LOCUS KP009771 3965 bp RNA linear VRL 23-SEP-2015 DEFINITION African horse sickness virus isolate Vryheid segment 1, complete sequence. ACCESSION KP009771 VERSION KP009771.1 KEYWORDS . SOURCE African horse sickness virus ORGANISM African horse sickness virus Viruses; dsRNA viruses; Reoviridae; Sedoreovirinae; Orbivirus. REFERENCE 1 (bases 1 to 3965) AUTHORS Potgieter,A.C., Wright,I.M. and van Dijk,A.A. TITLE Consensus Sequence of 27 African Horse Sickness Virus Genomes from Viruses Collected over a 76-Year Period (1933 to 2009) JOURNAL Genome Announc 3 (5), e00921-15 (2015) PUBMED 26358586 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 3965) AUTHORS Potgieter,C.A. and Wright,I.M. TITLE The genome sequences of the OIE reference strains of African horsesickness virus - comparison to recent and historic AHSV isolates JOURNAL Unpublished REFERENCE 3 (bases 1 to 3965) AUTHORS Potgieter,C.A. and Wright,I.M. TITLE Direct Submission JOURNAL Submitted (15-OCT-2014) Research and Development, Deltamune (Pty) Ltd, 248 Jean Avenue, Lyttelton, Centurion, Pretoria, Gauteng 0140, South Africa COMMENT GenBank Accession Numbers KP009771-KP009780 represent sequences from the 10 segments of African horse sickness virus. ##Assembly-Data-START## Assembly Method :: Lasergene v. 8.1.2 Sequencing Technology :: 454 ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..3965 /mol_type="genomic RNA" /country="South Africa" /segment="1" /collection_date="1938" /host="Equus caballus" /note="passaged in adult mice" /db_xref="taxon:40050" /isolate="Vryheid" /serotype="4" /organism="African horse sickness virus" CDS 14..3931 /codon_start=1 /protein_id="AJU57422.1" /translation="MVITVQGADLVRRALNRLFKYGRIDGTKMYYEYYRYSSKMRETR RKKGTKYKTDDEFLERERDAGRLKLYDLQVIREASWEDLLYESVHTAELDIYVRSILK LEDLEPEEEFLRNYAVCDGVHPLRDFVEMRAKNEMQIFGDMPIKAWISVLMEISRETK HKPLGLLVASDFVGRFGSPFEQNFRDLSQINEYGYCYSSPLLFEMCVTESILEFNMWY RMREERIQSLKFGLEVIDPFKLIREFFEICLPHPKKINNTLRSPYSWFVKNWGIGCPR VKVLTSIGGEDRNSKEVFYTGYHETENLYSEIVLKSKFYRESLKQNMTKTEEAISYSQ KLGNHGRTMPIFLKMLKAVYTTEFDPTKISHVILASLCLSIQTITGYGRAWVVNKSSD LEAQMKPSSDNYVQRVCDYTKNNFIKAYEEARRGGEEIVMPEDMYTSILRLAKNTSSG FSTSIDVFKRYGPNAKGGRGEKIQITSRIKALVIFTKGHEIFTPKNLALKYNTTEFFQ TKGSRDVPIKSTRIVYSINLSILVPQLIVTLPLNEYFARAGGSTLPETQRMGGKIIVG DLEATGSRVMDAADTFRNSSDPLNLTIAIDYSEFDTHLTPYNFRNGMLDGIREAMRRY QHLRYEGYTLDELIEFGYGEGRVLNTLWNGKRRVFKVAFEDYVMLSDEDKVQGVFKPP IGVKPVKNIKICEELEKKADGRDLILVSPTDGSDLAMINTHLSGENSTLIANSLHNLA IGTVIREEVKRIFGDDISFKSEQYVGDDTLFYTELRTRSVERFDSIVDTIFEVIKKSG HEASMSKTLIAPFSVEKTQTHAKQGIYVPQDRMMLVSSERRKDIEDVAGYLRSQVQTL TTKISRGFSHELAQLIFMMKSSIIGHRKLKRTIKDGGYRDRKYDDDKEDGFTLIMLRD PLIAFYPVEWNGFGAHPAAMNIIMTEDMFVDSVMRGECRAWMEPLVKLIDQSPPLWNE TSADKRMIGTDSTMSFFSRMARPAVRTVLTNSEVGDAVRSLPLGDFSPFNISKTMMHS ALLKEKNARSLLTPAYEMEYQKELQGWRPRQKKFLATSNEMEITTNYMKMFNVSKIPL HGLALKFFPDVNLSKEFFLQKSVLGNRESPRARMSYVDRIDSILRGDVVMRGFITANT IINILEKLGHTHSASDLTTLFEIMNLSSSVAQRLSEYITTERVRFDAMKLSKRGICGD EFSMSLDVCTQTMVDKYIRAPTQFTKTELDAVNLYVAQHIMLDAATGLMPSRYDINVS GDERVRLKQRVARFNTHLPKMRMVKRLIETERLSARLVQNQFV" /product="VP1" /note="RNA dependent RNA polymerase" ORIGIN 1 gtttatttga gcgatggtca tcaccgtgca aggtgcagat ctagtcagga gggctttaaa 61 tcgattattt aaatatggga ggatagatgg aactaagatg tattatgagt actatagata 121 ttcaagtaaa atgagagaga ctaggaggaa gaaaggaacg aaatataaaa cggatgatga 181 atttttagag cgcgagaggg atgcgggtag attgaagctt tacgatttac aagtgatacg 241 agaggcatcc tgggaagatt tgctgtacga gagtgttcat actgctgaat tagatatcta 301 tgttagatca atcttgaagt tagaggactt agagccggaa gaggaatttc tgcgaaatta 361 tgcagtctgt gatggtgtgc atccgttgag ggatttcgtt gagatgaggg caaaaaatga 421 aatgcagatt tttggtgata tgcccattaa agcttggatc tcagtattaa tggaaatttc 481 gcgcgaaaca aagcataaac ctcttgggtt attggtggcg tcggattttg ttggaaggtt 541 cggttcgcct tttgaacaga attttagaga tttgtcacag atcaacgaat atggttattg 601 ttactcaagt ccattattat ttgagatgtg cgtgaccgag tcaattttgg aatttaatat 661 gtggtaccga atgcgcgaag aaagaataca atcactgaaa tttggattgg aggtaattga 721 ccctttcaaa ctgatacgag aattttttga aatatgtttg ccacatccta agaagataaa 781 caacacgttg cgttcaccgt attcgtggtt cgttaaaaat tgggggatcg gatgtccgag 841 agtgaaggtt ctaacatcaa ttggaggtga ggatcgaaac tcaaaggagg ttttttatac 901 tggttatcat gaaacagaaa atctatactc agagattgtc ttgaaatcaa agttttatag 961 agaaagtcta aagcaaaata tgacaaaaac ggaagaagca attagctatt cgcaaaaact 1021 cggtaatcac gggaggacaa tgcctatttt cctgaaaatg ttaaaagcgg tatatactac 1081 agaatttgat ccaacaaaaa taagtcacgt tatattagcg tcattatgct taagcataca 1141 aacaataacg gggtacggga gggcgtgggt agttaacaag tccagcgatt tggaagcgca 1201 gatgaaacca agtagtgata actatgttca gcgtgtatgt gattatacaa agaacaactt 1261 tataaaagcc tatgaggaag cgagacgagg aggtgaagag atcgtaatgc ccgaagatat 1321 gtacacatca atattacgtc ttgctaaaaa tacaagctca ggcttttcaa ctagtattga 1381 tgtttttaag cggtatggtc ccaacgcgaa aggtggacgt ggagaaaaga tccaaataac 1441 ttcacggatt aaagcgttag tgattttcac aaaaggccac gaaatattta cgccaaaaaa 1501 tctagctttg aagtataaca ctaccgaatt tttccaaacg aaaggttcaa gagacgtccc 1561 gatcaaatca acgaggatag tgtactctat caatctttca atcttagtac cgcagctcat 1621 agtaacatta cccttgaatg agtayttcgc gagagcagga gggagtactt tgcctgaaac 1681 gcaacgtatg ggtgggaaga ttatcgttgg agatttggag gctactggat cacgtgtgat 1741 ggacgctgca gacacattta ggaattcttc agatccactc aatctaacca ttgcgattga 1801 ttacagtgaa tttgatacac atttgacacc ttataatttc agaaatggga tgctagatgg 1861 catacgggag gcgatgcgta gatatcagca tttaagatat gagggttaca cattagatga 1921 attaatagag ttcggatatg gagagggccg cgtgctgaac acattatgga atggaaaaag 1981 gcgagtattt aaagtggcat ttgaggacta tgttatgtta agtgatgagg acaaagttca 2041 gggagttttt aaaccaccta ttggagtgaa gccggtaaag aatattaaaa tttgtgaaga 2101 gctggagaaa aaggcagatg gccgtgattt aattttagtt tcacctacgg atggaagcga 2161 tctagcgatg atcaataccc atttatccgg agaaaattcc acgttgatcg caaacagctt 2221 acataacttg gcgattggga ctgttattcg tgaagaagtc aagcgcattt ttggtgatga 2281 tatttcattt aaatcagagc agtacgtcgg tgatgacact ttattctata ctgaattgag 2341 gacgcgatca gtcgaacggt ttgattcaat tgtggatacg atttttgaag ttattaagaa 2401 gagtggtcac gaagcctcaa tgtcaaaaac tctcatagct cccttttcag tcgaaaagac 2461 acaaacgcac gccaagcagg gaatatatgt tccgcaggat cggatgatgc tagtttcgtc 2521 tgaacgaaga aaggatattg aggatgttgc tgggtacctg agatctcaag ttcaaacatt 2581 gacaacgaaa atcagtcgtg gtttctcgca tgaactggcg cagctcattt ttatgatgaa 2641 atcttcgatt atcgggcata gaaagctgaa gagaacgatt aaggatggag ggtacagaga 2701 tagaaaatac gatgatgaca aggaggatgg ctttacttta ataatgttgc gagatccgct 2761 tattgctttt tatcccgttg aatggaatgg ttttggagcg cacccggcgg cgatgaatat 2821 aataatgact gaagatatgt tcgtggattc ggtgatgaga ggggaatgta gagcgtggat 2881 ggaaccttta gttaagttaa ttgatcaatc tccgcctctg tggaatgaaa cgagcgcgga 2941 taaaaggatg attggwacgg atagtacgat gtcttttttc tctagaatgg caaggccagc 3001 ggttcggaca gtgttaacga attctgaggt tggagatgct gtaagaagtt tgcctctggg 3061 agatttctct ccttttaata tctctaagac tatgatgcat tcggcgctgt taaaagaaaa 3121 gaatgcccgt tcactactca ccccggcrta tgagatggaa tatcaaaaag agttgcaagg 3181 ttggagacca agacagaaga agtttttagc gacgtccaac gaaatggaaa tcaccacgaa 3241 ttacatgaaa atgtttaacg tcagtaaaat cccactgcac ggtttggcgt tgaagttttt 3301 cccagatgtt aacttgtcga aggaattttt cttacagaag agcgttttgg gcaatagaga 3361 aagtccgaga gcgcgaatgt catacgttga taggattgac tcaatattac gcggcgatgt 3421 tgtaatgcga gggtttatta ccgcgaatac tatcatcaac atattggaga aattgggaca 3481 cacgcactcg gcgagcgact tgactacgct attcgaaata atgaacttat catcaagcgt 3541 cgctcagcgg ctatcagagt atatcacgac tgaacgcgtw cgcttcgatg cgatgaaact 3601 ttcaaagagg ggcatatgtg gtgaygagtt ctcaatgtca ttggatgttt gcacgcaaac 3661 gatggtggat aaatatatac gtgcgccgac acagtttact aaaacagagc tcgacgccgt 3721 aaatctgtat gttgcccaac atattatgtt agacgcagcg acggggttga tgccatcgcg 3781 atatgatatt aatgtatcgg gagacgaaag ggtacgactt aaacagcgtg ttgcccgatt 3841 taacacacac ctaccaaaga tgcgaatggt caaaagattg atcgaaacgg agaggttgtc 3901 cgcgagattg gttcagaacc agtttgtctg attagaacta gcacccctca gctcaaaaca 3961 cttac //