LOCUS KY381277 4235 bp cRNA linear VRL 29-JUL-2017 DEFINITION Akabane virus strain GXLCH01 segment M polyprotein gene, complete cds. ACCESSION KY381277 VERSION KY381277.1 KEYWORDS . SOURCE Akabane virus ORGANISM Akabane virus Viruses; ssRNA viruses; ssRNA negative-strand viruses; Bunyavirales; Peribunyaviridae; Orthobunyavirus. REFERENCE 1 (bases 1 to 4235) AUTHORS Tang,H.-B., Chen,F., Rao,G., Bai,A., Jiang,J., Du,Y., Ren,P., Liu,J., Qin,S., Yang,L. and Wu,J. TITLE Characterization of Akabane virus from domestic bamboo rat, Southern China JOURNAL Vet. Microbiol. 207, 280-285 (2017) PUBMED 28757035 REFERENCE 2 (bases 1 to 4235) AUTHORS Tang,H.-B., Chen,F., Rao,G., Jiang,J., Bai,A., Du,Y., Ren,P., Qin,S., Yang,L. and Wu,J. TITLE Direct Submission JOURNAL Submitted (21-DEC-2016) Guangxi Veterinary Research Institute, 51 You Ai Road, Nanning, Guangxi 530001, China COMMENT GenBank Accession Numbers KY385908, KY381277, and KY381282 represent sequences from the three segments of Akabane virus strain GXLCH01. ##Assembly-Data-START## Assembly Method :: DNAstar v. 5.0 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4235 /mol_type="viral cRNA" /country="China" /isolation_source="brain" /segment="M" /collection_date="16-Aug-2016" /host="Rhizomys pruinosus" /db_xref="taxon:70566" /strain="GXLCH01" /organism="Akabane virus" CDS 1..4206 /codon_start=1 /protein_id="ASM94323.1" /translation="MIITILNIITLAVIVTAMPPRNTNGGRCFYGGNMFRQINSTSPM SEVCVRDDISLVKSIGYHKLAANREVIESSMSYYRLYYVKNWFECNPVQDILGTFIVF DVNHEGILAPKTYACRATCSISLERDTGNVVLESPALNHYTIHGTTIKNGWFKTKVSI DLDNTCEDLHITCGHKTLNVHACFRQHKSCIRYFKGSILPEIMIESICTNAELILLCC FSAISCFVAIMLTKTYLVYLLIPIFYPFVKLYGLLLLRFCKQCKNCLLPIHPFTPCPT TCICGMVYNSSEALKVHRKCLNCTGYKTLTKTRYLCKKKLPNVVLATISTVLFFTFIT PITAECYNYTSLPADFQAAIDKNNSCTREQLIMIILTTLCIASIIVVISAVHLYIRIC YVFCAYCGMVHEKKGLVLLDNFTSHCLTCICRDKSIHRANNNCVAPMKYKTAKYTNLV CIVFLIIIAVTPAFSTCIQEKEIETIDDAATCIALYQNITQPKEYNAFVKELSSTLSS HEIEFLLPAVKPSFDYLTTKSSTSKDLHSATIHEFIAANLYPNNFKKHLTPAGPDSIQ WRTYIHNNNLHLCNDHVVKMICRCVIKQEECSSTTVDDGEQIVHYYKRNKEFYRADLE ILYTVISRAIPGLVGNLLRQVLKSQKYDESLHVLNKIKKDVSKINQLNGIVEFLIHIN SKNITEEVRELRIKPDLSVKGSKFTTKNSRTPNIKECQTPLFITCTGKRFRSLTKQYI ACSNGGVKLYQRPNKPLTLVGDKLCIGDKHCMIAFDPAVVDENIQKLDCYSLAATDQS NGMLKPERSIRLLKTGECKIAGVLSRIAVSINQKNYKYTTIVHKKSDLVDEYCLSPNC DVDCYPYYSDNLADCSWSESTHSTVSQKVISHTDIESFISSIKLSLHNDLIQHHFRPL SNMPHIKPNFKSINVQGTISGSKIQDSYITFSIPLMTGLSQGFTLQDHKGNTLFDIIA YVKSARVVATYNHDYKTGPTVSINVQHNEQCTGSCPSNIPKKDNWLTFSREHTSTWGC EEWGCLAIGTGCVYGSCQDVIREEATVISRVNNEQLEVEFCVSEPTGTMCNTINVLEP VLGEHMQFEVHGVQTNLLPEVALIKNRRVYKGSINKKGVFNPQCGSVQSFDGKLYGVG NPKFDYICHALSRKDIVVRKCYENHYYSCATLKEAVEIKSNITNSKTMLYNDNALLGS ASIKIMLGDLIYQQASVQERDIRGHATCGGCTDCFNDVACKVSMTSNGVYQCPIVSSC DSYINNVYVSEGTNDVSLKFRCLKAEIKISICGKEIPVKSEIIKDTKKLDLASADQTS YIKEFDKKCATWLCRAYNEGIGFILEPLWNELSLWGKYVMLALAIIISILILIKVIRP LARYIVAILKENDKVYKLENKLK" /product="polyprotein" misc_feature 1597..4020 /db_xref="CDD:281546" /note="Bunyavirus glycoprotein G1; Region: Bunya_G1; pfam03557" misc_feature 79..927 /db_xref="CDD:281551" /note="Bunyavirus glycoprotein G2; Region: Bunya_G2; pfam03563" misc_feature 928..1395 /db_xref="CDD:211933" /note="bunyavirus nonstructural protein NSm; Region: bunya_NSm; TIGR04210" ORIGIN 1 atgattatta caattctcaa cataattaca ttagcagtca ttgtgactgc aatgcctcct 61 cgtaatacga atgggggtcg atgcttttat ggcggcaata tgtttcgcca gatcaactca 121 acatcaccaa tgagtgaggt ctgcgtcaga gatgacatat ccctagttaa atctattggt 181 tatcacaaac tggcagcaaa cagagaagtt atcgaatcaa gtatgtcgta ctacaggttg 241 tattatgtca aaaattggtt tgagtgcaat cctgttcaag atattcttgg aactttcata 301 gtatttgatg taaatcatga gggcatcttg gcacctaaga catatgcttg tagagctaca 361 tgttcaataa gtttagaacg ggacactggc aatgttgtgt tggagtcccc agcattaaat 421 cattacacca tacatgggac aactatcaag aatggctggt ttaagacaaa ggtctctata 481 gatctggaca acacatgtga ggacctacat attacatgcg gtcacaaaac ccttaatgtt 541 catgcatgct ttagacaaca taaatcatgt attcgttact tcaagggatc aatcctacct 601 gaaatcatga tcgagtcaat ctgtacaaat gcagagctga tattactatg ctgcttctct 661 gcaatttcct gctttgtggc cattatgttg acaaagacat atttggtgta tctgcttata 721 ccaatttttt acccgtttgt taagctttat ggcttattat tgctaagatt ctgcaagcaa 781 tgtaagaact gcttattacc aattcatcct tttaccccat gtccaacaac gtgtatctgt 841 gggatggttt acaattctag tgaagcctta aaagttcaca ggaaatgctt aaactgcact 901 ggctacaaga ctctaactaa aacaaggtat ttgtgtaaaa agaaactccc taatgtggta 961 ctggccacta tcagcacagt gctattcttt acttttataa cccctataac agctgaatgc 1021 tacaattaca caagcttgcc agcagatttc caagctgcta tagataaaaa taattcttgc 1081 acacgtgaac aactaataat gatcatatta acaaccctgt gtattgcctc aatcattgtg 1141 gttatatcag cagttcacct gtacatacgg atatgttatg tattttgtgc ttattgtgga 1201 atggtacatg aaaagaaggg cctggtttta ctagataatt tcacgtctca ttgccttacg 1261 tgcatttgtc gtgataaaag catacacaga gccaacaata attgtgttgc tccgatgaaa 1321 tacaaaactg ccaagtatac caatctagtg tgcattgtct tcctgattat cattgctgtt 1381 acccctgctt ttagtacttg catacaagag aaggaaatag aaacaataga tgatgctgca 1441 acgtgcattg ctctatatca aaatataacc cagccaaagg aatacaatgc ctttgtgaaa 1501 gaactttcat caacattaag cagccatgaa attgaattcc tcctgccagc tgttaagcca 1561 tcattcgact atctgacaac taaatcatct acatctaaag atctccacag tgccacaatt 1621 catgaattta tagctgcaaa tctctatccc aacaacttca aaaaacacct gacaccagca 1681 gggccagaca gcatacaatg gagaacatat attcataata ataacttgca tttatgcaac 1741 gaccatgttg tcaaaatgat atgccgctgt gtaatcaagc aggaggaatg cagctctacg 1801 acagtagatg atggtgaaca gattgtgcat tactataaga ggaacaaaga attttataga 1861 gctgatctag agatactata cacagttata tcaagggcaa tcccaggatt ggtcggtaat 1921 ttactgcgac aagttctaaa gtcgcaaaag tatgatgagt cgttgcatgt cttaaataag 1981 attaagaaag acgtttcaaa aattaaccaa ctgaatggca tagtagaatt cttaatacat 2041 atcaattcaa agaacataac agaagaggtc agggagttaa gaattaagcc tgatcttagt 2101 gtcaaggggt ccaaatttac aactaagaac tcacggactc ctaacatcaa agaatgccaa 2161 actccattat tcatcacatg cactgggaag agattccgat cactaacgaa acaatatatt 2221 gcatgctcca atggaggtgt taaattgtac caaagaccaa acaagcccct aacacttgta 2281 ggtgataagc tctgcattgg tgataaacac tgtatgatag catttgaccc agcagtagta 2341 gatgaaaata tacaaaaact ggattgctat agtctggctg ccacagacca atcaaatggg 2401 atgttgaaac ctgaaaggtc tattcgactc ctcaaaacag gcgaatgtaa aatagcaggg 2461 gtattatcta gaattgcggt gtcaataaat cagaaaaatt ataaatacac cactatagtt 2521 cataagaaaa gtgatttagt cgacgagtat tgtctaagcc caaattgtga tgtagattgc 2581 tacccttatt attcagacaa cctagctgac tgctcttgga gtgaatcaac tcattctact 2641 gtgagccaaa aagtgatatc tcacacagat atagaatcat tcatatctag tattaaactc 2701 tctttgcaca atgatctgat ccagcatcat ttcaggccgt taagcaacat gccacatata 2761 aagcctaatt ttaaatcaat aaatgttcaa gggacgattt ctggcagcaa gattcaagac 2821 agctatataa cattctcaat accattgatg actggactat cacaaggctt cacattgcaa 2881 gatcacaaag gcaacaccct ctttgacatt atagcatatg taaaaagtgc gcgtgtagtt 2941 gcgacatata accatgatta taaaactgga cccacagtga gcatcaatgt tcaacacaat 3001 gaacaatgta caggatcctg ccccagtaat atacctaaaa aagataattg gctcaccttc 3061 tctcgcgagc atacaagcac ctggggctgt gaagaatggg gttgcctagc aataggcacg 3121 gggtgtgtat atgggtcctg ccaagatgtc attagagaag aagcaacagt tatttccaga 3181 gtaaataatg agcaattgga agttgaattt tgtgtttcag agcctacagg tacaatgtgt 3241 aatactatta atgtacttga accagtactg ggagagcaca tgcagtttga agtccacggt 3301 gttcagacta atctattgcc tgaagtggct ttgatcaaaa ataggagggt gtataaagga 3361 tcaataaaca agaaaggtgt attcaaccct caatgtggtt cagtccagtc atttgatggc 3421 aaactctatg gtgttgggaa tccaaagttt gactacattt gccacgcttt atcaaggaaa 3481 gatatagttg tgagaaaatg ttatgaaaat cactactatt catgtgctac actcaaggaa 3541 gctgtagaaa tcaaatcaaa tatcacaaac tctaaaacta tgctttataa cgataatgct 3601 ttactcggta gtgcatcaat aaagataatg ttaggcgatc taatatatca acaagcatca 3661 gtgcaagaaa gagatataag aggtcatgca acttgcggag gttgcacaga ttgttttaac 3721 gacgttgcat gtaaagtcag catgacttca aatggtgttt accagtgccc aatagtatca 3781 tcctgtgatt cttatatcaa taatgtttat gttagcgaag gcacaaatga tgttagcttg 3841 aagtttcgat gtttaaaggc agaaatcaaa ataagtattt gtggtaaaga gatccctgtt 3901 aaatctgaaa taattaagga tacaaagaag ctggatttag ccagtgctga tcaaacatct 3961 tatatcaaag aatttgataa aaaatgtgcc acatggctat gccgagctta caatgaggga 4021 attggattta tcttggaacc attatggaat gagttgagtt tgtgggggaa gtatgttatg 4081 cttgcattag ctataattat cagtatccta atccttataa aagtaataag gccactggca 4141 agatatattg tcgcaatact taaagagaac gacaaagtgt acaaattgga aaataaattg 4201 aaataatcta atttaaatag acataatggg agggt //