LOCUS       FJ196587                1978 bp    RNA     linear   VRL 21-MAY-2009
DEFINITION  African horsesickness virus isolate HS 02/07 structural protein
            VP4 gene, complete cds.
ACCESSION   FJ196587
VERSION     FJ196587.1
KEYWORDS    .
SOURCE      African horse sickness virus
  ORGANISM  African horse sickness virus
            Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus.
REFERENCE   1  (bases 1 to 1978)
  AUTHORS   Fasina,F., Potgieter,A.C., Ibironke,A., Bako,B., Bwala,D. and
            Kumbish,P.
  TITLE     First Report of an Outbreak of African Horsesickness Virus
            Serotype 2 in the Northern Hemisphere
  JOURNAL   J. Equine Vet. Sci. 28 (3), 167-170 (2008)
REFERENCE   2  (bases 1 to 1978)
  AUTHORS   Potgieter,A.C., Page,N.A., Liebenberg,J., Wright,I.M., Landt,O.
            and van Dijk,A.A.
  TITLE     Improved strategies for sequence-independent amplification and
            sequencing of viral double-stranded RNA genomes
  JOURNAL   J. Gen. Virol. 90 (PT 6), 1423-1432 (2009)
   PUBMED   19264638
REFERENCE   3  (bases 1 to 1978)
  AUTHORS   Potgieter,A.C., Fasina,F. and van der Sluis,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2008) Virology, ARC-Onderstepoort Veterinary
            Institute, 100 Old Soutpan Road, Pretoria, Gauteng 0110, South
            Africa
COMMENT     GenBank Accession Numbers FJ196584-FJ196593 represent the complete
            genome of African horsesickness virus isolate HS 02/07.
FEATURES             Location/Qualifiers
     source          1..1978
                     /mol_type="genomic RNA"
                     /country="Nigeria"
                     /host="horse"
                     /db_xref="taxon:40050"
                     /isolate="HS 02/07"
                     /serotype="2"
                     /organism="African horse sickness virus"
     CDS             12..1940
                     /codon_start=1
                     /protein_id="ACI41993.1"
                     /translation="MEPYAILYVTQEIEYLLKDSFLPKWELDGIRDLNTLWLERGRMA
                     CDTYAVGKIDQWSVRQLRAHRFLFISTKRKIRLKDCTISPDIFILKKELREYDMKRFE
                     TLIGRRRVTLRKSFGNMLRAYAFQHVTILHGSEAETLSYADPKRHVVKGQPKAAPMYD
                     HPDKWWRDVDDGPTDKKLVSMLDYIIYSADEVYYVGCGDLKTLEQFASRDRKRFDRIR
                     WICIDPIAPETSYANVKIVKEKVVSARDLKHYLMRDEVERLLIWDVSADGLKGTIEWE
                     KQRFKEDRNGENIAEALCTDFALALIKHRIPEESDEYICRSSWLLPQPGAPITMYELR
                     NLMRLDGFSHVERKHIPRAYVRKIDAEVARRLVEEYHGEDVGRLLKRSLYEDIHIERA
                     DGLTDGDERTRADLFYLTNMRNAAFMHDVYRVVEKSFISTLWVSSRQNFTYDDVPVNR
                     NFITLRFSKKNRRVLDGNGAILFLMWQHPKDFPKTTNYDPSWAENYAVIFYHALTNPV
                     PDLSLCRFIGLRLMSSTLRINSDRAHQVTDILKKLGLDVSGHLFICLMSNSYVADLDW
                     WFRMILEWSVKDREGKLAALSEAKAELIEWKDEKADEPWHIKNDLLAALFEFMYFAKH
                     FEINEGYVESWIQYLRNA"
                     /product="structural protein VP4"
ORIGIN      
        1 gtttatttag gatggaacct tacgcaatat tgtatgttac gcaggagatc gaatacctac
       61 tcaaagatag ttttcttcca aagtgggaac ttgatggaat cagggatctt aatacattat
      121 ggttggagag gggcagaatg gcgtgtgaca catacgcagt tggaaaaatt gatcaatggt
      181 cggtacggca gctacgcgcg catagatttt tgttcataag tacgaagagg aaaatcaggt
      241 tgaaggattg cactatttcc cccgacatat tcattctgaa aaaagaatta agggagtatg
      301 atatgaagag atttgaaacg ttaattggca gaagaagggt aacgttaagg aagagtttcg
      361 ggaatatgtt aagggcttat gctttccaac acgtgactat tctacatggg agtgaggcgg
      421 aaacgttgag ttatgcggat ccgaagagac acgtcgtgaa aggccagcct aaagctgctc
      481 caatgtatga tcatccagac aaatggtggc gggatgttga tgatggacca accgataaga
      541 aattagttag tatgcttgat tacattatat atagtgcgga cgaagtgtat tatgtcggat
      601 gtggtgattt aaaaacactt gaacaattcg cgtctagaga taggaagcgg tttgacagaa
      661 tcaggtggat atgcatagat ccaatcgctc cagaaacatc gtacgcaaat gtaaagattg
      721 taaaagaaaa agttgtgtca gcgcgtgatt tgaaacatta tttaatgcgc gatgaggtcg
      781 agcgattatt aatttgggat gtgagtgcag atgggctgaa ggggacaatt gagtgggaga
      841 aacagagatt taaggaggat cgtaatggtg aaaacatcgc agaagcgttg tgcacagatt
      901 ttgctttagc tttgattaaa catcgaatac cagaagagag tgatgaatac atttgcagga
      961 gctcttggct actgccacag cccggggccc caataacgat gtatgagcta cgaaatctca
     1021 tgcgtttgga cggattttca catgtcgaaa ggaaacacat accaagagcg tacgtccgga
     1081 aaatcgatgc ggaagttgcg agaagattag ttgaagagta tcacggagaa gatgtagggc
     1141 gattgttgaa acgatcttta tatgaagata tacatattga gcgcgctgat gggttgacgg
     1201 acggtgatga gagaacgaga gcggatctct tttacttaac gaatatgcgg aatgctgcgt
     1261 ttatgcatga tgtatatcga gtagttgaaa aaagttttat ttctaccttg tgggtttcga
     1321 gcaggcagaa tttcacatat gatgatgttc cggttaatag gaattttatt acattacgct
     1381 tttcaaagaa gaatcgacga gtgctcgacg ggaatggagc gattttgttt ttgatgtggc
     1441 agcatccaaa ggattttcca aaaactacga actatgaccc cagttgggcg gagaactatg
     1501 ctgtcatttt ctatcatgca ttaacgaacc cggttccgga tctttcatta tgcagattta
     1561 ttggattaag gctaatgtct tcaactttga ggataaattc agatcgtgca catcaagtga
     1621 ctgatatctt gaagaaattg ggcttggacg tatcaggtca tctatttatt tgtttgatgt
     1681 caaattcata tgttgctgat cttgattggt ggtttcgcat gatcctagaa tggtcagtta
     1741 aggatagaga ggggaagcta gcggcgttaa gtgaggcgaa ggcggaactc attgagtgga
     1801 aggatgaaaa agcagacgag ccttggcaca taaaaaatga tttgctggcg gcgttatttg
     1861 agtttatgta ctttgcgaag cattttgaga taaacgaggg gtatgtcgaa tcctggatac
     1921 aatatctgcg taacgcttaa aggtgacact tagcgagggg gaatcctaat aaccttac
//