LOCUS KF860038 2792 bp RNA linear VRL 23-SEP-2015 DEFINITION African horse sickness virus isolate HS 90/61 VP3 gene, complete cds. ACCESSION KF860038 VERSION KF860038.1 KEYWORDS . SOURCE African horse sickness virus ORGANISM African horse sickness virus Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus. REFERENCE 1 (bases 1 to 2792) AUTHORS Potgieter,A.C., Wright,I.M. and van Dijk,A.A. TITLE Consensus Sequence of 27 African Horse Sickness Virus Genomes from Viruses Collected over a 76-Year Period (1933 to 2009) JOURNAL Genome Announc 3 (5), e00921-15 (2015) PUBMED 26358586 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 2792) AUTHORS Potgieter,C.A., Wright,I.M., van Dijk,A.A. and Erasmus,B.J. TITLE Consensus genome sequence of the nine pathogenic OIE reference strains of African horse sickness virus and comparison of horse sickness viruses collected over a 75 year period JOURNAL Unpublished REFERENCE 3 (bases 1 to 2792) AUTHORS Potgieter,C.A., Wright,I.M., van Dijk,A.A. and Erasmus,B.J. TITLE Direct Submission JOURNAL Submitted (12-NOV-2013) Research and Development, Deltamune (Pty) Ltd, 248 Jean Avenue, Lyttelton, Centurion, Pretoria, Gauteng 0001, South Africa COMMENT ##Assembly-Data-START## Assembly Method :: Lasergene v. 8.0 Sequencing Technology :: 454 ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..2792 /mol_type="genomic RNA" /country="South Africa" /collection_date="1961" /host="Equus caballus" /db_xref="taxon:40050" /isolate="HS 90/61" /serotype="9" /organism="African horse sickness virus" CDS 27..2744 /codon_start=1 /protein_id="AHI44015.1" /translation="MQGNERIQDKNEKEKAYAPYLDGASVSTDNGPILSVFALQEIMQ KIRQNQSDMAAHAPDVDGAIPEVMTIISGIKGLLEEKDYKVINAPPNSFRTIPMQSTE YVLQVNTFYERMSEIGGPVDETDPIGFYALILEKLKFLKSEGAFILQGIATRDYRGAE IADPEIIGVSFQNALSHLAAIDRQIIQDTLNGMIIENGLVADRNVDVFRAAMSDPIYR IHNVLQGYIEGIQYGELRESVNWLMRLGLRKRIEFANDFLTDFRRADTIWIISQRLPI NANVIWNVPRCHIANLITNVALCLPTGEYLMPNPRINSITITQRITQTNPFSIISGLT PTAVQMNDVRKIYLALMFPNQIILDIKPDSSHAVDPVLRMVAGVLGHVMFTYGPIMTN ITPTMAELLDAALSDYLLYMYNNRIPINYGPTGQPLDFRIGARNQYDCNAFRADPQTG RGYNGWGVVDVQRVQPSPYDHVQRIIRYCDIDSREIIDPRTYGMNMTYPIFREMLRML VAAGKDQEAAYLRQMLPFHMIRFARINQIINEDLLSAFSLPDQNFDVVLHNLIQGNFG ETDPVVLEVSWASIWFAFVRRFEPIARSDLLEAAPLIEARYAAELSTMQMDVQQLRMM RARVPDTVINATPSQCWKAVLKNAPEPIKNLMNLSHSFSFVNVRDIVRWSQQRDIQES LAYVLNREAWAIANDFEDLMLVDHVYIQRTMLPEPRLDDINEFRRQGFFHTNMIDGAP PIGDVTHYTYAIANLQANMGQFRAAIRRTLDDNGWIQFGGMLRNIKIKFFDSRPPDEI LTAMPYVYTEEERDGVRMVAFKYATTATAYFLLYNVEYSNTPDTLITVNPTFTMTKIH MRKKIVRRVRAPDVLSQVNKRLVAYKGKMRLMDVTKCLKTGVQLARPTI" /product="VP3" ORIGIN 1 gtttattttc tgctgtgaac tccagaatgc aagggaatga aagaatacaa gataaaaatg 61 agaaggagaa agcgtatgca ccgtatctcg acggagcgag cgtatcaacg gataatgggc 121 ccattttatc agtgtttgcc ttacaggaaa tcatgcaaaa gattaggcaa aatcagagcg 181 atatggctgc acatgctccc gatgttgatg gggcgatacc agaggtaatg acgataatta 241 gtgggattaa gggattgctg gaggaaaagg attacaaagt gataaatgcg ccaccgaatt 301 cttttcggac gatcccgatg cagagtacgg agtatgtttt gcaagtgaac acgttctatg 361 agcggatgtc agaaattgga gggccggtgg atgaaacgga tcctattgga ttttatgcat 421 tgatattgga gaaattgaag tttttgaaat ccgagggggc tttcatctta caggggatag 481 ctactagaga ttataggggt gcggagattg cagatccaga gataatcggg gttagtttcc 541 aaaatgcgtt gagtcatttg gcagccatag atcgtcaaat catacaggat actctcaacg 601 ggatgatcat tgaaaatgga ctagtggcag atagaaatgt ggatgtgttt agagcggcga 661 tgtcggaccc aatctatcgg atacacaatg tattacaagg atatattgaa ggtatacaat 721 atggggaatt gcgtgaatca gtcaattggt tgatgaggct tggactaagg aagagaattg 781 agtttgccaa cgattttttg actgatttca gacgcgcaga cactatttgg ataatatcac 841 aaaggttacc aattaatgct aatgtaattt ggaatgttcc aagatgccat atagcaaatc 901 taatcacaaa tgtcgcgtta tgcttaccaa ccggagagta tttgatgccc aacccaagaa 961 ttaattcgat cacaatcacg cagcgtatca ctcagactaa tccattctca ataatttcag 1021 ggttaacccc gacagcggtt cagatgaatg atgttaggaa aatatatctt gcgttgatgt 1081 ttcccaacca aattatcctg gacataaaac cagacagctc gcatgcggta gatccagttt 1141 tgcggatggt tgcgggagta ttgggccatg taatgtttac ttacggaccg atcatgacga 1201 acataacccc gacgatggct gaattgcttg atgcagcgct gagcgactat ttgttgtata 1261 tgtataacaa tcggattccg ataaattatg gtccaacagg tcaaccccta gattttcgca 1321 ttggagcaag aaatcagtac gattgcaatg ctttccgagc ggacccacaa acgggtcgag 1381 gttacaacgg gtggggggta gttgatgttc agagagttca gccgagtcca tatgatcatg 1441 ttcagcgcat aattcgttac tgtgacattg attcaaggga gattatagat ccaagaactt 1501 atgggatgaa tatgacatat ccaatatttc gagaaatgct tagaatgcta gttgcagcgg 1561 gaaaagatca agaagcggct tatttgagac agatgttgcc ttttcatatg attcgttttg 1621 cgcgaataaa tcaaattata aatgaggatc tgctcagtgc tttctctttg ccggatcaaa 1681 atttcgatgt ggttctacac aacttaatac aaggtaattt tggagaaaca gatccggtag 1741 ttttggaggt gagttgggca tcgatctggt ttgccttcgt gaggcgtttc gaacccattg 1801 cccgttcaga tttactcgaa gcggctcctc tgattgaagc tagatatgca gctgaattat 1861 ccacgatgca gatggatgta cagcagctaa ggatgatgcg agctagagtt ccggacaccg 1921 taattaatgc gacaccaagt caatgttgga aagcggtttt gaagaatgcg ccggagccaa 1981 ttaaaaactt aatgaacttg tctcattctt tcagttttgt aaatgtacga gatattgtaa 2041 ggtggagtca acagagggac attcaggagt cgttagcgta tgtcttgaat agggaagctt 2101 gggcgatcgc taatgatttt gaagatttga tgttagtgga ccacgtgtat atccagcgta 2161 cgatgttacc tgaacctagg ttagacgata tcaacgagtt caggcggcaa gggttcttcc 2221 atacgaatat gatcgatgga gcgccaccaa ttggagatgt tactcattat acctatgcga 2281 ttgcaaatct acaggcgaat atgggacaat tcagagcggc gatcaggcgt acgctggatg 2341 ataatggttg gattcagttc ggcggtatgt tacgaaacat caagattaaa ttttttgatt 2401 cgcggccgcc cgacgagata ttgacagcaa tgccttatgt atacacagag gaggagaggg 2461 atggagtgag gatggtcgct tttaaatacg caacaaccgc gactgcctat ttcttattgt 2521 ataacgttga gtattcaaat acgccagata ctttaatcac agtaaacccc acatttacga 2581 tgacgaaaat tcatatgcgg aagaagattg tcagacgagt ccgcgctcca gatgtgctat 2641 cacaagtcaa caaacgttta gtcgcatata aaggtaaaat gcgtttaatg gatgtaacga 2701 aatgcctaaa gactggagtt caactcgcgc gaccaacgat ttagcagcct gaccacctgg 2761 tgaatcgttc tagcgggcag aattacactt ac //