LOCUS       NC_033271               1370 bp    DNA     circular VRL 17-JAN-2017
DEFINITION  Ageratum yellow vein Pakistan alphasatellite alpha Rep gene,
            isolate H5A1.
ACCESSION   NC_033271
VERSION     NC_033271.1
DBSOURCE    BioProject accession PRJNA361920
KEYWORDS    RefSeq; complete genome.
SOURCE      Ageratum yellow vein Pakistan alphasatellite
  ORGANISM  Ageratum yellow vein Pakistan alphasatellite
            Viruses; Satellites; Satellite Nucleic Acids; Single stranded DNA
            satellites; Alphasatellites; Begomovirus-associated
            alphasatellites; unclassified Begomovirus-associated
            alphasatellites.
REFERENCE   1
  AUTHORS   Abbas,Q. and Briddon,R.W.
  TITLE     Diversity of alphasatellites associated with CLCuD in Pakistan
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1370)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (17-JAN-2017) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1370)
  AUTHORS   Abbas,Q.
  TITLE     Direct Submission
  JOURNAL   Submitted (13-FEB-2014) Abbas Q., ABD, Nibge, Nibge Jhang road
            Faisalabad, 38000, PAKISTAN
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence is identical to HG934822.
            COMPLETENESS: full length.
FEATURES             Location/Qualifiers
     source          1..1370
                     /mol_type="genomic DNA"
                     /country="Pakistan:Dharam Kot"
                     /tissue_type="Leaf tissue"
                     /collected_by="Zafar Iqbal"
                     /collection_date="2013"
                     /host="Okra"
                     /PCR_primers="fwd_name: DNA1 01, fwd_seq:
                     ctgcagataatgtagcttaccag, rev_name: DNA102, rev_seq:
                     ctgcagatcctccacgtgtatag"
                     /db_xref="taxon:1468596"
                     /isolate="H5A1"
                     /lat_lon="31.31 N 72.8 E"
                     /organism="Ageratum yellow vein Pakistan alphasatellite"
     gene            80..1027
                     /locus_tag="BWU76_gp1"
                     /db_xref="GeneID:30855482"
                     /gene="alpha Rep"
     CDS             80..1027
                     /locus_tag="BWU76_gp1"
                     /protein_id="YP_009337826.1"
                     /gene="alpha Rep"
                     /db_xref="GeneID:30855482"
                     /codon_start=1
                     /product="Alpha Rep protein"
                     /translation="MPALKAQWWCFTVFFLSATAPDLVPLFENTHVSYACWQEEESPT
                     TRRRHLQGYLQLKGQRTLNQVKALFGDLKPHLEKQRARRTDEARDYCMKLETRVSGPF
                     EFGDYCPSGSHRRRQREAVIRSPVRMAEENPSVFRRVKAKIAEEEFQKSAPEIQISNF
                     KSWQSRLKTLLERDPDDRTIFWVYGPDGGEGKSTFARDLYRSGSWFYTRGGSADNVAY
                     QYIGCLGNNIVFDIPRDKKDYLQYSLIEMFKDRLVVSNKYEPLMAPLLKCIHVVVMSN
                     FLPDFEKISVDRVHVIPCRPCGVCLKHHNIDNKCEDYID"
ORIGIN      
        1 accccgcctc gagaccccga gctagagacc tgtccgtaca ttttttcttt tttcttatat
       61 tttagctgtc tgagtaaaca tgcctgccct caaagctcaa tggtggtgct ttacggtttt
      121 cttcctgtcc gctacggctc ctgatttggt gcccctgttt gaaaacactc acgttagcta
      181 cgcttgctgg caagaggaag agtctcccac gactcgacgt cgccatttgc aaggctactt
      241 gcaactgaag ggtcagagga ccctgaacca ggtgaaagcc ctctttgggg atttgaagcc
      301 ccatcttgag aagcagcgag ctcgccgtac tgacgaagct cgcgattact gtatgaaatt
      361 ggaaactagg gtttctggtc ctttcgaatt tggggattat tgtcctagtg ggtcccacag
      421 acgccgacaa cgagaagctg taattcgatc tccggtgaga atggctgagg aaaatccgtc
      481 tgtcttccga cgagtcaagg caaagattgc tgaggaagaa ttccagaaga gcgcgcctga
      541 gattcaaatt tcgaatttca aatcttggca atcgcgccta aagacgctcc tggagaggga
      601 cccagatgac cgcactatct tctgggttta cggacctgat ggtggggaag gaaaatccac
      661 ttttgccaga gacctgtata gaagtgggtc ctggttctat acacgtggag gatctgcaga
      721 taatgtagct taccagtaca taggatgttt aggaaataat attgtatttg atatccctcg
      781 tgataagaag gattatttac aatatagttt aattgagatg tttaaggata gattagtagt
      841 tagtaataag tatgagccgc ttatggcccc tctacttaag tgtattcatg ttgtagttat
      901 gtctaatttt ctcccagact tcgagaagat tagcgtagat agagtccatg taatcccatg
      961 tagaccatgt ggtgtttgtc ttaaacacca taatattgat aataaatgtg aggattatat
     1021 tgattgaata attttgtttc ttgaaaacaa gaaagaatga aatgaaaaaa aaaaaaataa
     1081 acgagaaaac atgagcctta tattatttca tgagaaaaca gggccgcgca gcggcccaat
     1141 tgaacaaaat taagatgaaa ataaaaaaaa tgggcttaca aaaacgacta cgtattgaaa
     1201 aagtgtaaat aggaccaaaa tataattata ttaaacttga gtgctcgcca acaaaagtaa
     1261 atgaaagata cggttaagcg gagtaaactt tatgatactt caggggtatg cgttgcaatt
     1321 aataaggtct ctctgctata aataacacgt cacgaggcgg gtgtagtatt
//