LOCUS KF860018 2792 bp RNA linear VRL 23-SEP-2015 DEFINITION African horse sickness virus isolate HS31/62 2S VP3 gene, complete cds. ACCESSION KF860018 VERSION KF860018.1 KEYWORDS . SOURCE African horse sickness virus ORGANISM African horse sickness virus Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus. REFERENCE 1 (bases 1 to 2792) AUTHORS Potgieter,A.C., Wright,I.M. and van Dijk,A.A. TITLE Consensus Sequence of 27 African Horse Sickness Virus Genomes from Viruses Collected over a 76-Year Period (1933 to 2009) JOURNAL Genome Announc 3 (5), e00921-15 (2015) PUBMED 26358586 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2792) AUTHORS Potgieter,C.A., Wright,I.M., van Dijk,A.A. and Erasmus,B.J. TITLE Consensus genome sequence of the nine pathogenic OIE reference strains of African horse sickness virus and comparison of horse sickness viruses collected over a 75 year period JOURNAL Unpublished REFERENCE 3 (bases 1 to 2792) AUTHORS Potgieter,C.A., Wright,I.M., van Dijk,A.A. and Erasmus,B.J. TITLE Direct Submission JOURNAL Submitted (12-NOV-2013) Research and Development, Deltamune (Pty) Ltd, 248 Jean Avenue, Lyttelton, Centurion, Pretoria, Gauteng 0001, South Africa COMMENT ##Assembly-Data-START## Assembly Method :: Lasergene v. 8.0 Sequencing Technology :: 454 ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..2792 /mol_type="genomic RNA" /country="South Africa" /collection_date="1962" /host="Equus caballus" /db_xref="taxon:40050" /isolate="HS31/62 2S" /serotype="7" /organism="African horse sickness virus" CDS 27..2744 /codon_start=1 /protein_id="AHI44013.1" /translation="MQGNERIQDKNEKEKAYAPYLDGASVSTDNGPILSVFALQEIMQ KIRQNQSDMAAHAPDVDGAIPEVMTIISGIKGLLEEKDYKVINAPPNSFRTIPMQSTE YVLQVNTFYERMSEIGGPVDETDPIGFYALILEKLKFLKSEGAFILQGIATKDYRGAE IADPEIIGVSFQNALSHLAAIDRQIIQDTLNGMIIENGLVADRNVDVFRAAMSDPIYR IHNVLQGYIEGIQYGELRESVNWLMRLGLRKRIEFANDFLTDFRRADTIWIISQRLPI NANVIWNVPRCHIANLITNVALCLPTGEYLMPNPRINSITITQRITQTNPFSIISGLT PTAVQMNDVRKIYLALMFPNQIILDIKPDSSHAVDPVLRMVAGVLGHVMFTYGPIMTN ITPTMAELLDAALSDYLLYMYNNRIPINYGPTGQPLDFRIGARNQYDCNAFRADPQTG RGYNGWGVVDVQRVQPSPYDHVQRVIRYCDIDSREIIDPRTYGMNMTYPIFREMLRML VAAGKDQEAAYLRQMLPFHMIRFARINQIINEDLLSAFSLPDQNFDVVLHNLIQGNFG ETDPVVLEVSWASIWFAFVRRFEPIARSDLLEAAPLIEARYAAELSTMQMDVQQLRMM RARVPDTVINATPSQCWKAVLKNAPEPIKNLMNLSHSFSFVNVRDIVRWSQQRDIQES LAYVLNREAWAIANDFEDLMLVDHVYIQRTMLPEPRLDDINEFRRQGFFHTNMIDGAP PIGDVTHYTYAIANLQANMGQFRAAIRRTLDDNGWIQFGGMLRNIKIKFFDSRPPDEI LTAMPYVYTEEERDGVRMVAFKYATTATAYFLLYNVEYSNTPDTLITVNPTFTMTKIH MRKKIVRRVRAPDVLSQVNKRLVAYKGKMRLMDVTKCLKTGVQLARPTI" /product="VP3" ORIGIN 1 gtttattttc tgctgtgaac tccagaatgc aagggaatga aagaatacaa gataaaaatg 61 agaaggagaa ggcgtatgca ccatatcttg acggagcgag cgtatcaacg gataatgggc 121 ccattttatc agtgtttgcc ttacaggaaa tcatgcaaaa aattaggcaa aatcagagcg 181 atatggctgc acatgctccc gatgttgatg gggcgatacc agaggtaatg actataatca 241 gtggaattaa gggattgctg gaagaaaagg attacaaagt aataaacgcg ccaccgaatt 301 cttttcgcac gatcccgatg cagagtacgg agtatgtttt gcaagtgaac acgttttatg 361 agaggatgtc ggaaattgga gggccggtgg atgaaacgga tccaattgga ttttatgcat 421 tgatactgga gaaattgaaa tttttgaaat ccgagggggc tttcatcttg caggggatag 481 ctactaaaga ttataggggt gcagagatcg cagatccaga gataatcggg gttagcttcc 541 aaaatgcttt gagtcatttg gcggcaatag atcgtcaaat catacaggat actctcaacg 601 ggatgatcat tgaaaatgga ttagtggcag atagaaatgt ggatgtgttt agagcggcga 661 tgtcggaccc aatctatcgg atacacaatg tattacaagg atatattgaa ggtatacaat 721 atggggagtt gcgtgaatcg gtcaattggt tgatgaggct tggactaagg aagagaatcg 781 agtttgccaa cgatttcttg actgatttta gacgcgcgga cactatttgg ataatatcac 841 aaaggttacc gattaatgct aatgtaattt ggaatgttcc aagatgccat atagcgaatc 901 taatcacaaa tgtcgcgtta tgcttaccga ctggagagta tttgatgccc aacccaagaa 961 ttaattcgat cacaatcaca cagcgtatca ctcagactaa tccattttca ataatttcag 1021 ggttaacccc gacagcggtt caaatgaatg atgttagaaa aatatatctt gcattaatgt 1081 ttcccaacca aattattctg gatataaaac cagacagctc gcatgcggta gatccagttt 1141 tgcgaatggt tgcgggagta ttgggccatg taatgtttac ttacggaccg atcatgacaa 1201 acataactcc aacgatggct gaattgcttg atgctgcgct gagcgattat ttattgtaca 1261 tgtataacaa tcggattcct ataaattacg gtccaacagg tcaaccccta gattttcgca 1321 ttggagcaag aaatcagtat gattgtaacg ctttccgggc ggacccacaa acgggtcgag 1381 gttacaacgg gtggggggtg gttgatgttc agagagtcca gccgagtcca tatgatcatg 1441 ttcaacgtgt aatccgttac tgtgacattg attcaaggga gatcatagat ccaagaactt 1501 atgggatgaa tatgacatat ccaatatttc gggaaatgct tagaatgcta gttgctgcgg 1561 gaaaagatca agaagcagct tatttgagac agatgctgcc ttttcatatg attcgtttcg 1621 cgcgaataaa tcaaattata aatgaagatt tgctcagtgc tttctctctg ccagatcaaa 1681 atttcgatgt agttctacac aacttgatac aaggtaattt tggagaaacg gatccggtag 1741 ttttggaggt gagttgggct tcgatctggt tcgccttcgt gaggcgtttc gaacccatcg 1801 cccgttcaga tttacttgag gcagctcctc tgattgaagc tagatatgca gctgaattat 1861 ccacgatgca gatggatgta cagcagctga ggatgatgcg agccagagtc ccggacactg 1921 tgattaatgc gacgccaagt caatgctgga aagcggtctt gaagaatgcg ccagagccaa 1981 ttaaaaattt aatgaacttg tctcattctt tcagttttgt gaatgtacga gatattgtaa 2041 ggtggagtca acagagggac attcaggagt cgttagcgta tgttttgaat agggaagctt 2101 gggcgattgc taatgacttt gaagacttga tgttagtgga tcacgtgtat atacagcgca 2161 cgatgttacc tgaacctagg ttagacgata tcaacgagtt caggcggcaa ggattcttcc 2221 atacgaatat gatcgatgga gcgccaccaa ttggagatgt tactcactac acctatgcga 2281 ttgcaaatct acaggcgaat atgggacagt tcagagcggc gatcaggcgt acactggatg 2341 ataacggttg gattcagttt ggtggtatgt tacgaaatat caagatcaaa ttttttgatt 2401 cgcggccgcc cgacgagata ctgacggcaa tgccttatgt gtacacggag gaggagaggg 2461 atggagtgag gatggtcgct tttaaatacg cgacaaccgc gactgcctat ttcttattgt 2521 ataacgttga gtattcaaat acgccagata ctttgatcac agtgaaccca acatttacga 2581 tgacgaaaat tcatatgcga aagaaaattg tccgacgagt tcgcgctcca gatgtgctat 2641 cacaagttaa caaacgttta gtcgcgtaca aaggtaagat gcgcttaatg gatgtaacga 2701 aatgcctaaa gactggagtt caactcgcgc gaccaacgat ttagcagcct gaccacctgg 2761 tgaatcgttc tagcgggcag aattacactt ac //