LOCUS AF021236 2792 bp mRNA linear VRL 29-MAY-1998 DEFINITION African horse sickness virus capsid VP3 (L3) mRNA, complete cds. ACCESSION AF021236 VERSION AF021236.1 KEYWORDS . SOURCE African horse sickness virus ORGANISM African horse sickness virus Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus. REFERENCE 1 (bases 1 to 2792) AUTHORS Williams,C.F., Inoue,T., Lucus,A.M., Zanotto,P.M. and Roy,P. TITLE The complete sequence of four major structural proteins of African horse sickness virus serotype 6: evolutionary relationships within and between the orbiviruses JOURNAL Virus Res. 53 (1), 53-73 (1998) PUBMED 9617769 REFERENCE 2 (bases 1 to 2792) AUTHORS Williams,C.F., Inoue,T., Lucus,A.-M., Zanotto,P. and Roy,P. TITLE Direct Submission JOURNAL Submitted (28-AUG-1997) Institute of Virology and Environmental Microbiology, Mansfield Road, Oxford OX1 3SR, UK FEATURES Location/Qualifiers source 1..2792 /mol_type="mRNA" /db_xref="taxon:40050" /serotype="6" /organism="African horse sickness virus" gene 1..2792 /gene="L3" CDS 27..2744 /codon_start=1 /protein_id="AAC40995.1" /gene="L3" /translation="MQGNERIQDKNEKEKAYAPYLDGASVSTDNGPILSVFALQEIMQ KIRQNQSDMAAHAPDVDGAIPEVMTIISGIKGLLEEKDYKVINAPPNSFRTIPMQSME YVLQVNTFYERMSEIGGPVDETDPIGFYALILEKLKFLKSEGAFILQGIATKDYRGAE IADPEIIGVSFQNALSHLAAIDRQIIQDTLNGMIIENGLVADRNVDVFRAAMSDPIYR IRNVLQGYIEGIQYGELRESVNWLMRLGLRKRIEFANDFLTDFRRADTIWIISQRLPI NANVIWNVPRCHIANLNTNVALCLPTGEYLMPNPRINSITITQRITQTNPFSIISGLT PTAVQMNDVRKIYLALMFPNQIILDIKPDSSHAVDPVLRMVAGVLGHVMFTYGPIMTN ITPTMAELLDAALSDYLLYMYNNRIPINYGPTGQPLDFRIGARNQYDCNAFRADPQTG RGYNGWGVVDVQRVQPSPYDHVQRVIRYCDIDSREIIDPRTYGMNMTYPIFREMLRML VAAGKDQEAAYLRQMLPFHMIRFARINQIINEDLLSAFSLPDQNFDVVLHNLIQGNFG ETDPVILEVSWASIWFAFVRRFEPIARSDLLEAAPLIEARYAAELSTMQMDVQQLRMM RARVPDTVINATPSQCWKAVLKNAPEPIKNLMNLSHSFSFVNVRDIVRWSQQRDIQES LAYVLNREAWAIANDFEDLMLVDHVYIQRTMLPEPRLDDINEFRRQGFFHTNMIDGAP PIGDVTHYTYAIANLQANMGQFRAAIRRTLDDNGWIQFGGMLRNIKIKFFDSRPPDEI LTAMPYVYTEEERDGVRMVAFKYATTATAYFLLYNVEYSNTPDTLITVNPTFTMTKIH MRKKIVRRVRAPDVLSQVNKRLVAYKGKMRLMDVTKCLKTGVQLARPTI" /product="capsid VP3" ORIGIN 1 gttaattttc tgctgtgaac tccagaatgc aagggaatga gagaatacaa gataaaaatg 61 agaaggagaa ggcgtatgca ccatatcttg acggagcgag cgtatcgacg gataatgggc 121 ccattttatc agtgtttgcc ttacaggaaa tcatgcaaaa aattaggcaa aatcagagcg 181 atatggctgc acatgctccc gatgttgatg gggcgatacc agaggtaatg acaataatca 241 gtggaattaa gggactgctg gaagaaaagg attacaaagt gataaacgcg ccaccgaatt 301 ctttccgcac gatcccgatg caaagtatgg agtatgtttt gcaagtgaac acgttctatg 361 agaggatgtc agaaattgga gggccggtgg atgaaacgga tcctattgga ttttatgcat 421 tgatactgga gaaattgaaa tttttgaaat ccgagggggc tttcatctta caagggatag 481 ctactaaaga ttataggggt gcagagattg cagatccaga aataatcggg gttagtttcc 541 aaaatgcgtt gagtcacttg gcagcaatag atcgtcaaat catacaggat actcttaacg 601 ggatgatcat tgaaaatgga ctagtggcag atagaaatgt ggatgtgttt agagcggcga 661 tgtcggaccc aatctatcgg atacgcaatg tattacaagg atatattgaa ggtatacaat 721 atggggagtt acgtgaatca gtgaattggt tgatgaggct tggactaagg aagagaatcg 781 agtttgccaa cgatttcttg actgatttca gacgcgcaga cactatttgg ataatatcac 841 aaaggttacc gattaatgct aatgtaattt ggaacgttcc aagatgccat atagcaaatc 901 taaacacaaa cgtcgcgtta tgcttgccaa ccggagagta tttgatgccc aacccaagaa 961 ttaattcgat cacaattaca cagcgcatca ctcagactaa tccattttca ataatttcag 1021 ggttaacccc gacagcggtt cagatgaatg atgttaggaa aatatatctt gcgttaatgt 1081 ttcccaacca aattattctg gatataaaac cagacagctc gcatgcggta gatccagttt 1141 tgcgaatggt cgcgggagtg ttgggccatg taatgtttac ttacggaccg atcatgacaa 1201 acataactcc aacgatggct gaattgcttg atgctgcgct gagcgattat ttattatata 1261 tgtataacaa tcggattccg ataaactacg gtccaacagg tcaaccccta gattttcgta 1321 ttggagcaag gaatcagtac gattgtaatg ctttccgagc ggacccacaa acgggtcgag 1381 gttacaacgg gtggggggta gttgatgttc agagagtcca gccgagtcca tatgatcatg 1441 ttcagcgtgt aattcgttac tgtgacattg attcaaggga gatcatagat ccaagaactt 1501 atgggatgaa tatgacatat ccaatatttc gggaaatgct tagaatgctg gtcgctgcgg 1561 ggaaagatca agaagcagct tatttgagac agatgttgcc ctttcatatg attcgtttcg 1621 cgcgaataaa tcaaattata aatgaggatc tgctcagtgc tttctctttg ccagatcaaa 1681 atttcgatgt ggttctacac aacttgatac aaggtaattt tggggaaaca gatccggtaa 1741 ttttagaggt gagttgggct tcgatctggt tcgccttcgt gagacgtttc gaacccatcg 1801 cccgttcaga tttactcgag gcggctcctc tgattgaagc tagatacgca gctgaattat 1861 ccacgatgca gatggatgta cagcagctga ggatgatgcg agctagagtt ccggacacag 1921 tgattaatgc gacgccaagt caatgctgga aagcggtttt gaagaatgcg ccagagccga 1981 ttaaaaattt aatgaatttg tctcattctt tcagttttgt gaatgtgcga gatatcgtaa 2041 ggtggagtca acagagggac attcaggagt cgttagcgta tgtcttgaat agggaagctt 2101 gggcgattgc taatgacttt gaagatttga tgttagtgga ccacgtgtat atacagcgca 2161 cgatgttacc tgaaccgagg ctagacgata tcaacgagtt caggcggcaa ggattcttcc 2221 atacgaatat gatcgatgga gcgccaccaa ttggagatgt tactcactac acctatgcga 2281 ttgcaaatct acaggcgaat atgggacagt ttagagcagc gatcaggcgt acattggatg 2341 ataacggttg gattcagttc ggtggtatgt tacggaatat caagattaaa ttttttgatt 2401 cgcggccgcc cgacgagata ctgacagcaa tgccttatgt gtacacagag gaggagaggg 2461 atggagtaag gatggtcgct tttaaatacg caacaactgc gactgcctat ttcttattgt 2521 ataacgttga atattcaaat acgccagata ctttgatcac agtaaaccca acattcacga 2581 tgacgaagat tcatatgcgg aagaagattg tcagacgagt tcgtgctcca gatgtgctat 2641 cacaggtcaa caaacgttta gtcgcataca aaggtaagat gcgtttaatg gatgtaacga 2701 aatgcctaaa gactggagtt caactcgcgc gaccaacgat ttagcagcct gaccacctgg 2761 tgaatcgttc tagcgggcag aattacactt ac //