LOCUS KY381283 6859 bp cRNA linear VRL 29-JUL-2017 DEFINITION Akabane virus strain GXLCH02 segment L RNA-dependent RNA polymerase gene, complete cds. ACCESSION KY381283 VERSION KY381283.1 KEYWORDS . SOURCE Akabane virus ORGANISM Akabane virus Viruses; ssRNA viruses; ssRNA negative-strand viruses; Bunyavirales; Peribunyaviridae; Orthobunyavirus. REFERENCE 1 (bases 1 to 6859) AUTHORS Tang,H.-B., Chen,F., Rao,G., Bai,A., Jiang,J., Du,Y., Ren,P., Liu,J., Qin,S., Yang,L. and Wu,J. TITLE Characterization of Akabane virus from domestic bamboo rat, Southern China JOURNAL Vet. Microbiol. 207, 280-285 (2017) PUBMED 28757035 REFERENCE 2 (bases 1 to 6859) AUTHORS Tang,H.-B., Chen,F., Rao,G., Jiang,J., Bai,A., Du,Y., Ren,P., Qin,S., Yang,L. and Wu,J. TITLE Direct Submission JOURNAL Submitted (21-DEC-2016) Guangxi Veterinary Research Institute, 51 You Ai Road, Nanning, Guangxi 530001, China COMMENT GenBank Accession Numbers KY381272, KY381278, and KY381283 represent sequences from the three segments of Akabane virus strain GXLCH02. ##Assembly-Data-START## Assembly Method :: DNAstar v. 5.0 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..6859 /mol_type="viral cRNA" /country="China" /isolation_source="brain" /segment="L" /collection_date="16-Aug-2016" /host="Rhizomys pruinosus" /db_xref="taxon:70566" /strain="GXLCH02" /organism="Akabane virus" CDS 29..6784 /codon_start=1 /protein_id="ASM94312.1" /translation="MDNYKINQYRARINNANDPETAKDILADLLMDRHNYFGRELCYY LDIEYKNDTPIDDILLDFLSPGTDFKARYCTPDNYIIHNRKLYVLDYKVAVDNESSAK TFEKYDKIFGDVLVPLGLDYEIVVVRADPVRDVIHVNSEDFLNEFGPINMNLDFTWFY NLRALIYDKFKDDERFLEIASQGEFTMTGPWLDDETPELYDHPIFKEFYDSLPNESKI TFQRSMNFDATKGDKWNQNLVDTIHEYTPSYNLFIKNASSGIFKCHGDYPKPSNSEIT QGWQLMTERITSERELTNDINKQKPSVHFLWCPPSEESNENIKKLLRLSKMLQKLDGT STYLDAFKAIGILMDFSSNVGLYESHTSKLKNMSRQTSKKIDKKIEAIKIGTSTVMWE QQFVFDTNIIDHQSKGKLFKEFMGIGNHKQFSKKTIEDIDISKPTILDFNNKNIIDKC IFQYKNVDKILSKPNMLNKMGCYLEEYGPQICAASEETWETLKLICNMSYWSAIKDFS TLMKNMLAVSQYNRHNTFRVVTCANNNLFAIVMPSSDIKTKRATLAYFIICIHDHKDD IMHHGALHATFRSEGKYVSVSKGIRLDKERCQRIVSSPGLFLLTTLLMYNNNPTIKIE DVANFAFHTSLSITKAMLSLTEPSRYMIMNSLAISSHVKDYISEKFSPYTKTSFSVIM ANLIKKGCYNAYKQRSKVDLRSIHLTDYEITQKGVNNNRDLSSIWFEGKVSLKEYINQ IYMPFYFNSKGLHEKHHVMIDLAKTVLEIEHDQRLNIPGIWSSTPQKQTVNLPVLIYA ISKNLLMDTSRHNYIRSRIENSNNLKRSITTISTFTSSKSCIKVGDFTDFKSRESRIV NAKLEKDIRKYTIANPEFVEDLTEKATIRHAIYDDLKKAIPDYIDVMSTKVFDALYYK IKHGEITDRPAVEHILQVMKDHKRFVFTYFNKGQKTAKDREIFVGEFEAKMCLYLVER ISKERCKLNPDEMISEPGDGKLKKLEDMAEYEIRYTANTLKSMKDKALQEFSRFADDF NFKPHSTKIEINADMSKWSAQDVLFKYFWLFALDPALYKSEKERILYFLCNYMDKVLV IPDDVMTSILDQRVKREQDIIYEMTNGLKQNWVSIKRNWLQGNLNYTSSYLHSCCMNV YKDIIKNVALLLEGDVLVNSMVHSDDNHTSITMIQDKLSDDIIIEYCIKLFEKICLSF GNQANMKKTYVTNFIKEFVSLFNIYGEPFSVYGRFLLTAVGDCAFLGPYEDTASRLSA TQTAIKHGAQPSIAWVAIALTQWITHSTYNMLPGQNNDPLNVLTSQNRFDIPIELCGL LNTDLPTLAIAGLEAGNLTYLVNLSRRMSKVQLLRESIQSQYADIESWDLSKLTQMDK FKLKLLRFMTLDSAMSSDDGMGETSDMRSRSLLTPRKFTTHASLVRLESYNDFQKLVQ DQSQIDDLFEFFIRMPQLLVTKGETTEEFMKSILFRYNSRKFKESLSIQNPAQLFIEQ VLFANKPMIDYTSIHDRLFGIQDDPNIDDCTMIIGKKTFIETYRQIQIDLNKFEITNQ DVKTIYAFCLMNDPILVACANNILLSMHGLQMNRNGMTCCMMPEIKSLKVIYHSPALV LRAYVQENNNIKGAEPDEMQRDLYHLEEFIAKTKLRESMQARIAKNELKTMGRDFKFE IQELTKFYQICYDYIKSTEHKIKIFILPKRAYTPIDFCGMITGNTLKDQCWFTIHYLK QITVPARKAQIATSLDLEIQIAYEALRLIAHFADTFIAENSRVPFLKQVISNFLYKGI QMQVLYNKIKASRLRTKILPILFYMGDLEQLDVDRYDAEKAEEQITWNNWQVSREFTT GPIDLSIKGYGRSIRIIGEDTRLTAAELQINRMRNDIISRHGQSLLNKPHGLRFEKMD EVEFLDDKLHYIVYQLRDRKRYFYNILSTNAIYEHNDRLSQTRSRRNNRWIPVCPVAI SKYVNTDRPILDKIEMLNIDNTKLTSLQVAVSDTAMVRKAALAKMSFFEGPPIQCGGI DLSKLMQNQTIINLDINKISSISLLDLCRIFSCRGYSNDQDAFEFLSDEVMNEDISEE LDSSPVLKITYTKKSNSQNTFKNAIVKALVRECDKFEEIFDLSDDGFTSDTNLELLEN LVWILNHLKTNQWSTELMECIHMCLYRNEMDHIYHNFQIPDVFVTNPIELSIKWLDVI EFLEMILAHDFKSEPWISIMNHSITKAIDYSRLEHKKTSTQANISKFIKGKKMGGRSK FDF" /product="RNA-dependent RNA polymerase" /note="pol" misc_feature 1802..4039 /db_xref="CDD:282102" /note="Bunyavirus RNA dependent RNA polymerase; Region: Bunya_RdRp; pfam04196" misc_feature 44..346 /db_xref="CDD:317864" /note="L protein N-terminus; Region: L_protein_N; pfam15518" ORIGIN 1 tagtgtaccc ctaaatacaa catacaacat ggacaattac aagatcaatc aataccgtgc 61 taggattaac aatgcgaatg atccagaaac tgctaaagat atattagccg atctattaat 121 ggatcgacat aactactttg gcagagaact ctgttactat cttgacattg agtataaaaa 181 tgacacgcca attgatgata tcctcctgga tttcttatca ccagggactg atttcaaggc 241 tagatactgt acacctgaca attatataat tcacaacagg aaattatatg tattggatta 301 caaggttgct gtcgataatg aatcttcagc taagactttt gaaaagtatg acaagatatt 361 tggcgatgtt ttggtgccat tgggtctgga ctatgagata gttgttgtta gggcagaccc 421 ggtgcgagat gtgatacatg tcaattcgga agatttcctt aatgagttcg ggccgattaa 481 tatgaattta gattttactt ggttttacaa tcttcgtgca ttaatatatg ataagtttaa 541 agacgatgaa cgctttttgg aaatagccag ccagggtgaa tttacaatga ctgggccatg 601 gcttgatgac gaaacaccag aattatatga tcatcctata ttcaaagagt tttatgattc 661 tctgccaaat gagtcaaaaa ttacctttca gcggtcaatg aatttcgatg caacaaaagg 721 tgataaatgg aatcaaaacc tggttgatac aattcatgaa tatactccaa gctataatct 781 ctttataaaa aatgcctcat ctggcatttt taaatgtcat ggagattacc cgaaacctag 841 caattctgaa atcacacaag gttggcaact aatgacagag agaataacta gtgaaagaga 901 actaactaat gacataaata aacaaaagcc ttctgtccac ttcctctggt gtccaccaag 961 tgaagagtcc aatgaaaata tcaaaaagtt gttgcgatta tccaaaatgc ttcaaaagtt 1021 agatggcacc agcacatatt tagacgcatt taaagctatt ggtatcctga tggatttctc 1081 atcaaacgtt ggattgtatg aatcacatac aagtaaacta aagaatatgt caaggcaaac 1141 atcaaaaaag attgacaaga aaattgaagc tataaaaatc ggtacatcaa ctgtaatgtg 1201 ggagcagcaa tttgtcttcg atacaaacat cattgatcac cagtcgaagg ggaaactctt 1261 caaagaattc atgggaattg gcaaccataa gcaattttca aagaagacaa ttgaagacat 1321 tgacatctca aagccaacta tattagattt caataacaaa aacataattg acaaatgtat 1381 attccaatac aaaaatgttg acaagatatt atcaaagcca aatatgctaa acaagatggg 1441 gtgttatctt gaagaatatg gcccacaaat ttgcgcagca tcagaagaaa catgggaaac 1501 acttaagctt atatgcaaca tgtcatattg gtcagcaata aaagatttct cgacattaat 1561 gaaaaacatg ctggcagtgt cgcagtacaa taggcacaac acattccggg tagtaacctg 1621 tgcaaataac aatttatttg ctattgttat gccatcttca gacattaaga caaagagggc 1681 aacattggca tactttataa tatgtattca cgatcataaa gatgacatta tgcatcatgg 1741 agctttacat gcaacattta gaagtgaagg gaaatacgta agtgtctcaa aaggaatcag 1801 attggataaa gagagatgcc aaaggatagt ttcttcccct ggactattct tattaacaac 1861 actactgatg tataataata acccaacgat taagattgag gatgttgcga attttgcttt 1921 ccatacgtct ctatctatta cgaaagctat gttatcttta actgagccat ctagatatat 1981 gataatgaat tcacttgcta tttctagcca tgtcaaagat tacatatcag agaaattttc 2041 accatataca aaaacaagct tttcagtgat tatggctaat ctgataaaaa aaggctgtta 2101 caacgcatat aagcaaagat caaaagttga tctcagaagc atacatctaa cagactacga 2161 aataactcag aaaggtgtca acaataaccg tgatttatca tccatttggt ttgaaggtaa 2221 agtgtcattg aaagaatata taaaccagat ttacatgccc ttttacttta attcaaaagg 2281 actgcatgaa aagcaccatg ttatgattga tcttgcaaaa acagtactag agatagagca 2341 tgatcaacgc ctcaatatac ctggtatatg gtctagtact cctcagaaac aaacagtgaa 2401 tttgcctgtt ttgatatatg ctatttcaaa aaacctccta atggatacat ctagacataa 2461 ttatattcgg tctagaatag aaaactcaaa taatttaaag cgatctatca ctactatcag 2521 tacttttact agttcaaaat catgcattaa ggttggtgat tttacagatt tcaagtcaag 2581 agaatcaagg attgtcaatg ctaaactaga gaaagatatc aggaagtaca caatagcaaa 2641 cccagaattc gttgaagacc tgacagaaaa ggccactata aggcatgcta tctatgatga 2701 cttaaaaaaa gctataccag attatattga tgtaatgtct actaaagtat ttgacgcatt 2761 gtattataaa atcaagcatg gtgaaataac agacagacca gccgttgaac atatactcca 2821 agtcatgaag gatcataaga gatttgtctt tacatatttc aataaagggc agaaaacagc 2881 aaaagacaga gaaatatttg tgggagagtt tgaagccaaa atgtgcttat acttagtaga 2941 gaggatatcc aaagaaaggt gtaaactcaa cccagatgag atgattagcg aacctggaga 3001 tggcaagtta aagaagcttg aagacatggc tgaatatgag attcggtata ctgctaacac 3061 attaaaatcc atgaaagaca aggcactgca agaatttagt agatttgcag acgacttcaa 3121 ttttaagcca cactcaacaa aaatagagat aaatgcagac atgtcaaaat ggagtgcaca 3181 agacgttctc ttcaagtatt tttggttatt tgctcttgat cctgcacttt ataaatcgga 3241 gaaagaaagg attttatact tcttatgcaa ctacatggat aaagtactag ttattcctga 3301 tgatgtgatg acgtcgatat tagatcaacg tgtaaaacga gaacaggaca tcatatacga 3361 aatgacaaat gggttaaaac aaaactgggt ttctattaag cgaaactggc ttcagggcaa 3421 tctaaattac acatctagct acttgcattc ttgttgtatg aatgtctaca aagacattat 3481 caagaatgta gctctgctct tagaaggaga cgttttagta aactcaatgg ttcattcaga 3541 tgataaccac acttcaataa caatgattca agacaaactc tcggatgata tcattattga 3601 atactgcatt aaattatttg aaaagatatg tctatctttt ggaaaccagg ccaacatgaa 3661 gaaaacttat gttacaaatt tcatcaaaga atttgtttct ctgttcaata tctatggaga 3721 accgttctca gtatatggtc ggtttttgct tactgcagta ggtgattgtg cattcctcgg 3781 cccgtatgag gatacagcga gcaggttatc tgctactcag actgcaatca aacacggcgc 3841 tcaaccatct attgcttggg ttgcaattgc acttactcag tggataacac atagtaccta 3901 taacatgcta cctggacaaa acaatgaccc attgaatgtt ttaacttcac aaaacagatt 3961 tgacatacct atagaacttt gtggattatt aaatacagat ttgccgacat tggcaatagc 4021 agggttagaa gcaggcaatt tgacttattt ggtcaatttg tctagaagga tgtccaaagt 4081 ccagctactg cgtgaaagca ttcaatctca atatgcagac atagaatctt gggatttaag 4141 taagttgacg cagatggata aatttaaact caagttgttg aggtttatga cattagattc 4201 agctatgagt agcgacgatg gcatgggaga gactagcgat atgcgttctc ggtctctgtt 4261 aacaccacgg aaatttacaa cacatgcatc tttagttagg ttagaatctt acaatgactt 4321 ccagaaactg gtacaggacc agagtcaaat agatgactta ttcgaattct ttattaggat 4381 gccgcaattg ttggttacta aaggggagac aactgaagag tttatgaaat caatcttgtt 4441 caggtacaat agcaggaaat tcaaagaatc cttatcaata caaaacccag cacagctttt 4501 tatagaacaa gtgttatttg caaacaagcc tatgattgac tatactagca tacatgacag 4561 actttttggc atacaagatg atcctaatat agatgactgt acaatgataa tagggaaaaa 4621 gacctttatt gagacgtatc ggcagataca aatagatctt aataaatttg agatcactaa 4681 tcaagatgtc aaaactattt atgcattctg tctaatgaat gatcccatac tagtagcatg 4741 tgctaacaat attttgctat ctatgcatgg tctgcaaatg aatcgtaacg gaatgacatg 4801 ttgtatgatg ccagaaataa aatctctaaa ggtgatatat cactcgccgg ctctagtact 4861 acgagcatat gtacaagaaa ataataatat caagggagct gaacctgatg aaatgcagcg 4921 tgatctgtac catctggagg agttcattgc caaaactaaa cttcgtgaaa gtatgcaagc 4981 tagaattgca aaaaatgaac ttaaaactat gggtagagac ttcaaatttg agatccaaga 5041 attgacaaaa ttttatcaga tatgttatga ttatataaaa tctactgaac ataaaatcaa 5101 aatattcatc ttacctaaac gagcttacac tccaattgac ttctgtggta tgattacagg 5161 taacacgtta aaagatcaat gctggtttac tatacattat ttaaagcaga ttacagttcc 5221 agcaaggaaa gcccagatag caacatcgtt agacttagag atacaaatag cctatgaagc 5281 attgagatta attgcacatt ttgcagacac atttattgct gaaaattcaa gagttccatt 5341 cctcaagcaa gtcatatcaa atttcttata taaaggtatt caaatgcaag tgctatacaa 5401 taagataaaa gcctcccgac ttaggacaaa aatattacca attctgtttt acatgggcga 5461 tttggaacag cttgatgtag acaggtatga tgcagaaaaa gcagaagagc agataacatg 5521 gaataattgg caagtatcta gagaatttac aacaggacca attgacttgt caataaaagg 5581 atatgggaga tctataagaa ttatagggga agatacacga ctgactgcag ctgagctaca 5641 aattaaccgt atgagaaatg atataatatc aaggcatgga cagtcgctgt tgaacaagcc 5701 acatggtcta agatttgaaa aaatggatga ggtagaattt ttggatgaca aactgcatta 5761 tattgtctat cagttaaggg acagaaaacg ctatttttat aatatattgt ctacaaatgc 5821 tatatatgaa cataatgaca gattgagcca aacaaggtca agaagaaata atcgatggat 5881 acctgtctgt ccggtagcaa tatcaaagta tgtcaataca gataggccta tattagacaa 5941 aatagaaatg ctcaatattg ataatactaa gctaactagt ctgcaagtgg ctgttagcga 6001 tactgcaatg gttagaaaag cagcacttgc aaaaatgtct ttttttgaag gtccacctat 6061 acagtgtggg ggtatagatc tttcaaaact gatgcagaac cagaccatca taaacttaga 6121 tatcaacaag atttcatcaa taagtctact agacctttgt agaatttttt catgtagggg 6181 ctattcaaat gatcaagatg catttgagtt cttatctgat gaagttatga atgaagacat 6241 atctgaagaa ctagatagtt caccagtttt aaaaattaca tatacaaaaa agtcaaattc 6301 acaaaacaca tttaagaatg ctatagtaaa ggctttagta cgtgaatgtg acaaattcga 6361 agagatattt gatctttcag atgacgggtt tacctcagat actaatttgg aactgttaga 6421 gaatctagtc tggatactaa accacttaaa gaccaaccaa tggtctacag aattgatgga 6481 atgcattcac atgtgcttat acaggaatga aatggaccat atataccaca acttccaaat 6541 accagatgtg tttgtaacaa acccaattga gctgagtatt aaatggttag atgtaataga 6601 attcctagaa atgatccttg ctcatgactt taagtctgaa ccctggatat caataatgaa 6661 ccactctatc acaaaagcta ttgattactc gcgtttagaa cataaaaaga cgagtacgca 6721 agcaaatata tccaaattca taaaggggaa gaaaatgggt ggtcgatcaa aatttgattt 6781 ttaagtgaat tggtagagat cagtatgatt tttattgaca aagtgtgttt agaataagta 6841 tattattgca tttaggggc //