LOCUS KP009621 3965 bp RNA linear VRL 23-SEP-2015 DEFINITION African horse sickness virus isolate HS21/07 segment 1, complete sequence. ACCESSION KP009621 VERSION KP009621.1 KEYWORDS . SOURCE African horse sickness virus ORGANISM African horse sickness virus Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus. REFERENCE 1 (bases 1 to 3965) AUTHORS Potgieter,A.C., Wright,I.M. and van Dijk,A.A. TITLE Consensus Sequence of 27 African Horse Sickness Virus Genomes from Viruses Collected over a 76-Year Period (1933 to 2009) JOURNAL Genome Announc 3 (5), e00921-15 (2015) PUBMED 26358586 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3965) AUTHORS Potgieter,C.A. and Wright,I.M. TITLE The genome sequences of the OIE reference strains of African horsesickness virus - comparison to recent and historic AHSV isolates JOURNAL Unpublished REFERENCE 3 (bases 1 to 3965) AUTHORS Potgieter,C.A. and Wright,I.M. TITLE Direct Submission JOURNAL Submitted (13-OCT-2014) Research and Development, Deltamune (Pty) Ltd, 248 Jean Avenue, Lyttelton, Centurion, Pretoria, Gauteng 0140, South Africa COMMENT GenBank Accession Numbers KP009621-KP009630 represent sequences from the 10 segments of African horse sickness virus. ##Assembly-Data-START## Assembly Method :: Lasregene v. 8.1.2 Sequencing Technology :: 454 ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3965 /mol_type="genomic RNA" /country="South Africa" /segment="1" /collection_date="2007" /host="Equus caballus" /db_xref="taxon:40050" /isolate="HS21/07" /serotype="1" /organism="African horse sickness virus" CDS 14..3931 /codon_start=1 /protein_id="AJU57272.1" /translation="MVITVQGADLVRRALNRLFKYGRIDGTKMYYEYYRYSSKMRETR RKKGTKYKTDDEFLERERDAGRLKLYDLQVIREASWEDLLYENVHTAELDIYVRSILK LEDLEPEEEFLRNYAVYDGVHPLKDFVEMRAKNEMQIFGDMPIKAWISVLMEISRETK HKPLGLMVASDFVGRFGSPFEQNFRDLSQINEYGYCYSSPLLFEMCVTESILEFNMWY RMREERIQSLKFGLEVIDPFKLIREFFEICLPHPKKINNTLRSPYSWFVKNWGIGCSK VKVLTSIGGEDRNSKEVFYTGYHETENPYSEIVQKSKFYRESLKQNMTKTEEAISYSQ KLGNHGRTMPIFLKMLKAVYTTEFDPTKISHVILASLCLSIQTITGYGRAWVVNKSSD LEAQMKPSSDNYVQRVCDYTKNNFIKAYEEARRGGEEIVMPEDMYTSILRLAKNTSSG FSTSIDVFKRYGPNAKGGRGEKIQITSRIKALVIFTKGHEIFTPKNLALKYNTTEFFQ TKGSRDVPIKSTRIVYSINLSILVPQLIVTLPLNEYFARVGGSTLPETQRMGGKIIVG DLEATGSRVMDAADTFRNSSDPLNLTIAIDYSEFDTHLTPYNFRNGMLDGIREAMRKY QHLRYEGYTLEQLIEFGYGEGRVMNTLWNGKRRVFKVAFEDYVMLSDEDKTQGTFKPP IGVKPVKNIKICEELEKKADGRDLILVSPTDGSDLALINTHLSGENSTLIANSLHNLA IGTVIREEVKRIFGDDISFKSEQYVGDDTLFYTELRTRSVERFDSIVDTIFEVIKKSG HEASMSKTLIAPFSVEKTQTHAKQGIYVPQDRMMLVSSERRKDIEDVAGYLRSQVQTL TTKISRGFSHELAQIIFMMKSSIIGHRKLKRTIKDGGYRDRKYDDDKEDGFTLIMLRD PLIAFYPVEWNGFGAHPAAMNIIMTEDMFVDSVMRGECRAWMEPLVKLIDQSPPLWNE TSADKRMIGTDSTMSFFSRMARPAVRTVLTNSEVGDAVRSLPLGDFSPFNISKTMMHS ALLKEKNARSLLTPAYEMEYQKELQGWRPRQKKFLVTSNEMEITTNYMKMFNVGKIPL HGLTLKFFPDVNLSKEFFLQKSVLGNRESPRARMSYVDRIDSILRGDVVMRGFITANT IINILEKLGHTHSASDLTTLFEIMNLSSSVAQRLSEYITTERVRFDAMKLSKRGICGD EFSMSLDVCTQTMVDRYIRAPTQFTKTELDAVNLYVAQHIMLDAATGLMPSRYDINVS GDERVRFKQRVARFNTHLPKMRMVKRLIETERLSARLVQNQFV" /product="VP1" /note="RNA dependent RNA polymerase" ORIGIN 1 gtttatttga gcgatggtca tcaccgtgca aggtgcagat ctagtcagga gggctttaaa 61 tcgattattt aagtatggga ggatagatgg aaccaagatg tattatgaat attacagata 121 ttcaagtaaa atgagggaga ctaggaggaa aaaagggacg aagtataaaa cagatgatga 181 gtttttagag cgcgagaggg atgcggggag gttgaagctt tacgatctac aagtgatacg 241 ggaagcatcc tgggaagatt tgttgtacga aaatgttcat actgctgagt tggatattta 301 tgttagatca atcttgaaat tagaggactt agaaccagaa gaagagtttt tgcgaaacta 361 tgcggtttat gatggtgtac acccactgaa ggattttgtt gaaatgagag cgaaaaatga 421 aatgcagatt tttggtgata tgccaattaa ggcgtggatc tcagtattga tggaaatttc 481 gcgcgaaact aagcataaac ctcttgggtt aatggtggct tcggattttg tcggaagatt 541 tggttcgcct tttgaacaga attttagaga tttgtcacag attaacgaat atggttactg 601 ttactcaagt ccattattat ttgagatgtg tgtaactgaa tcaattttgg aatttaatat 661 gtggtaccgg atgcgtgaag aaaggataca gtcgctgaag ttcggattgg aagtgattga 721 ccctttcaaa ctgatacgag aattttttga gatatgtttg ccgcatccta agaagataaa 781 caacacgttg cgctcaccgt attcgtggtt tgtcaagaat tggggtattg ggtgttcgaa 841 agtgaaggtt ttaacatcga ttggaggtga ggatcggaat tcaaaagagg ttttttatac 901 cggttaccat gaaacagaga acccatactc agagattgtc cagaaatcaa aattttatag 961 agaaagcttg aagcaaaata tgacaaaaac ggaggaggcg attagctatt cgcaaaaact 1021 tggtaatcat gggagaacga tgcccatttt cctgaagatg ttgaaagcag tatatactac 1081 agagtttgat ccaacaaaaa taagccacgt tatactggcg tcattatgct taagtataca 1141 aacaataaca gggtatggaa gagcatgggt agttaacaaa tccagtgatc tggaggcgca 1201 gatgaaacca agtagtgaca attatgtaca gcgcgtatgc gattatacga aaaataactt 1261 tataaaagcc tatgaggaag cgaggcgagg gggtgaagag atagtgatgc ctgaagatat 1321 gtatacatcg attttacgtc ttgctaaaaa tacaagctcg ggtttctcaa ctagtattga 1381 tgtttttaaa cggtatggtc ccaacgcgaa gggtggacgt ggagaaaaga ttcaaataac 1441 gtcgcggatt aaagcgttag tcatttttac aaaaggccat gaaatattta cgccgaaaaa 1501 cctagctttg aagtataaca ctactgaatt ttttcaaacg aagggttcga gagatgttcc 1561 gattaagtcg acaaggatag tttattctat caatctctca attttagttc cgcagcttat 1621 agtgacacta cctttgaatg agtatttcgc gagggtgggg ggaagcactt tacctgaaac 1681 tcaacgtatg ggtgggaaaa ttatcgttgg cgatttggag gctacagggt cgcgtgtaat 1741 ggatgctgct gatacattta ggaattcttc agacccactt aacttaacta ttgctattga 1801 ttacagcgaa tttgatacac atttaacacc ttataacttc aggaatggga tgctagacgg 1861 catacgagag gcgatgcgca aatatcaaca tctgagatat gagggttata cattagaaca 1921 attaatagag tttggatatg gagagggtcg cgtaatgaat acattatgga atggaaaaag 1981 gcgagtgttt aaagtggcgt ttgaggatta tgttatgttg agtgatgaag acaaaactca 2041 gggaaccttt aaaccaccaa ttggggtgaa accggtaaag aatattaaaa tttgtgaaga 2101 gctggagaaa aaggcggatg gccgtgatct gattttggtt tcgccgacag atggaagcga 2161 tctagcgctg attaacactc atttatccgg ggagaactct acgttgattg cgaacagcct 2221 acataatcta gcgattggaa cagttattcg tgaggaggtt aagcgcattt ttggcgatga 2281 catttcattt aaatcagaac aatatgttgg tgacgacacc ttattttaca ctgaattgag 2341 aacgcggtca gttgagcggt tcgattcgat cgtggatacc atttttgaag ttattaagaa 2401 gagtggccac gaagcttcga tgtctaagac tcttatagct cccttttcgg tcgaaaaaac 2461 acaaacgcac gctaagcagg gaatatatgt tccacaggat cgaatgatgt tagtttcgtc 2521 cgaacgaaga aaagatatag aggatgttgc tggatatctg agatctcaag ttcaaacgtt 2581 gacgacaaaa attagtcgtg gtttttcgca tgagctggcg cagatcattt ttatgatgaa 2641 gtcgtcgatt atcggacata ggaaactaaa gaggacaatt aaggatggag gatatagaga 2701 taggaaatac gatgatgaca aggaggacgg cttcactctg ataatgttgc gagacccact 2761 tattgctttt tatcccgttg aatggaatgg ctttggagcg cacccrgcag cgatgaatat 2821 aataatgact gaagatatgt tcgtagactc agtgatgaga ggagagtgta gagcatggat 2881 ggaaccttta gttaaattga ttgatcaatc tcctcccttg tggaatgaaa cgagtgcgga 2941 taaaagaatg attggtacgg atagtacgat gtcttttttc tcaagaatgg caaggccagc 3001 agtacggacg gtattaacca actctgaggt gggggatgcc gtaagaagtt tgcctctggg 3061 agacttttct cctttcaata tctctaaaac tatgatgcat tcggcgttat tgaaagaaaa 3121 gaatgcccgt tcattactta ccccagcgta tgagatggag tatcaaaaag agttgcaagg 3181 ttggagacca agacagaaga agttcttagt tacgtcaaat gagatggaaa ttactacaaa 3241 ttatatgaaa atgtttaacg ttggcaaaat tccactacac ggtttgacgt tgaagttttt 3301 cccagatgtt aacttgtcga aagaattttt cttacagaag agtgttttag ggaatagaga 3361 gagtccgaga gcgcgaatgt catatgtcga tagaattgac tcaatactac gtggcgatgt 3421 cgttatgcgg gggtttatca ctgcgaacac tattatcaac atattggaga aattagggca 3481 cacacattcg gcgagtgact taaccacatt atttgagata atgaatttgt catcaagcgt 3541 cgcacagagg ctatccgagt atatcacgac cgaacgcgtt cgcttcgatg ctatgaaact 3601 ctcaaagaga ggcatatgtg gtgacgaatt ctcaatgtca ttggatgttt gcacacaaac 3661 gatggtagat agatacatac gtgcgccgac gcagtttact aagacggagc ttgatgccgt 3721 aaatctatat gttgctcaac atattatgtt agatgcagca actggattga tgccatcacg 3781 atacgatatt aatgtgtctg gggacgaaag ggtacgattt aagcagcgtg ttgcccgatt 3841 taatacacat ttgcctaaga tgcggatggt caaaagatta attgaaacag aaaggttgtc 3901 cgcgagattg gttcagaacc agtttgtctg attagaacta gcacccctca gctcaaaaca 3961 cttac //