LOCUS       LN713499                1366 bp    DNA     circular VRL 02-DEC-2016
DEFINITION  Ageratum conyzoides associated symptomless alphasatellite complete
            sequence, isolate RM131.
ACCESSION   LN713499
VERSION     LN713499.1
KEYWORDS    .
SOURCE      Ageratum conyzoides associated symptomless alphasatellite
  ORGANISM  Ageratum conyzoides associated symptomless alphasatellite
            Viruses; Satellites; Satellite Nucleic Acids; Single stranded DNA
            satellites; Alphasatellites; Begomovirus-associated
            alphasatellites; unclassified Begomovirus-associated
            alphasatellites.
REFERENCE   1
  AUTHORS   Mustafa,R.
  TITLE     Characterization of Begomovirus and their associated satellites
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1366)
  AUTHORS   Mustafa,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (01-DEC-2014) Agricultural Biotechnology Division,
            NIBGE, NIBGE jhangh road faislabad, 577, PAKISTAN
FEATURES             Location/Qualifiers
     source          1..1366
                     /mol_type="genomic DNA"
                     /country="Pakistan:Sindh"
                     /isolation_source="plant leaf"
                     /host="Gossypium hirsutum"
                     /PCR_primers="fwd_name: DNA101, fwd_seq:
                     ctgcagataatgtagcttaccag, rev_name: DNA1 02, rev_seq:
                     ctgcagatcctccacgtgtatag"
                     /db_xref="taxon:944995"
                     /isolate="RM131"
                     /lat_lon="27.9511 N 69.2397 E"
                     /organism="Ageratum conyzoides associated symptomless
                     alphasatellite"
     gene            82..1029
                     /gene="Rep"
     CDS             82..1029
                     /codon_start=1
                     /protein_id="CEK41197.1"
                     /gene="Rep"
                     /translation="MPALKAQWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPT
                     TKRRHLQGYLQLKGQRTLNQVKAIFGDLKPHLEKQRARKTDDARDYCMKPETRVSGPF
                     EFGEYCPAGSHKRRQRELVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSAPEIQISNL
                     KSWQSRLKTLLERDPDDRTIFWVYGPDGGEGKSTFARDLYRSGSWFYTRGGSADNVAY
                     QYIGCLGNNIVFDIPRDKKDYLQYSLIEMFKDRLIVSNKYEPLMAPLINCIHVVVMSN
                     FLPDFEKISVDRVHVIPCRPCGVCLKHHNINDNCEDYID"
                     /product="Replication initiator protein"
ORIGIN      
        1 accccgcctc gagaccccga gctagagacc tgtccgtacg tttctccctt ctctcttata
       61 ttatttgctg tttgagtaaa catgcctgcc ctcaaagctc aatggtggtg tttcacggtg
      121 ttcttcctct ctgctactgc acctgatttg gtgcctctgt tcgagaacac tcacgtgagt
      181 tatgcttgtt ggcaagaaga ggagtctccg acgacgaaac gacgccacct gcaaggctac
      241 ctgcaattga agggtcaaag gaccctgaac caggtgaagg ccatatttgg ggatttgaag
      301 ccccatcttg agaaacagcg agctcgtaag acagacgatg ctcgcgatta ctgtatgaaa
      361 cccgaaacta gggtttctgg cccctttgaa tttggggaat actgtcctgc tggttcacac
      421 aaacgacgac aaagggaact cgtaattcga tctccggtga gaatggcaga agaaaatccg
      481 tccgtcttcc gacgagtaaa ggcaaagatt gctgaggaag aattccagaa gagcgcgcct
      541 gagattcaaa tttcaaattt gaaatcttgg caatcgcgcc taaagacgct cttggagagg
      601 gacccagatg accgcactat cttctgggtt tacggacctg atggtgggga aggaaaatcc
      661 accttcgcca gagacctgta tagaagtggg tcctggttct atacacgtgg aggatctgca
      721 gataatgtag cttaccagta cataggatgt ttaggaaata atattgtatt tgatatccct
      781 cgtgataaaa aggattatct gcaatatagt ttaatagaga tgtttaagga taggttaata
      841 gttagtaata agtatgagcc tcttatggcc cctttaatta attgtattca tgtagtagtt
      901 atgtctaatt ttctcccaga ctttgagaag attagtgtgg atagagttca tgtaatccca
      961 tgtagaccat gtggtgtttg tcttaaacac cacaatatta atgataattg tgaggattat
     1021 attgactaaa caattttgtt tcttgaaaac aagaaagaat gaaatgaaaa aagaaaaaag
     1081 aaaaacgtga gccttctatt agtttaagaa agaaagtgcc gcgcagcggc attcaaaaaa
     1141 aaaatataaa tagaaaagaa aaataaattg tcttattaaa acgacgacgt attgaataaa
     1201 gtgatttggg actaaaacgt aaatattgta aacttgcgtg cttgcgctat aaatatttaa
     1261 tatttacggt taagcggagt aaatatagaa gtcttcaggg gtatgcgctt gcaattattg
     1321 aggtctctca gctataaata acacgtcacg aggcgggtgt agtatt
//