LOCUS KF963087 3202 bp RNA linear VRL 31-DEC-2015 DEFINITION African horse sickness virus 9 isolate ETH2010/17 Outer capsid protein (VP2) gene, complete cds. ACCESSION KF963087 VERSION KF963087.1 KEYWORDS . SOURCE African horse sickness virus 9 ORGANISM African horse sickness virus 9 Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus. REFERENCE 1 (bases 1 to 3202) AUTHORS Bachanek-Bankowska,K., Maan,S., Gelaye,E., Ayelet,G., Jenberie,S., Sutton,G., Aklilu,N., Oura,C., Batten,C. and Mertens,P.P.C. TITLE Sequencing and molecular typing of African horse sickness virus isolates from outbreaks in Ethiopia during 2010 JOURNAL Unpublished REFERENCE 2 (bases 1 to 3202) AUTHORS Bachanek-Bankowska,K. TITLE Direct Submission JOURNAL Submitted (13-DEC-2013) The Pirbright Institute, Ash Road, Pirbright, Woking, Surrey GU24 0NF, United Kingdom COMMENT ##Assembly-Data-START## Assembly Method :: Lasergene v. 10 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3202 /mol_type="genomic RNA" /country="Ethiopia" /segment="2" /collection_date="2010" /host="horse" /db_xref="taxon:10897" /isolate="ETH2010/17" /serotype="9" /organism="African horse sickness virus 9" gene 1..3202 /gene="VP2" CDS 13..3171 /codon_start=1 /protein_id="AIX10307.1" /gene="VP2" /translation="MAFEFGILQTDKIKENTLEKTNCDVILTRENRVRTREVDGVKGY CWEDTDHRLGLCEVEHTVSVRDFMYKQTKCEGSYPVVPLYMIDAIKYGRVIDRNDHQI RVDKDDKTLSKIQVQPYLGDAYFSPEHYTATFFKREPLPIHIDTIRDYIGKRINYFER ELGSGVRDANLEIIVGKWKDNTYRRIESEKTTMCVRHEPDSVLQILKKMRFGMLYPNY YMLNTGYIVTESSKGAPLNRWLVKERTVGKVKAAEAFAGNSLLKNLASRMEDEELSRE MIVAVINYGSKFGARSGKKKDLMTIDKLEKYCESLTTFVHKKKRDEGDDETARAIIRN QWIKGMPSMNLKKEMKVSRGPIQNWSFFMSLEVFKRNNKVDIDPNHDTWKNHVKEVRE KMQREQSANSNSPLKIQVDGVSLSTSEFYGTVEHWIDWVVDLIMLAQVKRLIKEYKFI RLETTSLMAGMNKLVGALRCYAYCLILALYDFYGADIEGFEKGSNSSAIVETVVQMFP NFKQEIQANFGINLNIEDKKQALFVRTDMDSEFSEDEQKGYMFEYGWAKREERIWTNY GDILTDLVEQLYKSILNHEEXEKIVDDPERYFYDELFNASPETVFISKGYDLDNNIVI EGKIGQDVTYFSKRFVSYWYRVRQVQTSKGIERRSIEDVKYREFDIESFKPYAIGEIG IHASTYKYQDLLAGRNRGEKVKDSQALVWYDLALTNYTLVRPQDRCWIMSCTDSEYTL RFAIVTMIFERLSEETDLSYHDILLRVREYPIQSFASYKHFYVRVLQHVFRDHQEIDI LEFCTRMLDPRTRESGLNKFSRFKQWRESEFLIDALKMNFLLWVVFELENIDVDYSRK RHPLLISTDKGLRVVPVDLFNSMLSVSSSGWIPYVERVCERSEIKRRLNADELRLKNW FIAYYITLPLLRRAEPRMSFKYEGITTWIGSNCGGVRDYLIQMLPARKPKPGVLILAY GAETNVAWLNHALRDILSLEGSLGMIIISDGSVVNKSKLRVRDMKIYNRGEVDRLILI SSGDYTFGNKYLLSKLMAKIEQ" /product="Outer capsid protein" ORIGIN 1 gtttaattca ccatggcgtt cgagtttgga atacttcaga cagataaaat caaagagaat 61 acacttgaaa aaacaaactg cgacgtgatt cttacgagag agaatagagt gcgaacgaga 121 gaagttgatg gagtgaaagg atattgttgg gaggataccg accacaggtt gggcttatgt 181 gaggtcgaac atactgtgtc ggtgagggac tttatgtaca aacaaacgaa atgcgaaggg 241 tcatatccgg tcgtgccttt atatatgatt gatgcaatta aatatggacg agtgatcgat 301 agaaatgacc accaaattag agtagacaaa gatgataaaa ctctatctaa gatacaagtg 361 cagccgtact taggcgatgc ctatttctct ccagagcatt acaccgcgac cttctttaaa 421 agagagccgc tccctattca tatagatacg attcgggatt acattggaaa acggattaat 481 tatttcgagc gagagttagg tagtggggta cgagatgcga acttagaaat aattgttggg 541 aagtggaagg ataataccta tagaaggatt gaaagtgaaa aaacgacgat gtgcgtgagg 601 catgaaccag attcggtact acagatatta aaaaagatga ggtttggaat gttatacccg 661 aattattata tgttgaatac aggttatata gttactgaat caagtaaggg ggcaccgttg 721 aatcgatggt tggtgaaaga gagaacagtt ggaaaagtca aggcggccga agccttcgcg 781 ggcaattcgt tattaaagaa cttggcaagc cggatggaag acgaagaatt gagtcgggaa 841 atgatagttg cggtgatcaa ttatggttcg aagttcgggg ctaggtccgg gaagaaaaaa 901 gatttgatga ccattgataa gcttgaaaaa tactgtgaat ccttaacgac gttcgttcac 961 aaaaagaagc gtgatgaagg tgatgatgaa acagctaggg ctatcattag gaatcaatgg 1021 attaagggaa tgccaagtat gaatttgaaa aaagaaatga aagtctcgcg tggtcctatt 1081 caaaattggt cgttttttat gtcccttgag gtgtttaaac gtaataataa agttgatatt 1141 gatccaaatc atgatacatg gaaaaaccat gtcaaagaag tcagagagaa gatgcagagg 1201 gaacagagcg cgaactctaa ctcaccccta aagatccaag ttgatggcgt cagcttatct 1261 acaagtgaat tttacggcac ggtcgaacat tggatagatt gggttgttga tttaattatg 1321 ttagcacagg ttaaacgatt aattaaggag tacaagttta taagattaga gactacgagc 1381 ttaatggcag gaatgaataa attagtcgga gctttacgtt gctatgccta ctgcttgatt 1441 ctggctctct atgatttcta tggtgcggat atcgaaggtt tcgaaaaggg ttcaaactct 1501 tccgcgatag tagagacggt tgtacagatg ttcccgaatt tcaagcagga gattcaagct 1561 aatttcggta taaatttaaa tatcgaagat aaaaagcaag cgttgttcgt taggacggat 1621 atggattctg agtttagtga ggatgagcag aagggatata tgtttgagta tggatgggcg 1681 aaaagggaag agcgaatatg gacaaattac ggtgacatat taactgattt ggtcgaacag 1741 ctttataaga gcattttgaa tcatgaggaa tkggagaaaa tcgttgatga tcctgagagg 1801 tatttctatg atgagctttt taacgcatca ccagagacag ttttcattag taaaggttat 1861 gaccttgata ataacatcgt aattgaaggg aagataggtc aagatgttac ctatttttcg 1921 aaacggtttg tatcatattg gtatcgagtt cgacaggttc aaacctccaa gggtattgag 1981 aggaggtcga ttgaggatgt caaatatagg gagtttgata tagaaagttt taagccttac 2041 gctattggcg agatcggtat tcacgcatca acttacaagt atcaggattt attagcaggg 2101 cgtaatcgcg gagaaaaagt gaaggattcg caagcgctcg tgtggtatga tctcgctttg 2161 actaattaca cactagtgcg gccacaagat agatgttgga taatgtcgtg tactgattct 2221 gaatacactt tgaggttcgc gatagtcact atgatattcg agcgcctatc tgaggagact 2281 gatctttctt atcatgatat tttattgagg gttcgcgaat atccgattca atcattcgct 2341 tcgtacaaac atttctatgt tcgtgtatta cagcacgttt ttagagacca ccaagagatc 2401 gatatattag agttctgtac taggatgctc gatccgagga cacgtgagtc ggggctaaac 2461 aagttttcga gattcaaaca atggagagaa tcggaattct tgatagatgc tcttaagatg 2521 aattttctcc tgtgggtagt ttttgaactg gagaatatag acgttgatta tagcagaaag 2581 aggcaccctt tgctgatatc tactgataaa ggattaagag tagttccagt tgatcttttc 2641 aattctatgc ttagtgtttc ttcgagcggg tggattccat atgttgaaag agtttgtgag 2701 cgttcggaga ttaaaaggag attgaatgca gatgaattga gattaaagaa ctggttcatt 2761 gcgtattata tcactttgcc cttgttaagg cgtgcggagc cgaggatgag ctttaagtat 2821 gaaggaatta caacttggat tggttcaaac tgtggtgggg tacgagatta tctaattcaa 2881 atgctcccag caaggaaacc gaagccaggc gttttaattt tagcttatgg ggcggagact 2941 aacgtagcgt ggctgaacca cgcgctacgt gatatacttt cgttagaagg gtcgttagga 3001 atgattatta tcagtgatgg ctcagtggtg aataaaagca agctccgtgt gagagatatg 3061 aagatatata ataggggaga agtagacaga ttaattttga tttcaagtgg ggattacaca 3121 tttgggaaca aatatctctt atcgaaatta atggctaaga ttgaacagta gcgtgactgc 3181 tactccacgt gaatacactt ac //