacgacct ccacaagcgg aaaatccatc gtgttggatg gatggaacgc
      721 ctagatcgtt ttctagggag tgggataaca acttac
//