LOCUS KY381282 6859 bp cRNA linear VRL 29-JUL-2017 DEFINITION Akabane virus strain GXLCH01 segment L RNA-dependent RNA polymerase gene, complete cds. ACCESSION KY381282 VERSION KY381282.1 KEYWORDS . SOURCE Akabane virus ORGANISM Akabane virus Viruses; ssRNA viruses; ssRNA negative-strand viruses; Bunyavirales; Peribunyaviridae; Orthobunyavirus. REFERENCE 1 (bases 1 to 6859) AUTHORS Tang,H.-B., Chen,F., Rao,G., Bai,A., Jiang,J., Du,Y., Ren,P., Liu,J., Qin,S., Yang,L. and Wu,J. TITLE Characterization of Akabane virus from domestic bamboo rat, Southern China JOURNAL Vet. Microbiol. 207, 280-285 (2017) PUBMED 28757035 REFERENCE 2 (bases 1 to 6859) AUTHORS Tang,H.-B., Chen,F., Rao,G., Jiang,J., Bai,A., Du,Y., Ren,P., Qin,S., Yang,L. and Wu,J. TITLE Direct Submission JOURNAL Submitted (21-DEC-2016) Guangxi Veterinary Research Institute, 51 You Ai Road, Nanning, Guangxi 530001, China COMMENT GenBank Accession Numbers KY385908, KY381277, and KY381282 represent sequences from the three segments of Akabane virus strain GXLCH01. ##Assembly-Data-START## Assembly Method :: DNAstar v. 5.0 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..6859 /mol_type="viral cRNA" /country="China" /isolation_source="brain" /segment="L" /collection_date="16-Aug-2016" /host="Rhizomys pruinosus" /db_xref="taxon:70566" /strain="GXLCH01" /organism="Akabane virus" CDS 29..6784 /codon_start=1 /protein_id="ASM94324.1" /translation="MDNYKINQYRARINDANDPETAKDILADLLMDRHNYFGRELCYY LDIEYKNDTPIDDILLDFLPPGTDFKARYCTPDNYIIHNRKLYVLDYKVAVDNESSAK TFEKYDKIFGDVLVPLGLDYEIVVVRADPVRDVIHVNSEDFLNEFGPINMNLDFTWFY NLRALIYDKFKDDERFLEIASQGEFTMTGPWLDDETPELYDHPIFKEFYDSLPNESKI TFQRSMNFDATKGDKWNQNLVDTIHEYTPSYNLFIKNASSGIFKCHGDYPKPSNSEIT QGWQLMTERITSERELTNDINKQKPSVHFLWCPPSEESNENIKKLLRLSKMLQKLDGT STYLDAFKAIGILMDFSSNVGLYESHTSKLKNMSRQTSKKIDKKIEAIKIGTSTVMWE QQFVFDTNVIDHQSKGKLFKEFMGIGNHKQFSKKTIEDIDISKPTILDFNNKNIIDKC IFQYKNVDKILSKPNMLNKMGCYLEEYGPQICAASEETWETLKLICNMSYWSAIKDFS TLMKNMLAVSQYNRHNTFRVVTCANNNLFAIVMPSSDIKTKRATLAYFIICIHDHKDD IMHHGALHATFRSGGKYVSVSKGIRLDKERCQRIVSSPGLFLLTTLLMYNNNPTIKIE DVANFAFHTSLSITKAMLSLTEPSRYMIMNSLAISSHVKDYIAEKFSPYTKTSFSVIM ADLIKKGCYNAYKQRSKVDLRSIHLTDYEITQKGVNNNRDLSSIWFEGKVSLKEYINQ IYMPFYFNSKGLHEKHHVMIDLAKTVLEIEHDQRLNIPGIWSNTPQKQTVNLPVLIYA ISKNLLMDTSRHNYIRSRIENSNNLKRSITTISTFTSSKSCIKVGDFTDFKSRESRIV NAKLEKDIRKYTIANPEFVEDLTEKATIRHAIYDDLKKAIPDYIDVMSTKVFDAVYYK IKHGEITDRPAVEHILQVMKDHKRFVFTYFNKGQKTAKDREIFVGEFEAKMCLYLVER ISKERCKLNPDEMISEPGDGKLKKLEDMAEYEIRYTANTLKSMKDKALQEFSRFADDF NFKPHSTKIEINADMSKWSAQDVLFKYFWLFALDPALYKPEKERILYFLCNYMDKVLV IPDDVMTSILDQRVKREQDIIYEMTNGLKQNWVSIKRNWLQGNLNYTSSYLHSCCMNV YKDIIKNVALLLEGDVLVNSMVHSDDNHTSITMIQDKLSDDIIIEYCIKLFEKICLSF GNQANMKKTYVTNFIKEFVSLFNIYGEPFSVYGRFLLTAVGDCAFLGPYEDTASRLSA TQTAIKHGAQPSVAWVAIALTQWITHSTYNMLPGQNNDPLNVLTSQNRFDIPIELCGL LNTDLPTLAIAGLEAGNLTYLVNLSRRMSKIQLLRESIQSQYADIESWDLSKLTQMDK FKLKLLRFMTLDSAMSSDDGMGETSDMRSRSLLTPRKFTTHASLVRLESYNDFQKLVQ DQSQIDDLFEFFIRMPQLLVTKGETTEEFMKSILFRYNSRKFKESLSIQNPAQLFIEQ VLFANKPMIDYTSIHDRLFGIQDDPNIDDCTMIIGKKTFIETYRQIQIDLNKFEITNQ DVKTIYAFCLMNDPILVACANNILLSMHGLQMNRNGMTCCMMPEIKSLKVIYHSPALV LRAYVQENNNIKGAEPDEMQRDLYHLEEFIAKTKLRESMQARIAKNELKTMGRDFKFE IQELTKFYQICYDYIKSTEHKIKIFILPKRAYTPIDFCGMITGNTLKDQCWFTIHYLK QITVPARKAQIATSLDLEIQIAYEALRLIAHFADTFIAENSRVPFLKQVISKFLYKGI QMQVLYNKIKASRLRTKILPILFYMGDLEQLDVDRYDAEKAEEQITWNNWQVSREFTT GPIDLSIKGYGRSIRIIGEDTRLTAAELQINRMRNDIISRHGQSLLNKPHGLKFEKMD EVEFLDDKLHYIVYQLRDRKRYYYNILSTNAIYEHNDRLSQTRSRRNNRWIPVCPVAI SKYVNTDRPILDRIEMLNIDNTKLTSLQVAVSDTAMVRKAALAKMSFFEGPPIQCGGI DLSKLMQNQTIINLDINKISSISLLDLCRIFSCRGYSNDQDAFEFLSDEVMNEDISEE LDSSPVLKITYTKKSNSQNTFKNAIVKALVRECDRFEEIFDLSDDGFTSDTNLELLEN LVWILNHLKTNQWSTELMECIHMCLYRNEMDHIYHNFQIPDVFVTDPIELSIKWLDVI EFLEMILAHDFKSEPWISIMNHSITKAIDYSRLEHKKTSAQANISKFIKGKKMGGRSK FDF" /product="RNA-dependent RNA polymerase" /note="pol" misc_feature 1802..4039 /db_xref="CDD:282102" /note="Bunyavirus RNA dependent RNA polymerase; Region: Bunya_RdRp; pfam04196" misc_feature 44..346 /db_xref="CDD:317864" /note="L protein N-terminus; Region: L_protein_N; pfam15518" ORIGIN 1 tagtgtaccc ctaaatacaa catacaacat ggacaattac aagatcaatc aatatcgtgc 61 taggattaac gatgcgaatg atccagagac tgctaaagat atattagctg atctattaat 121 ggatcgacat aactactttg gcagagaact ctgttactat cttgatattg agtataaaaa 181 tgacacgcca attgatgata tcctcctgga tttcttacca ccaggaactg atttcaaggc 241 tagatactgt acacctgaca attatataat tcacaacaga aagttatatg tattggatta 301 caaggttgct gtcgataatg aatcttcagc taagactttt gaaaagtatg acaagatatt 361 tggcgatgtt ttggtgccat tgggcctgga ctatgagata gttgttgtta gggcagaccc 421 ggtacgagat gtgatacatg tcaattcgga agacttcctt aatgagttcg ggccgattaa 481 tatgaacttg gattttactt ggttttacaa tcttcgtgca ttaatatatg ataagtttaa 541 agacgatgaa cgctttttgg aaatagccag ccagggtgaa tttacaatga ctgggccatg 601 gcttgatgac gaaacaccag aattatatga tcatcctata tttaaagagt tttatgattc 661 tctgccaaat gagtcaaaaa ttacctttca gcggtcaatg aacttcgatg caacaaaagg 721 tgacaaatgg aatcaaaacc tggttgatac aattcatgaa tatactccaa gttataatct 781 ctttataaaa aatgcctcat ctggcatttt taaatgtcat ggagattacc cgaaacctag 841 caattctgaa atcacacaag gttggcaact aatgacagag agaataacta gtgaaagaga 901 actaactaat gacataaata aacaaaaacc ttctgtccac ttcctctggt gtccaccaag 961 tgaagagtct aatgaaaata tcaaaaagtt gttgcgatta tccaaaatgc ttcaaaagtt 1021 agatggcacc agcacatatt tagacgcatt taaagccatt ggtatcctga tggatttctc 1081 atcaaatgtt ggattgtatg aatcacatac aagcaagcta aagaatatgt caaggcaaac 1141 atcaaaaaag attgacaaga agattgaagc tataaaaatc ggtacatcaa ctgtaatgtg 1201 ggagcagcaa tttgtcttcg atacaaacgt tattgatcac cagtcgaagg ggaagctctt 1261 caaagaattc atgggaattg gcaaccataa gcaattttca aagaagacaa ttgaagacat 1321 tgacatctca aagccaacta tattagattt caataacaaa aacataattg acaaatgtat 1381 attccaatac aaaaatgttg acaagatatt atcaaagcca aatatgctaa ataagatggg 1441 atgttatctt gaagaatatg gcccacaaat ttgcgcagca tcagaagaaa catgggaaac 1501 acttaagctt atatgcaaca tgtcatattg gtcagcaata aaagatttct cgacattaat 1561 gaaaaacatg ctggcagtgt cgcagtacaa taggcacaac acattccggg tagtaacctg 1621 tgcaaataac aatttatttg ctattgttat gccatcttca gatattaaga caaagagggc 1681 aacactggca tactttataa tatgtattca cgatcataaa gatgacatta tgcatcatgg 1741 agctttacat gcaacattca gaagtggagg gaaatatgta agtgtctcaa aagggatcag 1801 attggataaa gagcgatgcc aaaggatagt ttcttcccct ggactattct tattaacaac 1861 actgctgatg tataacaata acccaacgat taagattgag gatgtagcaa attttgcttt 1921 ccatacgtct ctatctatta cgaaagctat gttatcttta actgagccat ctagatatat 1981 gataatgaat tcacttgcta tttctagcca tgtcaaagat tacatagcag agaaattctc 2041 accatataca aaaacaagct tctcagtgat tatggctgat ctgataaaaa aaggctgtta 2101 caacgcatat aagcagagat caaaagttga tctcagaagc atacatctaa cagactacga 2161 aataactcag aaaggtgtca acaataaccg tgatttatca tccatttggt ttgagggtaa 2221 agtgtcattg aaagaatata taaaccagat ttatatgccc ttttacttta attcaaaagg 2281 attgcatgaa aagcaccatg ttatgattga tcttgcaaaa acagtactag agatagagca 2341 tgatcaacgc ctcaatatac ctggtatatg gtctaatact cctcagaaac aaacagtgaa 2401 tctgcctgtt ttgatatatg ctatttcaaa aaacctctta atggatacat ctagacataa 2461 ttatattcgg tctagaatag aaaattcaaa taatttaaag cgatctatca ctactatcag 2521 tacttttact agttcaaaat catgcattaa ggttggcgac tttacagatt tcaagtcaag 2581 agaatcaagg attgtcaatg ctaaactaga gaaagatatc aggaagtata caatagcaaa 2641 cccagaattt gttgaagacc tgacagaaaa ggctactata aggcatgcta tttatgatga 2701 cttaaaaaaa gctataccag attatattga tgtaatgtct actaaagtat ttgacgcagt 2761 gtattataaa atcaagcatg gtgaaataac agacagacca gctgttgaac atatactcca 2821 agtcatgaag gaccataaga gattcgtctt tacatatttc aataaaggac agaaaacagc 2881 aaaagacaga gaaatatttg tgggagagtt tgaagccaaa atgtgcttat acttagtaga 2941 gaggatatcc aaagaaaggt gtaagctcaa cccagatgag atgattagcg aacctggaga 3001 tggcaagtta aaaaagcttg aagacatggc tgaatatgag attcggtata ctgctaacac 3061 attaaaatcc atgaaagaca aggcactgca agaatttagt agatttgcag acgacttcaa 3121 ttttaagcca cactcaacaa aaatagagat aaatgcagac atgtcgaaat ggagtgcaca 3181 agatgttctc ttcaagtatt tttggttatt tgctcttgat cctgcacttt ataaaccgga 3241 gaaagaaagg attttatact tcttatgcaa ctacatggac aaagtactag ttattcctga 3301 tgatgtgatg acgtcaatat tagatcaacg tgtaaaacga gaacaggaca tcatatacga 3361 aatgacaaat gggctaaaac aaaactgggt ttctattaaa cgaaactggc ttcagggcaa 3421 tctaaattat acatctagct acttacattc ctgttgtatg aatgtctaca aagacattat 3481 caagaatgta gctctgctcc tagaaggaga cgttttagta aactcaatgg ttcattcaga 3541 tgataatcac acttcaataa caatgattca agacaaactc tcagatgata tcattattga 3601 atactgcatt aaattatttg aaaagatatg cctatctttt ggaaaccagg ccaacatgaa 3661 gaaaacttat gttacaaatt tcatcaaaga atttgtttct ctgttcaata tctatggaga 3721 accgttctca gtatatggtc ggtttctgct tactgcagtt ggtgattgtg cattcctcgg 3781 cccgtatgag gatacagcaa gcaggttatc tgctactcaa actgcaatca aacatggcgc 3841 tcaaccatct gttgcttggg ttgcaattgc acttactcag tggataacac atagtactta 3901 taacatgcta cctggacaaa acaatgaccc actgaacgtt ttaacttcac aaaacagatt 3961 tgacatacct atagaacttt gtggattatt aaatacagat ttgccgacat tggcaatagc 4021 aggcttagaa gcaggcaatt tgacttattt ggtcaatttg tctagaagga tgtccaaaat 4081 ccagctactg cgcgaaagca ttcaatctca atatgcagac atagaatctt gggatttaag 4141 taaattgacg cagatggata aatttaaact taagttgttg aggttcatga cattagattc 4201 agctatgagt agcgacgacg gcatgggaga gactagcgat atgcgttctc ggtctctgtt 4261 aacgccacgg aaatttacaa cacatgcatc tttagttagg ttagaatctt acaatgattt 4321 ccagaaactg gtacaggacc agagtcaaat agatgactta ttcgaattct ttatcaggat 4381 gccgcaattg ttggttacta aaggggagac aactgaagag tttatgaaat caatcttgtt 4441 caggtacaat agcaggaagt tcaaagaatc cttatcaata caaaacccag cacaactttt 4501 tatagaacaa gtgttatttg caaacaagcc catgattgac tatactagca tacatgacag 4561 actttttggc atacaagatg atcctaatat agacgactgt acgatgataa tagggaaaaa 4621 gacctttatt gagacatatc ggcaaataca aatagatctt aataaatttg agatcactaa 4681 tcaagatgtc aagaccattt atgcattctg tctaatgaat gatcccatac tagtagcatg 4741 tgctaacaat attttgctat ctatgcatgg tctgcaaatg aatcgtaacg gaatgacatg 4801 ttgtatgatg ccagaaataa aatctctaaa ggtgatatat cattcgccgg ctctagtact 4861 acgagcatat gtacaagaaa ataataatat caagggagct gaacctgatg aaatgcagcg 4921 tgatctgtac cacctagagg agttcattgc caaaactaaa cttcgtgaaa gtatgcaagc 4981 tagaattgca aaaaacgaac ttaaaactat gggtagagac ttcaaatttg agatccaaga 5041 attaacaaaa ttttatcaga tatgttatga ttatataaaa tctactgaac ataaaatcaa 5101 aatattcatc ttacctaaac gagcttatac tccaattgac ttctgtggca tgatcacagg 5161 taacacatta aaagatcaat gttggtttac tatacattat ttaaagcaga ttacggtacc 5221 agcaaggaaa gcccagatag caacatcgtt agacttagag atacaaatag cctatgaagc 5281 attgagatta attgcacatt ttgcagacac atttattgct gaaaattcaa gagttccgtt 5341 cctcaagcaa gtcatatcaa aattcttata taaaggtatt caaatgcaag tgctatacaa 5401 taagataaaa gcctcccgac ttaggacaaa aatattacca attctgtttt acatgggcga 5461 tttggaacag cttgatgtag acaggtatga tgcagaaaaa gcagaagagc agataacatg 5521 gaataattgg caagtatcta gagaatttac aacaggacca attgacttgt caataaaagg 5581 atatgggaga tctataagaa ttataggaga agatacacga ctaactgcag ctgagctaca 5641 aattaaccgc atgagaaatg atataatatc aaggcatgga cagtcgctgt tgaacaagcc 5701 acatggtcta aaatttgaaa aaatggatga ggtagaattt ttggatgata aactgcatta 5761 tattgtctat cagttaaggg acagaaaacg ctattattat aatatattgt ctacaaatgc 5821 tatatatgaa cataatgaca gattgagcca aacaaggtca agaagaaata atcgatggat 5881 acctgtctgt ccggtagcaa tatcgaagta tgtcaataca gatagaccta tattagatag 5941 aatagaaatg ctcaatattg ataatactaa gctaactagt ctgcaagtgg ctgttagcga 6001 tactgcaatg gttagaaagg cagcacttgc aaaaatgtct ttctttgaag gtccacctat 6061 acagtgtggg ggtatagatc tttcaaaatt gatgcaaaac cagaccatca taaacttaga 6121 tatcaacaag atttcatcaa taagtctatt agacctttgt agaattttct catgtagggg 6181 ctattcaaat gatcaagatg catttgagtt cttatctgat gaagttatga atgaagacat 6241 atctgaagaa ctagacagtt cgccagtttt aaaaattaca tatacaaaaa agtcaaattc 6301 acaaaacaca tttaagaatg ctatagtaaa ggctttagta cgtgaatgcg acagattcga 6361 agagatattt gatctttcag acgacgggtt tacctcagat actaatttgg aactgttaga 6421 gaatctagtc tggatactaa accacttaaa gaccaaccaa tggtctacag aattgatgga 6481 atgtattcac atgtgcttat acagaaatga aatggaccat atataccata acttccaaat 6541 accagatgtg tttgtaacag acccaattga gctgagtatt aaatggttag atgtaataga 6601 attcctagaa atgatccttg ctcatgactt taagtctgaa ccctggatat caataatgaa 6661 ccactctatc acaaaagcta ttgattattc gcgtttagaa cataaaaaga cgagtgcgca 6721 agcaaatata tccaaattca taaaggggaa gaaaatgggt ggtcgatcaa aatttgattt 6781 ttaagtgaat tggtagagat cagtatgatt tttattgaca aagtgggttt agaataagta 6841 tattattgca tttaggggc //