LOCUS       KP940158                1978 bp    RNA     linear   VRL 30-JUN-2016
DEFINITION  African horse sickness virus 9 isolate AHSV-9_22S_03 segment 4,
            complete sequence.
ACCESSION   KP940158
VERSION     KP940158.1
KEYWORDS    .
SOURCE      African horse sickness virus 9
  ORGANISM  African horse sickness virus 9
            Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus.
REFERENCE   1  (bases 1 to 1978)
  AUTHORS   van Schalkwyk,A., Ngoveni,H.G., Mokotoan,N. and Koekemoer,O.J.J.
  TITLE     The dynamics of African horse sickness virus evolution
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1978)
  AUTHORS   van Schalkwyk,A., Ngoveni,H.G., Mokotoan,N. and Koekemoer,O.J.J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-MAR-2015) Molecular Epidemiology and Diagnostics,
            Agricultural Research Council - Onderstepoort Veterinary
            Institute, Old Soutpan Road, Onderstepoort, Pretoria, Gauteng
            0110, South Africa
COMMENT     ##Assembly-Data-START## Assembly Method :: CLC Genomics v. 7.0
            Sequencing Technology :: Illumina ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1978
                     /mol_type="genomic RNA"
                     /country="South Africa"
                     /segment="4"
                     /collection_date="14-Apr-2003"
                     /db_xref="taxon:10897"
                     /isolate="AHSV-9_22S_03"
                     /organism="African horse sickness virus 9"
     gene            12..1940
                     /gene="VP4"
     CDS             12..1940
                     /codon_start=1
                     /protein_id="ALL99957.1"
                     /gene="VP4"
                     /translation="MEPYAILYVTQEIEYLLKDSFLPKWELDGIKDLNTLWLERGRMA
                     CDTYAVGKIEQWSVRQLRAHRFLFISTKRKIRLKDCTISPDIFILKKELKEYDMKRFE
                     TLIGRRRVTLRKSFGNMLRTYAFQHVTVLHGSEAETLSYADPKRHVVKGQPRAAPMYD
                     HPDRWWRDVDDGPTDKKLVSMLDYIIYSADEVYYVGCGDLKTLEQFASRDKKRFDRIK
                     WICIDPIAPETSYANVKVVKEKVVSARDLKHYLMRDEVERLLIWDVSADGLKGTIEWE
                     KRRFKEDRNGENIAEALCTDFALALIKHRIPEESDEYICRSSWLLPQPGAPITMYELR
                     NLMRLDGYSHVERKHIPRAYVRKIDAEVARRLVEEYHGEDVGRLLKRSLYEDIHIERA
                     DGLTDSDERTRADLFYLTNMRNAAFMHDVYRVVEKSFISTLWVSNRQNFTYDDVPINR
                     NFITLRFSKRNRRVLDGNGAILFLMWQHPKDFPKTTNYDPSWAENYAVIFYHALTSPV
                     PDLSLCRFIGLRLMSSTLRINSDRAHQVTDILKKLGLDVSGHLFICLMSNSYVADLDW
                     WFRMILEWSVKDREGKLAALSEAKAELIEWKDEKADEPWHIKNDLLAALFEFMYFAKH
                     FEINERYVESWIQYLRNA"
                     /product="RNA capping and methylase protein"
ORIGIN      
        1 gtttatttag gatggaacct tacgcaatat tgtatgtgac gcaggagatc gaatacctac
       61 tcaaagatag ttttcttcca aagtgggaac ttgatgggat taaggatctt aatacattat
      121 ggttggagag gggcagaatg gcatgtgaca catacgcggt tggaaaaatt gagcaatggt
      181 cggtgcggca gctgcgtgcg catagatttt tgtttataag tacaaaaagg aagatcaggc
      241 tgaaggattg cacgatttcg cccgacatat tcattttgaa aaaagaatta aaggagtatg
      301 atatgaagag gttcgaaacg ttaattggca gaagaagggt aacgttaagg aagagtttcg
      361 ggaatatgtt aagaacttat gccttccaac acgtgactgt tctacacggg agtgaggcgg
      421 aaacgttgag ttatgcagat ccgaagagac acgtcgtgaa aggccagcct agagctgctc
      481 cgatgtatga tcatccagac agatggtggc gggatgttga tgatggacct actgataaga
      541 aattagttag tatgcttgat tacattatct atagtgcgga tgaagtgtat tatgtcggat
      601 gtggtgattt aaaaacactc gagcaattcg cgtctagaga caagaagcgg tttgacagaa
      661 tcaaatggat atgcatagat ccaattgccc cggaaacatc gtacgctaat gtaaaagttg
      721 taaaagaaaa ggttgtatca gcgcgtgatc tgaaacatta tttgatgcgc gatgaggtcg
      781 agcgattatt aatttgggat gtgagtgcag atgggttaaa ggggacaatt gagtgggaga
      841 agcggagatt taaggaggat cgtaatggtg aaaacatcgc ggaggcgttg tgcacagatt
      901 tcgctttagc tttgattaaa catcgaatac cagaagaaag tgatgaatat atttgcagga
      961 gctcttggct actaccacag cccggggctc caataacgat gtatgaactg cgaaatctca
     1021 tgcgtttgga tggatattca catgttgaaa gaaaacacat accacgagcg tacgtccgga
     1081 aaatcgatgc ggaagttgcg agaagattag ttgaggaata tcatggagag gatgtagggc
     1141 gattgttgaa acgatcttta tacgaagata tacatattga gcgtgctgat ggattaacgg
     1201 atagtgatga gagaacgaga gcggatctct tttacctaac gaatatgcgg aacgctgcgt
     1261 ttatgcatga tgtatatcga gtagtcgaaa aaagttttat ttctaccctg tgggtctcga
     1321 acaggcagaa tttcacatac gatgatgtcc caattaatag gaattttatt acattacgct
     1381 tttcaaagag gaatcgacga gtgcttgacg ggaatggagc aattctgttt ctgatgtggc
     1441 agcatccaaa ggattttcca aaaaccacga attatgatcc cagttgggcg gagaactatg
     1501 ctgtgatttt ctaccatgcg ttaacgagtc cggttccgga tctttcctta tgcagattta
     1561 ttggattaag gttaatgtct tcgactttga ggataaactc agatcgtgca catcaagtga
     1621 ctgatatcct gaagaaattg ggtttagacg tttcgggtca tttatttatt tgtctaatgt
     1681 caaattcata tgttgctgat cttgactggt ggtttcgcat gattttagag tggtcagtta
     1741 aggatagaga agggaagctg gcggcattaa gtgaagcaaa agcagaactc attgagtgga
     1801 aggatgagaa agcggatgag ccttggcaca taaagaatga tttgctggcg gcgttgtttg
     1861 agtttatgta ctttgcgaaa cattttgaga ttaacgagag gtatgtcgag tcctggatac
     1921 aatatttgcg taacgcttaa aggtgacact tagcgagggg gaatcctaat aaccttac
//