LOCUS KF859998 2792 bp RNA linear VRL 23-SEP-2015 DEFINITION African horse sickness virus isolate HS 82/61 VP3 gene, complete cds. ACCESSION KF859998 VERSION KF859998.1 KEYWORDS . SOURCE African horse sickness virus ORGANISM African horse sickness virus Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus. REFERENCE 1 (bases 1 to 2792) AUTHORS Potgieter,A.C., Wright,I.M. and van Dijk,A.A. TITLE Consensus Sequence of 27 African Horse Sickness Virus Genomes from Viruses Collected over a 76-Year Period (1933 to 2009) JOURNAL Genome Announc 3 (5), e00921-15 (2015) PUBMED 26358586 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2792) AUTHORS Potgieter,C.A., Wright,I.M., van Dijk,A.A. and Erasmus,B.J. TITLE Consensus genome sequence of the nine pathogenic OIE reference strains of African horse sickness virus and comparison of horse sickness viruses collected over a 75 year period JOURNAL Unpublished REFERENCE 3 (bases 1 to 2792) AUTHORS Potgieter,C.A., Wright,I.M., van Dijk,A.A. and Erasmus,B.J. TITLE Direct Submission JOURNAL Submitted (12-NOV-2013) Research and Development, Deltamune (Pty) Ltd, 248 Jean Avenue, Lyttelton, Centurion, Pretoria, Gauteng 0001, South Africa COMMENT ##Assembly-Data-START## Assembly Method :: Lasergene v. 8.0 Sequencing Technology :: 454 ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..2792 /mol_type="genomic RNA" /country="South Africa" /collection_date="1961" /host="Equus caballus" /db_xref="taxon:40050" /isolate="HS 82/61" /serotype="2" /organism="African horse sickness virus" CDS 27..2744 /codon_start=1 /protein_id="AHI44011.1" /translation="MQGNERIQDKNEKEKAYAPYLDGASVSTDNGPILSVFALQEIMQ KIRQNQSDMAAHAPDVDGAIPEVMTIISGIKGLLEEKDYKVINAPPNSFRTIPMQSTE YVLQVNTFYERMSEIGGPVDETDPIGFXALILEKLKFLKSEGAFILQGIATKDYRGAE IADPEIIGVSFQNALSHLAAIDRQIIQDTLNGMIIENGLVADRNVDVFRAAMSDPIYR IHNVLQGYIEGIQYGELRESVNWLMRLGLRKRIEFANDFLTDFRRADTIWIISQRLPI NANVIWNVPRCHIANLITNVALCLPTGEYLMPNPRINSITITQRITQTNPFSIISGLT PTAVQMNDVRKIYLALMFPNQIILDIKPDSSHAVDPVLRMVAGVLGHVMFTYGPIMTN ITPTMAELLDAALSDYLLYMYNNRIPINYGPTGQPLDFRIGARNQYDCNAFRADPQTG RGYNGWGVVDVQRVQPSPYDHVQRVIRYCDIDSREIIDPRTYGMNMTYPIFREMLRML VAAGKDQEAAYLRQMLPFHMIRFARINQIINEDLLSAFSLPDQNFDVVLHNLIQGNFG ETDPVVLEVSWASIWFAFVRRFEPIARSDLLEAAPLIEARYAAELSTMQMDVQQLRMM RARVPDTVINATPSQCWKAVLKNAPEPIKNLMNLSHSFSFVNVRDIVRWSQQRDIQES LAYVLNREAWAIANDFEDLMLVDHVYIQRTMLPEPRLDDINEFRRQGFFHTNMIDGAP PIGDVTHYTYAIANLQANMGQFRAAIRRTLDDNGWIQFGGMLRNIKIKFFDSRPPDEI LTAMPYVYTEEERDGVRMVAFKYATTATAYFLLYNVEYSNTPDTLITVNPTFTMTKIH MRKKIVRRVRAPDVLSQVNKRLVAYKGKMRLMDVTKCLKTGVQLARPTI" /product="VP3" ORIGIN 1 gtttattttc tgctgtgaac tccagaatgc aagggaatga aagaatacaa gataaaaatg 61 agaaggagaa ggcgtatgca ccatatcttg acggagcgag cgtatcaacg gataatgggc 121 ccattttatc agtgtttgcc ttacaggaaa tcatgcaaaa gattaggcaa aatcagagcg 181 atatggctgc acatgctccc gatgttgatg gggcgatacc agaggtaatg actataatca 241 gtggaattaa gggattgttg gaagaaaagg attacaaagt gataaacgcg ccaccgaatt 301 cgtttcgcac gatcccgatg caaagtacgg agtatgtttt gcaagtgaac acgttttatg 361 agaggatgtc agaaattgga gggccggtcg atgaaacgga tcctattgga tttyatgcat 421 taatactgga gaagttgaaa tttttgaaat ccgagggggc tttcatctta caggggattg 481 ctactaaaga ttataggggc gcagagattg cagatccaga gataatcggg gttagtttcc 541 aaaatgcgtt gagtcatttg gcagcaatag atcgtcaaat catacaggat actctcaacg 601 ggatgatcat tgaaaatgga ctagtggcag atagaaatgt ggacgtgttt agagcggcaa 661 tgtcggaccc gatctatcgg atacacaatg tattacaagg atatattgaa ggtatacaat 721 atggggagtt gcgtgaatca gtcaattggt tgatgaggct tggactaagg aagagaatcg 781 agtttgccaa cgatttcttg actgatttca gacgcgcaga tactatttgg ataatatcac 841 aaagattacc gattaatgct aatgtaattt ggaatgttcc aagatgccat atagcaaatc 901 taattacaaa tgtcgcgtta tgcttgccaa ccggagagta tttgatgcct aacccaagaa 961 ttaattcgat tacaatcaca cagcgtatca ctcagactaa tccattttca ataatttcag 1021 ggttaacccc gacagcggtt cagatgaatg atgttagaaa aatatatctt gcgttgatgt 1081 ttcccaacca aattattctg gatataaaac cagacagctc gcatgcggta gatccagttt 1141 tgcgaatggt cgcgggagta ttgggccatg taatgtttac ttacggaccg atcatgacaa 1201 acataactcc aacgatggct gaattgcttg acgctgcgct gagcgattat ttattgtaca 1261 tgtataacaa tcggattccg ataaactacg gcccaacagg tcaaccccta gatttccgca 1321 ttggagcaag aaatcagtat gattgtaatg ctttccgagc ggacccacaa acgggtcgag 1381 gttacaacgg gtggggggta gttgatgttc aaagagtcca gccgagtcca tatgatcatg 1441 ttcagcgtgt aatccgttac tgtgacattg attcaaggga gatcatagat ccaagaactt 1501 atggaatgaa tatgacatat ccaatatttc gggaaatgct tagaatgcta gttgctgcgg 1561 gaaaagacca agaagcagct tatttgagac agatgctgcc ctttcatatg attcgttttg 1621 cgcgaataaa tcaaattata aatgaagatt tgctcagtgc tttctccttg ccagatcaaa 1681 atttcgatgt ggttctacac aacttgatac aaggtaattt cggagaaaca gacccggtag 1741 ttttggaggt gagttgggct tcgatctggt tcgccttcgt gaggcgtttc gaacccatcg 1801 cccgttcaga tctacttgag gcggctcctc tgattgaagc tagatacgca gctgaattat 1861 ccacgatgca gatggatgta cagcagctga ggatgatgcg agctagagtt ccggacactg 1921 tgattaatgc gacgccaagt caatgctgga aagcggtttt gaagaatgcg ccagagccaa 1981 ttaaaaattt aatgaacttg tctcattctt tcagttttgt gaatgtacga gatattgtaa 2041 ggtggagtca acagagggat attcaggagt cgttagcata tgtcttgaat agggaagctt 2101 gggcgattgc taatgacttt gaagatttga tgttagtaga tcacgtgtat atacagcgta 2161 cgatgttacc tgaacctagg ttagacgata tcaacgagtt caggcggcaa gggttcttcc 2221 atacgaatat gatcgatgga gcgccaccaa ttggagatgt tactcactac acctatgcga 2281 ttgcaaatct acaggcgaat atgggacagt tcagagcagc gatcaggcgt acactggatg 2341 ataacggttg gattcagttc ggtggtatgt tgcggaatat caagattaaa ttttttgatt 2401 cgcggccgcc cgacgagata ctgacagcaa tgccttatgt gtacacagag gaggagaggg 2461 atggagtgag gatggtcgct tttaaatacg cgacaaccgc gactgcctac ttcttattgt 2521 ataacgttga gtattcaaat acgccagata ctttgatcac agtgaaccca acatttacga 2581 tgacgaagat tcatatgcgg aagaaaattg ttagacgagt tcgcgctcca gatgtgctat 2641 cacaggttaa caaacgttta gttgcgtaca aaggtaagat gcgtttaatg gatgtaacga 2701 aatgcctaaa gactggagtt caactcgcgc gaccaacgat ttagcagcct gaccacctgg 2761 tgaatcgttc tagcgggcag aattacactt ac //