LOCUS       FJ196589                1565 bp    RNA     linear   VRL 21-MAY-2009
DEFINITION  African horsesickness virus isolate HS 02/07 structural protein
            VP5 gene, complete cds.
ACCESSION   FJ196589
VERSION     FJ196589.1
KEYWORDS    .
SOURCE      African horse sickness virus
  ORGANISM  African horse sickness virus
            Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus.
REFERENCE   1  (bases 1 to 1565)
  AUTHORS   Fasina,F., Potgieter,A.C., Ibironke,A., Bako,B., Bwala,D. and
            Kumbish,P.
  TITLE     First Report of an Outbreak of African Horsesickness Virus
            Serotype 2 in the Northern Hemisphere
  JOURNAL   J. Equine Vet. Sci. 28 (3), 167-170 (2008)
REFERENCE   2  (bases 1 to 1565)
  AUTHORS   Potgieter,A.C., Page,N.A., Liebenberg,J., Wright,I.M., Landt,O.
            and van Dijk,A.A.
  TITLE     Improved strategies for sequence-independent amplification and
            sequencing of viral double-stranded RNA genomes
  JOURNAL   J. Gen. Virol. 90 (PT 6), 1423-1432 (2009)
   PUBMED   19264638
REFERENCE   3  (bases 1 to 1565)
  AUTHORS   Potgieter,A.C., Fasina,F. and van der Sluis,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (08-SEP-2008) Virology, ARC-Onderstepoort Veterinary
            Institute, 100 Old Soutpan Road, Pretoria, Gauteng 0110, South
            Africa
COMMENT     GenBank Accession Numbers FJ196584-FJ196593 represent the complete
            genome of African horsesickness virus isolate HS 02/07.
FEATURES             Location/Qualifiers
     source          1..1565
                     /mol_type="genomic RNA"
                     /country="Nigeria"
                     /host="horse"
                     /db_xref="taxon:40050"
                     /isolate="HS 02/07"
                     /serotype="2"
                     /organism="African horse sickness virus"
     CDS             21..1538
                     /codon_start=1
                     /protein_id="ACI41995.1"
                     /translation="MGKFTSFLKRAGTATKRALSSDAAKKMYKTAGRALQRVVESEIG
                     SAAIDGVMQGTIQSIIQGENLGDSIKQAVILNVAGTLESAPDPLSPGEQILYGKVHEI
                     ERMEKEDRVIAAHAEDIEKEFGKELMKIRKIVKGEEKIEELEGKEVEYVEKALDGLLK
                     IGKNQSKRITNLYKALQTEEQLRTEDEIAMISDYKEKFGALKEAIQIEQQAANEEAIQ
                     EMLDISADVIETASEEVPIFGAAAANVVATTRAIEGGLKLKEIIDKLTGIDLSHLKVA
                     EIHPHVIGQAIGKNDVDDKTLAVAIKSKVDAVDEMNQETEHVIQSILPLVKREYEKHE
                     NKFNIKIPSALKIHSEHTPKVHIYTTPWDSDKVFICRCIAPHHQQRSFMIGFDLEIEY
                     VYYEDTSVEAHIMHGGAVMIEGRGFRQAYSEFMGVAWSMPETPELHKRRMQRNQGSHP
                     IYMGSMDYTISFDQLSTNALQLVHNTDLQMHCLRGPIKFQRRTIMNALLFGVKIS"
                     /product="structural protein VP5"
ORIGIN      
        1 gtttattttt tccagaagcc atgggtaaat tcacttcgtt tttgaagcgc gcgggaaccg
       61 cgacaaaaag ggcgttaagc tcagatgcgg cgaagaaaat gtataaaacg gctggaaggg
      121 cattacagag agtggtcgaa agtgagattg gaagcgccgc tatcgatgga gtgatgcagg
      181 ggacaattca aagcattata caaggagaaa acttgggaga ttcaataaaa caagcagtga
      241 ttttaaatgt tgcaggsact ttagaatctg cgccagatcc tttgagtcct ggagaacaga
      301 tcttatatgg taaggttcat gagatcgaaa ggatggagaa agaggaccga gtcatcgctg
      361 cacatgcgga agacattgaa aaagagttcg gaaaggagct gatgaagatt cggaagatag
      421 tgaaagggga agagaagatc gaagagttgg agggcaaaga agtagagtat gttgaaaaag
      481 ctcttgatgg attgttaaaa attgggaaaa atcaatcgaa acggataact aacttgtata
      541 aagctttgca aacagaagaa caattgagaa cagaggatga aatcgcgatg attagcgatt
      601 ataaggagaa gttcggagcg ttgaaagaag cgattcaaat tgaacagcaa gctgcgaatg
      661 aggaggcaat acaggagatg cttgacataa gtgcggatgt gatcgaaaca gcaagcgagg
      721 aggttccaat ttttggcgcc gctgccgcaa atgtcgtcgc gacaacgcgc gcaatagagg
      781 gagggttaaa attgaaggaa attattgata aattaactgg tattgatttg tcgcatctca
      841 aggttgctga gattcatcct catgtgattg gtcaagcgat aggtaaaaat gatgtcgatg
      901 ataaaacgct agcggttgca attaagtcaa aggtagatgc agttgatgaa atgaatcagg
      961 aaacagaaca cgtgatacaa tctatattac ccttagtaaa acgggagtat gagaagcatg
     1021 agaataagtt taacatcaag attccttctg cccttaagat acactcagag cacacaccga
     1081 aagttcatat atatacaacc ccttgggatt ctgataaagt atttatttgc cggtgcattg
     1141 caccacacca tcagcagcgc agctttatga tcggttttga ccttgaaatt gaatacgtat
     1201 attatgaaga tacatcagtt gaggctcaca taatgcatgg gggtgcggta atgatcgaag
     1261 gacgtgggtt tagacaagct tatagcgaat tcatgggggt cgcgtggtcg atgccggaaa
     1321 caccagaatt gcataagcgt cggatgcaaa gaaatcaagg atcgcacccg atatacatgg
     1381 gttcgatgga ttatacaatt agttttgatc aacttagcac caacgcacta cagctggtgc
     1441 ataacactga tctgcagatg cattgtttac gaggaccgat aaaatttcaa cggcggacga
     1501 taatgaacgc gcttcttttt ggagtgaaaa tctcgtagga gcctgtgggc gggaaaaaca
     1561 cttac
//