LOCUS DQ028632 8266 bp RNA linear VRL 25-MAY-2006 DEFINITION Aichi virus isolate Goiania/GO/03/01/Brazil, complete genome. ACCESSION DQ028632 VERSION DQ028632.1 KEYWORDS . SOURCE Aichi virus 1 ORGANISM Aichi virus 1 Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; Picornaviridae; Kobuvirus. REFERENCE 1 (bases 1 to 8266) AUTHORS Oh,D.Y., Silva,P.A., Hauroeder,B., Diedrich,S., Cardoso,D.D. and Schreier,E. TITLE Molecular characterization of the first Aichi viruses isolated in Europe and in South America JOURNAL Arch. Virol. 151 (6), 1199-1206 (2006) PUBMED 16421634 REFERENCE 2 (bases 1 to 8266) AUTHORS Silva,P.A., Cardoso,D.D.P. and Schreier,E. TITLE Direct Submission JOURNAL Submitted (04-MAY-2005) Molecular Epidemiology of Viral Pathogens, Robert Koch Institute, Nordufer 20, Berlin 13353, Germany FEATURES Location/Qualifiers source 1..8266 /mol_type="genomic RNA" /db_xref="taxon:1313215" /country="Brazil" /isolation_source="stool" /isolate="Goiania/GO/03/01/Brazil" /organism="Aichi virus 1" CDS 728..8029 /codon_start=1 /protein_id="AAY46271.1" /translation="MAATRVSRSVLAAVAHSAAHRTYHTVLDCYDRLYLSTNPHLSYP LPKNSSFPCPFCQYDEQNEVLSPESLCGEGAEPCWKCSQDKPRRKHNTVPPEEWLYDS DVQSWFYPETYYSDLQQKFFDKLALLSLPGAYQAKTPEERALADALAQLLNFPSTPRL SIPTANLQRQGNSVTNIYGNGNNVTTDVGANGWAPTVSTGLGDGPVSASADSLPGRSG GASSEKTHTVSGSSNKVGSRFSKWWEPAAARALERATDSAIDGIDAAGKAASKAITRK LDRPAAPSSTTHPQPSLIALNPSATQSDNASILTGSTAPSFLAYPTATPVPLPNPDEP SQPGPSGDRTWLLDTVTWSQEFTRGWNIAGPNGMQWNGLENPLFPVSTDTNWTSSTNP STAYPLPFSFVRAYPDSPWAAMYNTHSMWNCGWRVQVTVNGSQFHAGALILYMVPEAT TESIQTARNNAGFVFPYVILNLYESNTATIEVPYISPTPNTSSGLHAPWTFYLQVLSP LNPPPSLPTSLSCSIYVTPVDSSFHGLRYLATQHWKTRAVPGAGTFGSAVAGQELPLC GVRAYYPPNSYIPAQVRDWLEFAHRPGLMATVPWTMADEPAERLGIFPVSPSAIAGTG APISYVISLFSQWRGELAAHLLFTGSAQHYGRPVVCYTPAAPQPPTTMQEAMRGTYTV WDVNAASTLEFTIPFISNSYWKTVDVNNPDALLSTTGYVSIWVQNPLVGPHTAPASAL VQAFISAGESFNVRLMQNPALTSQTLTEDLDAPQDTGNIENGAADNTPQPRTTFDYTE NPLPPDTKLENFFSFYRLLPMGNNGAPSLSFPANEGTVIPLNPINWLQGADVSGIASM LSCFTYIAADLRITLRFANPNDNPATMLVAFAPPGATIPLHPTRQMLSNFYMAEVPVS AATSTMVSFSIPYTSPLSAIPTSYFGWEDWSGTNFGQLSSGSWGNLMLIPSLAVDSAI PFDFQLSCWVAFGNFKAWVPRPPPPLPPLPTPATNAERTVAVIKQGAATATPDVNPDD RVYIVRAQRPTYVHWAIRKVSPDGSAQQISLSRSGIRALVALEPPEGELHLEVLPSHW TLAELQLGNEWEYSATNNCTHFVSSITGEPLPNTGFSLALGIGALTAIAASAAVAVKA LKGIRRQGLLTLSADTETNQTLNKITESVNQAAQVVSQFDLSGPANSVSLAASDIREA AHKVASSLNGFTDVIADIKDSLFTRVSDAVETGVATFLTWLVKLFGYLLVLFGSPTPI SISGLLVIICADLAPHAREFFTASENVLSSLYYWIATKLGLSVTPQECERVTLEPQGL KDFNDGALAMRNVEWIGETAWKWAHRLLDWIRGKAKTDPQAKLADVHDEIMLHYSDSI LALGSEKLPIEHITQSISRCRELVSIAQEAKSGPHSSFLNQSIKNYTLAISQHRKRQT GPRPEPVVVYLYGPPGTGKSLLASLLAQTLSQRLSGTPDDVYSPSSASCEYFDGYTGQ AVHFIDDIGQDPEGRDWANFPNLVSSAPFIVPMASLEEKGTHYTSKVIVVTSNFHEPN ERAARSMGALRRRVHLRINVTSNGVPFDPTNALNPIPGTQSKYFTAQTPLTLFQSNTV RLDRDSIWTPSFSNMDELVDAIVTRLDRSTGVSNSLASLIKRQGNRVIDAEPREIPLE YADDLLEAMAHHRPVPCSLGLSQAIANNTPLQQISDTFWKYRKPIFTCTTFLAVLGFL CSVIPLARSLWKSRQDTPQETQAAYSAIPHQKPKPKSQKPVPTRHIQRQGISPAVPGI SNNVVHVESGNGLSKNVMSGFYIFSRFLLVPTHLREPHHTTLMVGTDTYDWATLQTQE FGEITIVHTPTSRQYKDMRRFIGAHPHPTGLLVSQFKAAPLYVRISDNRILDLDFPGV VVCKQAYGYRAATFEGLCGSPLVTDDPSGVKILGLHVAGVAGTSGFSAPIHPILSQIT QFATTQQSLIVPTAEVRPGVNVNRMSRLHPSPAYGAFPIKKQPAPLKRNDRRLQEGVD LDTQLFLKHGKGDVTEPWPGLEAAADLYFSTFPSSLPVLTQEQAIHGTPNMEGLDMGQ AAGYPWNTLGRSRRSLFNETEPGVFVPKPELQAEINQTLEDPDYVYSTFLKDELRPTA KVEQGLTRIVEAAPIHAIVAGRMLLGGLIDYMQGRPGEHGSAVGCNPDVHWTSFFYAF SEFSQVYDLDYKCFDATLPSAVFTLVAKHLTRITGDPRVGRYIHSIRHSHHIYGNHMY DMIGGNPSGCVATSILNTIINNICVLSALIQHPDFSPSRFHILAYGDDVIYATEPPIH PSFLREFYQKHTPLVVTPANKGQDFPPTSTIYEVTFLKRWFVPDDVRPIYIHPVMDPD TYEQSVMWLRDGDFQDVVTSLCHLAFHSGPKTYAAWCTQVREQCLKSGFAPNFLPYSY LQLRWLNLLAA" /product="polyprotein" ORIGIN 1 ggcttcggcc ccctcaccct cttttccggt ggtctggtcc cggaccaccg ttactccatt 61 cagcttcttc ggaacctgtt cggaggaatt aaacgggcac ccatacaccc ccatcccctt 121 ttttgcaact taagtatgtg tgctcgtaat cttgactccc acggaatgga tcgatccgct 181 ggagaacaaa ctgctagatc cacatcctcc ctcccccctg ggaggacctc ggtcctccca 241 catcctcccc ccagcctgac gtatcacagg ctgtgtgaag cccccgcgaa agctgctcac 301 gtggcaattg tgggtccccc cttcatcaag acaccaggtc tttcctcctt aaggctagtc 361 ccgatgtgtg aattcacatc gggcaactag tggtgtcact gtgcgctccc aatctcggcc 421 gcggagtgct gttccccaag ccaaacccct ggcccttcac tatgtgcctg gcaagcatat 481 ctgagaaggc gttccgctgt ggctgccagc ctggtaacag gtgccccagt gtgcgtaacc 541 ttcttccgtc cccggacggt agtgattggt taagacttgg cgtaaggttc atgtgccaac 601 gccctgtgcg ggatgaaacc tctactgccc taggaatgcc aggcaggtac cccaccttcg 661 ggtgggatct gagcctgggc taattgtcta cgggtagttt catttctaat tctttcatgt 721 cggagtcatg gctgcaacac gggtttcacg atctgtgctc gctgctgtgg ctcactccgc 781 tgctcaccgc acctaccaca ctgtccttga ctgctatgat aggctctatc tctccaccaa 841 tccccacctc tcataccccc tccccaaaaa ctcctccttc ccctgtccct tctgccagta 901 cgacgagcag aacgaagtcc tctccccaga gtctctctgt ggtgaggggg ccgaaccctg 961 ctggaagtgc tcgcaggaca aaccccgccg caaacacaac actgtccctc ctgaagaatg 1021 gctctatgat tctgatgtcc aatcctggtt ctatcctgaa acatactatt ctgacctcca 1081 acaaaagttc tttgacaaat tggctcttct ctccctccca ggtgcctacc aagcaaagac 1141 cccggaggag cgtgccctcg ctgacgcgct cgctcaactt ctcaatttcc cctccacacc 1201 ccgactctcc attcccaccg ccaatctcca acggcaaggc aattcggtca ccaacatcta 1261 cggcaatggc aacaacgtca ccactgacgt tggcgccaac ggttgggccc ccacggtctc 1321 aactggtcta ggtgatggtc ccgtttccgc ctctgccgac tccctccccg ggcgatccgg 1381 aggtgcttcc tccgagaaaa cccacaccgt ctccggctct tccaacaaag tcggatcccg 1441 cttctccaag tggtgggaac cagccgccgc gcgtgctctg gagcgcgcca ccgactcagc 1501 catcgacgga atcgatgctg ccgggaaggc cgcctccaaa gcgatcacgc gaaagctgga 1561 ccgtcccgct gctccctcct ccaccaccca cccccaaccc tccctcatcg ctctcaaccc 1621 atctgccacc caatccgata acgcctccat ccttaccgga tccaccgccc cctcattcct 1681 cgcttaccct accgccaccc ctgtccccct tccaaatccg gacgaaccct cccagcctgg 1741 cccatctggc gaccgcacct ggttgctgga cacagttacc tggtcacagg agttcacccg 1801 gggctggaat attgcaggcc ccaatggcat gcagtggaac ggcctggaaa accccctctt 1861 tcccgtctcc acagacacca actggacctc ctccacaaac ccttccaccg cttaccctct 1921 acccttctcc ttcgtgcgtg cgtacccgga ttccccctgg gctgccatgt acaacaccca 1981 ctccatgtgg aactgcggtt ggcgcgtcca agtgaccgtc aacggctcac aattccacgc 2041 tggagccctc atcctctaca tggtcccaga agccaccacc gagtcgatcc aaacggcccg 2101 aaacaacgct ggcttcgtct tcccctacgt catcctcaac ctctatgaga gcaacactgc 2161 taccatagag gtcccctaca tctcacccac tcccaacacc tctagtggac tccacgcccc 2221 gtggacgttc tacctccagg tcctctcccc cctgaacccc cctccctcac tccccacttc 2281 tctgtcctgc tccatctacg tcacacctgt tgactcctcc ttccacggtc tccgttacct 2341 ggctacacag cactggaaga cccgcgccgt ccccggtgcg ggtactttcg gctcagctgt 2401 cgctggccag gaactcccac tctgcggagt ccgggcttat tacccaccga actcctacat 2461 cccagcccaa gtccgcgatt ggttggaatt cgcccaccgt cccggtctca tggccaccgt 2521 gccgtggacc atggcggacg aaccagctga acgccttggc atctttcctg tctctcccag 2581 tgccattgct ggtactggag cccccatctc ctacgtcatc tccctcttct cccagtggcg 2641 cggtgaactc gccgcccacc tcctcttcac tggctctgca cagcattacg gccgtccggt 2701 cgtgtgctac acccccgctg ccccccagcc acccaccacc atgcaggagg caatgcgcgg 2761 aacatacaca gtatgggacg tcaatgccgc ctcaaccctc gaattcacca tccccttcat 2821 ctccaactcc tactggaaga cggtggacgt caacaaccct gacgcactac tgtcaaccac 2881 cggctacgtc tccatctggg tgcaaaaccc actagtcgga ccccacaccg cccctgcgtc 2941 ggccctcgtt caggcattca tctccgcggg tgaatccttt aacgtccggt tgatgcaaaa 3001 ccccgccctc acctcccaga ccctcaccga ggatctcgat gcaccacaag acaccggcaa 3061 catcgagaat ggcgccgcgg acaacacccc acaaccgcgc accactttcg actacaccga 3121 gaatcctctg ccccctgaca ccaaactgga aaacttcttc tccttctacc ggttgctgcc 3181 catgggcaac aacggtgctc cctcactttc cttccccgcc aacgaaggca cagtcatccc 3241 cctcaaccct atcaattggc ttcagggagc cgacgtgtcc ggaatcgcgt cgatgctatc 3301 gtgcttcaca tacatcgccg cggatctccg gatcacgctc aggttcgcca atccaaacga 3361 caaccccgcc accatgcttg tcgccttcgc cccgcctggc gcaacaatcc ctctccatcc 3421 cacgcgccaa atgctctcaa acttttacat ggcagaggtt ccggtctcgg ccgctacctc 3481 taccatggtc tccttttcca tcccctacac ttctcccctc tccgccatcc ctacctcgta 3541 cttcggatgg gaggactggt caggcaccaa ctttggccag ctctcttccg gatcatgggg 3601 caacctcatg ctcatcccct ccctcgccgt cgactctgcc attcccttcg acttccagct 3661 ctcctgctgg gtcgccttcg gcaacttcaa agcctgggtt ccccgccccc cccctcctct 3721 cccacccctc cccaccccag ccaccaacgc ggaacgcaca gtggccgtca tcaaacaagg 3781 tgccgccacc gccacaccag acgtgaaccc cgacgaccgg gtctacatcg tgcgtgcgca 3841 gcgtcccacc tacgtccact gggccatccg caaggtctcc ccagacggca gtgctcaaca 3901 gatctcgctg tcccgcagcg ggatccgggc actggtcgcc ctcgaacccc ccgagggcga 3961 actccacctt gaagtccttc cctcacattg gactctcgct gaactccaac tcggcaacga 4021 gtgggagtac agtgccacca acaactgcac ccacttcgtc agttccatca ctggcgaacc 4081 cctcccaaac accggcttct cccttgctct cggtatcggt gccctcaccg ccatcgcagc 4141 ctcggctgct gttgccgtga aagcgctcaa aggcatcagg cgccagggcc tcctcaccct 4201 ctctgccgat actgaaacca atcaaaccct caacaaaatc actgaatctg tcaatcaagc 4261 agctcaggtt gtttcacagt tcgacctgag cggccctgca aattctgtct cccttgccgc 4321 ctctgacatt cgagaggccg cccacaaagt ggcctcctcc ctcaatggct tcaccgacgt 4381 catcgccgac atcaaggatt ccctcttcac ccgggtttcc gatgccgtcg agactggcgt 4441 tgccaccttc ctcacctggc tcgtcaaact ctttggctac ctcttggtcc tctttggatc 4501 tcccactccc atatctatct ctggcctcct tgtaatcatc tgtgctgatc ttgcccccca 4561 cgcccgcgag ttcttcactg cttctgaaaa tgttctctcc tctctctact actggattgc 4621 cacaaagcta ggcctgtccg tcacacccca agagtgtgaa cgggtgaccc ttgaacctca 4681 agggctcaaa gacttcaacg acggcgcact cgcaatgcgc aacgtcgagt ggattggtga 4741 gactgcctgg aaatgggccc accgcctcct tgactggatc cgcggtaagg ccaaaaccga 4801 ccctcaggca aagctcgccg acgtccacga tgaaatcatg ctccactact cagactccat 4861 attggctctc ggatctgaga aactcccaat tgaacacatc acacaatcca tctcccgctg 4921 ccgggaactg gtctccatcg cccaagaggc caagtccggc ccccactctt ccttcctcaa 4981 ccaatccatc aaaaactaca ctcttgccat ctcccaacac cgcaagcgcc aaaccggtcc 5041 acgaccggaa cccgtggtgg tctacctcta cgggccaccc ggtactggca aatccctgct 5101 tgcttccctc ctcgctcaaa ccctctccca acgcctctct ggcacccccg acgacgtcta 5161 ctccccctcc tccgcttcct gcgaatactt cgatgggtac accggccaag ccgtgcactt 5221 catcgatgac atcggacagg atccggaggg gcgggactgg gcaaacttcc ccaacctcgt 5281 ctcctctgct cccttcatcg tccccatggc ctccctcgag gaaaaaggca cccactacac 5341 ctccaaggtc atcgtggtca cctccaactt ccacgagcct aacgagcgcg ccgcgcgctc 5401 gatgggtgcc ctcagacgcc gcgtccacct gcggatcaac gtcacctcaa acggagtccc 5461 atttgacccc accaatgctc tcaaccccat ccctggaacc caatccaaat acttcactgc 5521 ccaaacccct ctcactctct tccagtccaa cacggttcgc ctggaccgtg actccatctg 5581 gaccccctcc ttctccaaca tggacgaact ggttgacgcg atcgtgaccc gtctcgaccg 5641 ctccaccggt gtgtccaact ccctcgcctc cctcatcaaa cgccagggca accgggtcat 5701 cgatgcggaa cccagggaaa tccccctgga atacgccgac gatctcctgg aagctatggc 5761 acaccaccgc cccgttccct gctcccttgg cctctcccag gccatcgcaa acaacacccc 5821 cctccaacaa atttctgaca ccttctggaa ataccgcaaa cccatcttca cttgcaccac 5881 tttccttgct gtcctcggct ttctctgctc tgtcatccct ctcgcccgct cactgtggaa 5941 gtcccgccaa gacacgccac aggaaacgca ggctgcttac tctgccattc cgcaccaaaa 6001 gcccaaaccc aaatcccaaa aacccgtccc cacccgccac atccagcggc agggcatctc 6061 ccctgccgtc cccggcatct ccaacaatgt cgtccatgtt gaatccggca acggtctcag 6121 caagaacgtc atgtctggct tctacatctt ttcccgcttc cttctcgtcc ccacccatct 6181 ccgtgaaccc caccacacca ccctcatggt gggcactgat acctacgact gggccaccct 6241 ccagacgcag gaattcggtg aaatcaccat tgtccacacc ccaacctccc gccagtacaa 6301 ggacatgcgg cgctttattg gtgctcatcc ccaccctact ggtctcctgg tctctcaatt 6361 caaagcagcc cccctctacg tccgcatctc cgacaaccgg atcctggatc tcgactttcc 6421 cggagttgtc gtctgtaaac aggcatatgg ttaccgcgcc gcgaccttcg aaggtctgtg 6481 cggttccccg cttgttacgg atgatccctc tggcgtcaag attctggggc tccacgttgc 6541 tggggtcgcg ggcacgagtg ggttctctgc ccccatccac cccatcctta gccaaatcac 6601 ccagttcgct accactcaac aatctctcat tgtccccacc gctgaagtcc ggcctggcgt 6661 caacgtcaac cggatgtccc gcttgcaccc ctcccccgcc tacggtgctt tccccatcaa 6721 gaaacaacct gcccccctca agcggaatga ccgccgcctg caggagggtg ttgatcttga 6781 cacccagctc ttcctcaaac acggtaaagg cgacgtcacc gagccctggc ccggtctcga 6841 agctgctgct gacctctact tctccacttt cccctcttcc cttcctgtcc tgacccagga 6901 acaggccatc catggtacac caaacatgga gggcctggac atgggacagg ctgcagggta 6961 cccctggaac acccttgggc gctcccggcg atctctcttc aacgagactg agccgggggt 7021 gttcgtcccc aaacccgaac tccaagctga aatcaaccag acacttgaag acccggatta 7081 cgtgtactcc accttcctca aggacgaact cagaccaacc gccaaggttg aacagggatt 7141 gaccagaatc gtcgaagctg ccccgatcca cgctatcgtc gctggccgga tgctcctcgg 7201 tggtctcata gactacatgc aggggcgtcc tggtgagcac ggtagtgctg tcgggtgcaa 7261 cccagacgtc cactggactt ccttcttcta cgccttcagt gagttctccc aggtatacga 7321 tctggactac aagtgttttg atgctaccct cccctctgct gtcttcactc ttgttgccaa 7381 acacctcacc cgcatcaccg gagacccccg cgtcggtcgc tacatccatt ccatccgcca 7441 ttcacaccac atttatggca accacatgta cgacatgatc ggggggaacc cgtccggttg 7501 tgtggccacc tccatcctca acactatcat taacaacatc tgtgtcctct ctgccctcat 7561 ccaacacccc gatttttccc cctcccgctt tcacatcctc gcgtacggtg acgacgtcat 7621 ctacgccacg gaacccccca tccatccctc cttcctgcga gagttctacc agaaacacac 7681 ccccctggta gtgactcccg caaacaaagg gcaggacttc ccccccacgt ccacgatcta 7741 tgaagtcacc ttcctcaagc gctggttcgt tccggacgat gttaggccca tctacatcca 7801 ccctgtgatg gaccctgaca cgtacgaaca atcagtgatg tggttgcgtg atggagattt 7861 ccaggacgtg gtgacctccc tttgtcacct tgccttccac agcggaccca agacgtacgc 7921 tgcctggtgc acgcaagtgc gcgagcagtg tctcaagtcc gggttcgccc ccaacttcct 7981 tccttactcc tacctccaac tccgctggct caacctgcta gcagcctgat agttagggaa 8041 cacagtgctt cggcacgctt agttagttag aaccctctgc ccactcctcc atggtgatat 8101 aaagaccacc cacacttttc gggtgagccc ctaagccatg gttgtactgc actatcaatc 8161 taagacggtc cttctccgga tcgcactttc ctcctggtgc cgcgcctcct tcgggagctg 8221 cacccgcgga ccaggatagt ctttgaactt ttctaactgt tcttac //