LOCUS KF963086 3202 bp RNA linear VRL 31-DEC-2015 DEFINITION African horse sickness virus 9 isolate ETH2010/16 Outer capsid protein (VP2) gene, complete cds. ACCESSION KF963086 VERSION KF963086.1 KEYWORDS . SOURCE African horse sickness virus 9 ORGANISM African horse sickness virus 9 Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus. REFERENCE 1 (bases 1 to 3202) AUTHORS Bachanek-Bankowska,K., Maan,S., Gelaye,E., Ayelet,G., Jenberie,S., Sutton,G., Aklilu,N., Oura,C., Batten,C. and Mertens,P.P.C. TITLE Sequencing and molecular typing of African horse sickness virus isolates from outbreaks in Ethiopia during 2010 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3202) AUTHORS Bachanek-Bankowska,K. TITLE Direct Submission JOURNAL Submitted (13-DEC-2013) The Pirbright Institute, Ash Road, Pirbright, Woking, Surrey GU24 0NF, United Kingdom COMMENT ##Assembly-Data-START## Assembly Method :: Lasergene v. 10 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3202 /mol_type="genomic RNA" /country="Ethiopia" /segment="2" /collection_date="03-Jul-2010" /host="horse" /db_xref="taxon:10897" /isolate="ETH2010/16" /serotype="9" /organism="African horse sickness virus 9" gene 1..3202 /gene="VP2" CDS 13..3171 /codon_start=1 /protein_id="AIX10306.1" /gene="VP2" /translation="MAFEFGILQTDKIRENTLEKTNCDVILTRENRVRTREVDGVKGY YWEDTDHRLGLCEVEHTVSVRDFMYKQTKCEGSYPIVPLYMIDAIKYGRMIDRNDHQI RVDKDDKTLSKIQVQPYLGDAYFSPEHYTATFFKREPLPIHVDTIRDYIGKRINYFER ELGTGVRDANLEMIVRKWKDNTYRRIEGEKTTMCVRHEPDSVLQILKKMRFGMLYPNY YMLNTGYIVTESSKGAPLNRWLVKERTVGKVKAAEAFAGNSLLKTLASRMEDEELSRE IIVAVINYGSKFGTRSGRKKDLMTIDKLEKYCESLTTFVHKKKRDEGDDETARAIIRN QWIKGMPSMNLKKEMKVSRGPIQNWSFFMSLEVFKRNNKVDIDPNHDTWKNHVKEIRE RMQKEQSANSNAPLKIQVDGVSLSTSEFYGTVEHWIDWVVDLIMLAQVKRLIKEYKFI RLETTSLMAGMNKLVGALRCYAYCLILALYDFHGADIEGFEKGSNSSAIVETVVQMFP NFKQEIQANFGINLNIKDKKQVLFVRMDMDSEFSEDEQKGYMFEYGWAKREERIWTNY GDILTDLVEQLYKSILDYEEWEKIVEDPERYFYDELFNASPETVFISKGYDLDNNIVI EGKVGQDVTYFSKRFVSYWYRVRQVQTSKGIERRSIEDVKYREFDIENFKPYAIGEIG IHASTYKYQDLLAGRNRGEKVKDSQALVWYDLALTNYTLVRPQDRCWIMSCTDSEYTL RFATITMIFERLSEETDLSYHDILLRVREYPIQSFASYKHFYVRVLQHVFRDYQEIDV LEFCTRMLDPRTRESGLNKFSRFKQWRESEFLIDALKMNFLLWVVFELENIDVDYSKK RHPLLISTDKGLRVVPVDLFNSMLSVSSSGWIPYVERVCERSEIKRRLNADELKLKNW FIAYYITLPLLRRAEPRMSFKYEGITTWIGSNCGGVRDYLIQMLPARKPKPGVLILAY GAETNVAWLNHALRDILSLEGSLGMIIISDGSVVNKSKLRVRDMKIYNRGEVDRLILI SSGDYTFGNKYLLSKLMAKIEQ" /product="Outer capsid protein" ORIGIN 1 gtttaattca ccatggcgtt cgagtttgga atacttcaga cagataaaat tagagagaat 61 acacttgaaa aaacaaactg tgacgtgatt cttacaaggg agaatagagt gcgaacgagg 121 gaagttgatg gggtgaaagg atattattgg gaagataccg atcacaggtt gggcttatgt 181 gaagttgaac atactgtgtc ggtgagggat tttatgtaca aacaaacgaa atgtgagggg 241 tcatatccga tcgttccttt atatatgatt gatgcaatta aatatggacg aatgatcgat 301 aggaatgatc accagattag agtagacaaa gatgataaaa ctttatctaa gatacaagtg 361 cagccgtact taggtgatgc ctatttctca ccagagcatt acaccgcgac cttctttaaa 421 agagagccgc tgcctattca tgtagatacg atccgagatt acattggaaa acggattaat 481 tatttcgagc gagagttagg gactggggta cgagatgcga atttagaaat gatcgttagg 541 aagtggaagg ataataccta tagaagaatt gaaggtgaaa aaacgacgat gtgtgtgagg 601 catgaaccag attcggtact acagatatta aaaaagatga ggtttgggat gttatatcca 661 aattattata tgttgaatac aggttatata gttactgaat caagtaaggg ggcaccgttg 721 aatcgatggt tggtgaaaga gagaacagtt ggaaaagtca aggcggccga ggcttttgcg 781 ggcaattcgt tattaaaaac cttggcaagc cggatggaag acgaagaatt aagtcgggaa 841 ataatagttg cggtgatcaa ttatggttcg aagttcggga ctaggtccgg gaggaaaaaa 901 gatttgatga caattgataa gcttgaaaaa tactgtgaat ccttaacgac gtttgttcac 961 aaaaagaagc gtgatgaagg tgatgatgaa acagctaggg ctatcattag gaatcaatgg 1021 attaagggaa tgccaagtat gaatttgaaa aaagaaatga aagtttcgcg tggtcctatt 1081 caaaattggt cgttttttat gtctcttgaa gtgtttaaac gtaataataa agttgatatt 1141 gatccaaatc atgatacatg gaaaaaccac gtcaaagaaa tcagagagag gatgcagaaa 1201 gaacagagcg cgaattccaa cgcaccctta aagatccaag ttgatggcgt cagcttatct 1261 acaagtgaat tctacggcac ggtcgaacat tggatagatt gggttgttga tttaattatg 1321 ttagcacagg ttaaacgatt aattaaggag tacaagttta tacgattgga gactacgagc 1381 ttaatggcag gaatgaataa actagtcgga gctttacgtt gctatgccta ctgcttgatt 1441 ctggctctct atgatttcca tggtgcggat atcgaaggtt ttgaaaaggg ttcaaactct 1501 tctgcgatag tagagacagt tgtacagatg ttcccgaact tcaagcagga aattcaagct 1561 aacttcggta taaatttaaa tatcaaagat aagaagcaag tgttgttcgt taggatggat 1621 atggactctg agtttagtga ggatgagcag aaaggatata tgtttgagta cggatgggcg 1681 aaaagggaag agcgaatatg gacgaattac ggtgatatat taactgattt ggtcgaacag 1741 ctttataaga gcattttgga ttatgaggaa tgggagaaaa ttgttgaaga tcctgagagg 1801 tatttctatg atgagctttt taacgcatca ccagagacag tttttattag caaaggttat 1861 gaccttgaca ataatatcgt aattgaggga aaggtaggtc aagatgtcac ctatttttcg 1921 aaacggtttg tatcatattg gtatcgagtt cgacaggttc aaacttcaaa gggtattgag 1981 aggaggtcga ttgaggatgt caaatataga gagtttgata tagaaaattt caagccttac 2041 gctatcggcg agatcggtat tcacgcatca acttacaagt atcaggatct actagcgggg 2101 cgtaatcgcg gagaaaaagt gaaagattcg caagcgctcg tgtggtatga tcttgctttg 2161 actaattaca cactagtgcg gccacaagat agatgttgga taatgtcgtg tactgactct 2221 gaatacactt tgaggtttgc gacgatcact atgatattcg agcgcttatc tgaggagact 2281 gatctttctt atcatgatat tttattgagg gttcgcgaat atccgattca atcattcgct 2341 tcgtacaaac atttctatgt tcgcgtatta caacacgttt ttagagacta ccaagagatc 2401 gacgtattag agttctgtac tagaatgctc gatccgagga cacgtgagtc ggggctcaac 2461 aagttctcga gattcaaaca atggagagaa tcggaattct tgatagatgc tcttaagatg 2521 aattttctcc tgtgggtagt ttttgaactg gaaaatatag acgttgatta tagcaagaag 2581 aggcacccct tactgatatc tactgacaaa ggattaagag tagttccagt tgaccttttc 2641 aattccatgc ttagtgtctc ttcgagcggg tggattccat atgttgaaag agtctgtgag 2701 cgttcggaga ttaaaaggag attgaatgca gatgaattga aattaaagaa ctggttcatt 2761 gcgtattata tcactttgcc cttgttaagg cgtgcggaac cgagaatgag cttcaagtat 2821 gaaggaatta caacttggat tggttcaaac tgtggtgggg tacgagatta tctaattcag 2881 atgctcccag cgaggaaacc gaagccaggc gttttaattt tagcttatgg cgcggagact 2941 aatgtagcgt ggttgaacca tgcgttacgt gatatacttt cgctagaggg gtcgttaggg 3001 atgattatta tcagtgatgg ttcagtggtg aataaaagta agctccgtgt gagagatatg 3061 aagatatata ataggggaga agtagacaga ttaattttga tttcaagtgg ggattacaca 3121 tttgggaaca aatatctctt atcgaaattg atggctaaga ttgaacagta gcgtgactgc 3181 tactccatgt gaatacactt ac //