LOCUS       KP940215                1169 bp    RNA     linear   VRL 30-JUN-2016
DEFINITION  African horse sickness virus 9 isolate AHSV-9_2033_14 segment 9,
            complete sequence.
ACCESSION   KP940215
VERSION     KP940215.1
KEYWORDS    .
SOURCE      African horse sickness virus 9
  ORGANISM  African horse sickness virus 9
            Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus.
REFERENCE   1  (bases 1 to 1169)
  AUTHORS   van Schalkwyk,A., Ngoveni,H.G., Mokotoan,N. and Koekemoer,O.J.J.
  TITLE     The dynamics of African horse sickness virus evolution
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1169)
  AUTHORS   van Schalkwyk,A., Ngoveni,H.G., Mokotoan,N. and Koekemoer,O.J.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAR-2015) Molecular Epidemiology and Diagnostics,
            Agricultural Research Council - Onderstepoort Veterinary
            Institute, Old Soutpan Road, Onderstepoort, Pretoria, Gauteng
            0110, South Africa
COMMENT     ##Assembly-Data-START## Assembly Method :: CLC Genomics v. 7.0
            Sequencing Technology :: Illumina ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /mol_type="genomic RNA"
                     /country="Mozambique"
                     /segment="9"
                     /collection_date="04-Jun-2014"
                     /db_xref="taxon:10897"
                     /isolate="AHSV-9_2033_14"
                     /organism="African horse sickness virus 9"
     gene            18..1127
                     /gene="VP6"
     CDS             18..1127
                     /codon_start=1
                     /protein_id="ALL99520.1"
                     /gene="VP6"
                     /translation="MSSALLLAPGDLIEKAKRELEQRSITPLLREKDSKEAKSKLKED
                     GEKKNKSEKEENKIHDDRRVESQKSEGGGPADCQRGAGSAGADCATSTGGGDGSAGAR
                     TGIGGGGVGGVDSRSGGHGGQGAASVGKGVGKSKTGANRVANDDATRNVGSSEVSSGG
                     ITSGGLQGRGGLVAKSGECGGEPLDRTGGCSGNSKTEGEEAKAGGGDRRIGGLATQEI
                     ADFVKKKIGVEVQVFSKGMSNLFTVDKSLLERGGLGREDILHQSDIVKEIRVSDKRVK
                     IIPLSTVKRMIAEFGGTEEDEIKAVQTQSSSIRYISNRIEDVSRAKAMFTAPTGDEGW
                     KEVAKAATQRPNIMAYVHEGEGDGLKELLHLIDHI"
                     /product="RNA helicase"
     gene            193..657
                     /gene="NS4"
     misc_feature    193..657
                     /gene="NS4"
                     /note="similar to non-structural protein 4"
ORIGIN      
        1 gttaaataag ttgtctcatg tcttcggcat tactccttgc acctggcgat ctaatcgaaa
       61 aagcaaagcg cgagctcgag caacgctcga taactccgct cttgcgggag aaagattcta
      121 aagaagccaa atctaaatta aaagaagacg gggagaagaa gaacaagagt gaaaaggaag
      181 agaacaaaat acatgatgat cgaagagtgg agagccagaa atctgaggga ggcggaccag
      241 ccgattgtca acgcggcgca ggaagcgcag gagcagattg tgcaacatca acaggaggag
      301 gagatggaag tgcaggagca aggaccggga ttggaggggg aggagtggga ggagtggatt
      361 cgagatctgg aggacatgga ggacagggtg cagcctcggt tggaaaggga gtgggtaaat
      421 ctaagaccgg agcaaatcgt gtcgctaatg atgatgcaac acgcaatgtt ggttccagtg
      481 aggtatcatc tggtggaatc acttcaggag gtcttcaagg ccgaggagga ctcgttgcaa
      541 agagtggtga atgtggcggg gaaccattgg ataggacagg cggctgcagc ggaaattcaa
      601 aaactgaggg agaggaggca aaggctggag ggggcgatag acggattgga ggattagcga
      661 cgcaggagat tgcagacttt gtgaagaaga agatcggagt tgaagttcag gtgttttcaa
      721 aaggaatgag caacttattt actgtagata agtcactgct tgagcggggt gggttaggga
      781 gggaggacat tttacatcaa tcagatattg taaaagagat tagagtaagt gataaaagag
      841 tcaagattat tcctctttcc acagtaaaga gaatgatagc agaattcgga ggaacagagg
      901 aggatgaaat caaagctgtt caaactcaaa gttcttctat caggtatatt agtaatagaa
      961 tcgaagatgt ttcaagagcg aaggcgatgt tcacagcgcc gacaggtgat gaggggtgga
     1021 aagaggtcgc taaagcagca actcagcgcc ctaacatcat ggcgtatgtg cacgaaggag
     1081 aaggtgatgg attgaaagag cttttacatc tgattgatca tatctaggtc caggggtaaa
     1141 cggcagcttg agggcaactt aaaacttac
//