LOCUS NC_003434 2746 bp DNA circular VRL 04-FEB-2011 DEFINITION Ageratum enation virus, complete genome. ACCESSION NC_003434 VERSION NC_003434.1 DBSOURCE BioProject accession PRJNA15192 KEYWORDS RefSeq; C2 gene; C3 gene; C4 gene; coat protein; coat protein gene; complete genome; Rep gene; replication associated protein; V1 gene. SOURCE Ageratum enation virus ORGANISM Ageratum enation virus Viruses; ssDNA viruses; Geminiviridae; Begomovirus. REFERENCE 1 AUTHORS Briddon,R.W., Bull,S.E. and Markham,P.G. TITLE Monopartite begomoviruses associated with DNA beta JOURNAL Unpublished REFERENCE 2 (bases 1 to 2746) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (12-MAR-2002) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 2746) AUTHORS Briddon,R.W. TITLE Direct Submission JOURNAL Submitted (28-FEB-2002) Briddon R.W., Disease and Stress Biology, John Innes Centre, Colney Lane, Norwich, Norfolk, NR4 7UH, UNITED KINGDOM COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. The reference sequence is identical to AJ437618. COMPLETENESS: full length. FEATURES Location/Qualifiers source 1..2746 /mol_type="genomic DNA" /country="Nepal" /tissue_type="leaf" /host="Ageratum conyzoides" /db_xref="taxon:188333" /clone="SB30-3" /organism="Ageratum enation virus" gene 133..480 /locus_tag="AgEVgp1" /db_xref="GeneID:935167" /gene="V1" CDS 133..480 /locus_tag="AgEVgp1" /protein_id="NP_598186.1" /gene="V1" /db_xref="InterPro:IPR002511" /db_xref="InterPro:IPR005159" /db_xref="UniProtKB/TrEMBL:Q8QVH4" /db_xref="GeneID:935167" /codon_start=1 /product="V1 protein" /translation="MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYSPDTLGHDLIRD LISVIRARNYVEATSRYNHFHARFEGTPTSQLRQPICEPCCCPHCPRHQSKSMGEQAH EQKTQDVQDVQKS" gene 293..1063 /locus_tag="AgEVgp2" /db_xref="GeneID:935165" /gene="coat protein" CDS 293..1063 /locus_tag="AgEVgp2" /function="involved in encapsidation and virus transmission by insect" /protein_id="NP_598187.1" /gene="coat protein" /db_xref="GOA:Q8QVH3" /db_xref="InterPro:IPR000263" /db_xref="InterPro:IPR000650" /db_xref="UniProtKB/TrEMBL:Q8QVH3" /db_xref="GeneID:935165" /codon_start=1 /translation="MSKRPADIIISTPASKGRRRLNFDSPYVSRAAAPIVRVTKARAW ANRPMNRKPRMYRMYRSPDVPRGCEGPCKGQSFESRHDIQHIGKVMCVSDVTRGTGLT HRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFD NEPSTATVKNVHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGK YENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN" /product="coat protein" gene complement(1060..1464) /locus_tag="AgEVgp3" /db_xref="GeneID:935162" /gene="C3" CDS complement(1060..1464) /locus_tag="AgEVgp3" /protein_id="NP_598188.1" /gene="C3" /db_xref="InterPro:IPR000657" /db_xref="UniProtKB/TrEMBL:Q8QVH2" /db_xref="GeneID:935162" /codon_start=1 /product="C3 protein" /translation="MDSRTAELIKASQAENGVFIWEIQNPLYFKITEHNNRPFLMKED IITVQIQFNYNLRKALEIHKCFLAYRIWMTSQPPTGQFLRVFKTQVLKYLNNLGIISI NNVIRAVDHVLWDVLEHIVYVDQSYSIKFNIY" gene complement(1205..1609) /locus_tag="AgEVgp4" /db_xref="GeneID:935166" /gene="C2" CDS complement(1205..1609) /locus_tag="AgEVgp4" /protein_id="NP_598189.1" /gene="C2" /db_xref="GOA:Q8QVH1" /db_xref="InterPro:IPR000942" /db_xref="UniProtKB/TrEMBL:Q8QVH1" /db_xref="GeneID:935166" /codon_start=1 /product="C2 protein" /translation="MRSSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIAL ACHNHGFTHSGTHQSFSSREWRVYLGDSKSPVFQDNRTQQPAISYERGHHHRPNTVQL QPEESVGDTQVFSSLPNLDDFTASDWAILKGL" gene complement(1512..2597) /locus_tag="AgEVgp5" /db_xref="GeneID:935164" /gene="Rep" CDS complement(1512..2597) /locus_tag="AgEVgp5" /protein_id="NP_598190.1" /gene="Rep" /db_xref="GOA:Q8QVH0" /db_xref="HSSP:1L5I" /db_xref="InterPro:IPR001191" /db_xref="InterPro:IPR001301" /db_xref="InterPro:IPR022690" /db_xref="InterPro:IPR022692" /db_xref="UniProtKB/TrEMBL:Q8QVH0" /db_xref="GeneID:935164" /codon_start=1 /product="replication associated protein" /translation="MAAPNRLKINAKNYFLTYPKCSLTKEEALSQLLNLQPPTNKKYI KICRELHEDGSPHLHVLIQFEGKYQCKNQRFFDLVSPNRSAHFHPNIQGAKSSTDVKS YIDKDGDTLEWGEFQIDGRSARGGQQTANDAAAEALNAGSKEAAMAIIKEKLPEKFIF QYHNLNSNLDRIFTPPLEVYVSPFLSSSFDQVPEELEEWVSENVMNAAARPLRPQSIV IEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNIIDDVDPHYLKHFKEFMG AQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNNALKNWALKNAIFV TLEGPLYSGSNQSAAQASQEGDEASTC" gene complement(2183..2440) /locus_tag="AgEVgp6" /db_xref="GeneID:935163" /gene="C4" CDS complement(2183..2440) /locus_tag="AgEVgp6" /protein_id="NP_598191.1" /gene="C4" /db_xref="InterPro:IPR002488" /db_xref="UniProtKB/TrEMBL:Q8QVG9" /db_xref="GeneID:935163" /codon_start=1 /product="C4 protein" /translation="MGALISMCSSSSKGNISARINDSSTWSPQTGQHISIRTFRELNP APTSSPTSTRTETPSNGESSRSMGDLHEEVNRQLMMLLQKP" ORIGIN 1 accggatggc cgcgaatttt ttgtggcccc cgcaacgcat ttacatgtgg accaatgaaa 61 ttggctcctc gtggcttaat tgttttgtgg tcccctattt aaacttgctc accaagtagt 121 gcgctccgca ctatgtggga tccattagta aacgagtttc ccgaaaccgt tcacggtttt 181 agatgtatgt tagcagttaa atatctgcag ttagtagaga agacttattc gcctgacaca 241 ttagggcacg atttaattag ggatttaatt tcagttatta gggctagaaa ttatgtcgaa 301 gcgaccagca gatataatca tttccacgcc cgcttcgaag ggacgccgac gtctcaactt 361 cgacagccca tatgtgagcc gtgctgctgc ccccattgtc cgcgtcacca aagcaagagc 421 atgggcgaac aggcccatga acagaaaacc caggatgtac aggatgtaca gaagtcctga 481 tgtccctaga ggatgtgaag gtccatgtaa gggccagtct tttgagtcta gacatgacat 541 tcagcatata ggtaaagtta tgtgtgtcag tgatgttacg cgtggaactg ggctgactca 601 tcgagtgggt aaaaggtttt gtgttaaatc cgtttatgtc ttgggtaaga tctggatgga 661 tgaaaatatt aagaccaaga accacactaa cagtgttatg ttttttttag ttagggatcg 721 taggcctgtc gataaacctc aagattttgg agaggttttt aacatgtttg ataatgagcc 781 cagtacggct actgtgaaga atgttcatcg tgataggtat caagtgcttc ggaaatggca 841 tgcaactgtt acgggtggac aatatgcgtc aaaggaacaa gctcttgtga agaagtttgt 901 tagggttaat aattatgttg tgtataatca gcaagaagct ggcaagtatg agaatcattc 961 tgagaatgcg ttaatgttgt atatggcatg tactcatgcc tctaacccag tgtatgctac 1021 tttgaagata cggatctatt tctatgattc tgtaacaaat taataaatat tgaattttat 1081 tgaataagat tggtctacat atacaatgtg ttctaataca tcccataata catgatcaac 1141 tgcacgaatt acattattaa tactgataat tcctaaatta tttaaatatt taagcacttg 1201 ggtcttaaag acccttaaga attgcccagt cggaggctgt gaagtcatcc agattcggta 1261 ggctagaaaa cacttgtgta tctccaacgc tttcctcagg ttgtaattga actgtatttg 1321 gacggtgatg atgtcctctt tcataagaaa tggccggttg ttgtgttctg ttatcttgaa 1381 atacagggga ttttgaatct cccagataaa cacgccattc tctgcttgag aagctttgat 1441 gagttccgct gtgcgtgaat ccatggttgt ggcaggctaa tgctatgaag tatgaacacc 1501 cacaagggag atcaacacgt cgacgcctcg tccccttctt ggctagcctg tgctgcactt 1561 tgattggaac ctgagtagag tgggccttcg agggtgacga agatcgcatt ctttaaagcc 1621 caatttttga gagcattatt cttctcttca tccaagaact ctttataact tgaattaggt 1681 cctggattgc agaggaagat agtgggaatt ccgcctttaa tttgaactgg ctttccgtac 1741 ttggtatttg attgccagtc cctttgggcc cccatgaatt ccttaaagtg ctttaggtag 1801 tgaggatcta cgtcatcgat gatgttatac cacgcatcat tgctgtaaac tttggggctt 1861 agatctaaat gaccgcatag gtaattatga ggccctaatg acctagccca catcgtttta 1921 cccgtacgac tgtctccctc aattactata ctttgaggcc tcagaggccg cgcagcggca 1981 ttcatgacat tttctgagac ccattcttca agttcttcag gaacttgatc aaaagaagaa 2041 gataaaaaag gcgaaacata aacctccaac ggaggagtaa aaatcctatc taaattagaa 2101 tttaaattat gatattgaaa aataaatttt tctgggagtt tctcctttat tatagccatt 2161 gcagcttctt tagaacctgc atttagggct tctgcagcag catcattagc tgtctgttga 2221 cctcctcgtg cagatctccc atcgatctgg aactctcccc attcgagggt gtctccgtcc 2281 ttgtcgatgt aggacttgac gtcggtgctg gatttagctc cctgaatgtt cggatggaaa 2341 tgtgctgacc tgtttgggga gaccaggtcg aagaatcgtt gattcttgca ctgatatttc 2401 ccttcgaact ggatgagcac atggagatga gggctcccat cttcgtgtag ttctctgcag 2461 atcttgatgt attttttgtt tgttgggggt tggagattta ataattggga aagtgcctct 2521 tctttagtaa gggagcactt gggataagtg agaaaataat ttttggcatt tatttttaac 2581 cgattcgggg ctgccatgtt gacttagtca atcggtgtct ctcaaccttc tctatgtatc 2641 ggtgtatcgg agtcctatat atatggagac tccaatggca taattgtaat aacaaaactt 2701 taatttgaaa tccttaacgc tccaaagcgg ccatccgtat aatatt //