LOCUS KY381285 6859 bp cRNA linear VRL 29-JUL-2017 DEFINITION Akabane virus strain GXLCH16-70 segment L RNA-dependent RNA polymerase gene, complete cds. ACCESSION KY381285 VERSION KY381285.1 KEYWORDS . SOURCE Akabane virus ORGANISM Akabane virus Viruses; ssRNA viruses; ssRNA negative-strand viruses; Bunyavirales; Peribunyaviridae; Orthobunyavirus. REFERENCE 1 (bases 1 to 6859) AUTHORS Tang,H.-B., Chen,F., Rao,G., Bai,A., Jiang,J., Du,Y., Ren,P., Liu,J., Qin,S., Yang,L. and Wu,J. TITLE Characterization of Akabane virus from domestic bamboo rat, Southern China JOURNAL Vet. Microbiol. 207, 280-285 (2017) PUBMED 28757035 REFERENCE 2 (bases 1 to 6859) AUTHORS Tang,H.-B., Chen,F., Rao,G., Jiang,J., Bai,A., Du,Y., Ren,P., Qin,S., Yang,L. and Wu,J. TITLE Direct Submission JOURNAL Submitted (21-DEC-2016) Guangxi Veterinary Research Institute, 51 You Ai Road, Nanning, Guangxi 530001, China COMMENT GenBank Accession Numbers KY381274, KY381280, and KY381285 represent sequences from the three segments of Akabane virus strain GXLCH16-70. ##Assembly-Data-START## Assembly Method :: DNAstar v. 5.0 Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..6859 /mol_type="viral cRNA" /country="China" /isolation_source="brain" /segment="L" /collection_date="20-Jun-2016" /host="Rhizomys pruinosus" /db_xref="taxon:70566" /strain="GXLCH16-70" /organism="Akabane virus" CDS 29..6784 /codon_start=1 /protein_id="ASM94318.1" /translation="MDNYKINQYRARINDANDPETAKDILADLLMDRHNYFGRELCYY LDIEYKNDTPIDDILLDFLPPGTDFKARYCTPDNYIIHNRKLYVLDYKVAVDNESSAK TFEKYDKIFGDVLVPLGLDYEIVVVRADPVRDVIHVNSEDFLNEFGPINMNLDFTWFY NLRALIYDKFKDDERFLEIASQGEFTMTGPWLDDETPELYDHPIFKEFYDSLPNESKI TFQRSMNFDATKGDKWNQNLVDTIHEYTPSYNLFIKNASSGIFKCHGDYPKPSNSEIT QGWQLMTERITSERELTNDINKQKPSVHFLWCPPSEESNENIKKLLRLSKMLQKLDGT STYLDAFKAIGILMDFSSNVGLYESHTSKLKNMSRQTSKKIDKKIEAIKIGTSTVMWE QQFVFDTNIIDHQSKGKLFKEFMGIGNHKQFSKKTIEDIDISKPTILDFNNKNIIDKC IFQYKNVDKILSKPNMLNKMGCYLEEYGPQICAASEETWETLKLICNMSYWSAIKDFS TLMKNMLAVSQYNRHNTFRVVTCANNNLFAIVMPSSDIKTKRATLAYFIICIHDHKDD IMHHGALHATFRSEGKYVSVSKGIRLDKERCQRIVSSPGLFLLTTLLMYNNNPTIKIE DVANFAFHTSLSITKAMLSLTEPSRYMIMNSLAISSHVKDYIAEKFSPYTKTSFSVIM ANLIKKGCYNAYKQRSKVDLRSIHLTDYEITQKGVNNNRDLSSIWFEGKVSLKEYINQ IYMPFYFNSKGLHEKHHVMIDLAKTVLEIEHDQRLNIPGIWSNTPQKQTVNLPVLIYA ISKNLLMDTSRHNYIRSRIENSNNLKRSITTISTFTSSKSCIKVGDFTDFKSRESRIV NAKLEKDIRKYTIANPEFIEDLTEKATIRHAIYDDLKKAIPDYIDVMSTKVFDALYYK IKHGEITDRPAVEHILQVMKDHKRFVFTYFNKGQKTAKDREIFVGEFEAKMCLYLVER ISKERCKLNPDEMISEPGDSKLKKLEDMAEYEIRYTANTLKSMKDKALQEFSRFADDF NFKPHSTKIEINADMSKWSAQDVLFKYFWLFALDPALYKPEKERILYFLCNYMDKVLV IPDDVMTSILDQRVKREQDIIYEMTNGLKQNWVSIKRNWLQGNLNYTSSYLHSCCMNV YKDIIKNVALLLEGDVLVNSMVHSDDNHTSITMIQDKLSDDIIIEYCIKLFEKICLSF GNQANMKKTYVTNFIKEFVSLFNIYGEPFSVYGRFLLTAVGDCAFLGPYEDTASRLSA TQTAIKHGAQPSVAWVAIALTQWITHSTYNMLPGQNNDPLNVLTSQNRFDIPIELCGL LNTDLPTLAIAGLEAGNLTYLVNLSRRMSKVQLLRESIQSQYADIESWDLSKLTQMDK FKLKLLRFMTLDSAMSSDDGMGETSDMRSRSLLTPRKFTTHASLVRLESYNDFQKLVQ DQSQIDDLFEFFIRMPQLLVTKGETTEEFMKSILFRYNSRKFKESLSIQNPAQLFIEQ VLFANKPMIDYTSIHDRLFGIQDDPNIDDCTMIIGKKTFIETYRQIQIDLNKFEITNQ DVKTIYAFCLMNDPILVACANNILLSMHGLQMNRNGMTCCMMPEIKSLKVIYHSPALV LRAYVQENNNIKGAEPDEMQRDLYHLEEFIAKTKLRESMQARIAKNELKTMGRDFKFE IQELTKFYQICYDYIKSTEHKIKIFILPKRAYTPIDFCGMITGNTLKDQCWFTIHYLK QITVPARKAQIATSLDLEIQIAYEALRLIAHFADTFIAENSRVPFLKQVISNFLYKGI QMQVLYNKIKASRLRTKILPILFYMGDLEQLDVDRYDAEKAEEQITWNNWQVSREFTT GPIDLSIKGYGRSIRIIGEDTRLTAAELQINRMRNDIISRHGQSLLNKPHGLRFEKMD EVEFLDDKLHYIVYQLRDRKRYYYNILSTNAIYEHNDRLSQTRSRRNNRWIPVCPVAI SKYVNTDRPILDRIEMLNIDNTKLTSLQVAVSDTAMVRKAALAKMSFFEGPPIQCGGI DLSKLMQNQTIINLDINKISSISLLDLCRIFSCRGYSNDQDAFEFLSDEVMNEDISEE LDSSPVLKITYTKKSNSQNTFKNAIVKALVRECDRFEEIFDLSDDGFTSDTNLELLEN LVWILNHLKTNQWSTELMECIHMCLYRNEMDHIYHNFQIPDVFVTNPIELSIKWLDVI EFLEMILAHDFKSEPWISIMNHSITKAIDYSRLEHKKTSAQANISKFIKGKKMGGRSK FDF" /product="RNA-dependent RNA polymerase" /note="pol" misc_feature 1802..4039 /db_xref="CDD:282102" /note="Bunyavirus RNA dependent RNA polymerase; Region: Bunya_RdRp; pfam04196" misc_feature 44..346 /db_xref="CDD:317864" /note="L protein N-terminus; Region: L_protein_N; pfam15518" ORIGIN 1 tagtgtaccc ctaaatacaa catacaacat ggacaattac aagatcaatc aatatcgtgc 61 taggattaac gatgcgaatg atccagaaac tgctaaagat atattagctg atctattaat 121 ggatcgacat aactactttg gcagagaact ctgttactat cttgacattg agtataaaaa 181 tgacacgcca attgatgata ttctcctgga tttcttacca ccagggactg atttcaaggc 241 tagatactgt acacctgaca attatataat tcacaacaga aagttatatg tattggatta 301 caaggttgct gtcgataatg aatcttcagc taagactttt gaaaagtatg acaagatatt 361 tggcgatgtt ttggtgccat tgggcctgga ctatgagata gttgttgtta gggcagaccc 421 ggtgcgagat gtaatacatg tcaattcgga agacttcctt aatgagttcg ggccgattaa 481 tatgaactta gattttactt ggttttacaa tcttcgtgca ttaatatatg ataagtttaa 541 agacgatgaa cgctttttag aaatagccag ccagggtgaa tttacaatga ctgggccatg 601 gcttgatgac gaaacaccag aattatatga tcatcctata ttcaaagagt tttatgattc 661 tctaccaaat gagtcaaaaa ttacctttca gcggtcaatg aacttcgatg caacaaaagg 721 tgacaaatgg aatcaaaacc tggttgatac aattcatgaa tatactccaa gttataatct 781 ctttataaaa aatgcctcat ctggcatttt taaatgtcat ggagattacc cgaaacctag 841 caattctgaa atcacacaag gttggcaatt aatgacagag agaataacta gtgaaagaga 901 actaactaat gacataaata aacaaaagcc ttctgtccac ttcctctggt gtccaccaag 961 tgaagagtcc aatgaaaata tcaaaaagtt gttgcgatta tccaaaatgc ttcaaaagtt 1021 ggatggcacc agcacatatt tagacgcatt taaagccatt ggtatcctga tggatttctc 1081 atcaaatgtt ggattgtatg aatcacatac aagcaagcta aagaatatgt caaggcaaac 1141 atcaaaaaag atagacaaga agattgaagc tataaaaatc ggtacatcaa ctgtaatgtg 1201 ggagcagcaa tttgtcttcg atacaaacat cattgatcac cagtcgaagg ggaaactctt 1261 caaagaattc atgggaattg gcaaccataa gcaattttca aagaagacaa ttgaagacat 1321 tgacatctca aagccaacta tattagattt caataacaaa aacataattg acaaatgtat 1381 attccaatac aaaaatgttg acaagatatt atcaaagcca aatatgctaa acaagatggg 1441 atgttatctt gaagaatatg gcccacaaat ttgcgcagca tcagaagaaa catgggaaac 1501 acttaagctt atatgcaaca tgtcatattg gtcagcaata aaagatttct cgacattaat 1561 gaaaaacatg ctggcagtgt cgcagtacaa taggcacaac acattccggg tagtaacttg 1621 tgcaaataac aatttatttg ccattgttat gccatcttca gatattaaga caaagagggc 1681 aacgttggca tactttataa tatgtattca cgatcataaa gatgacatca tgcatcatgg 1741 agctttacat gcaacattta gaagtgaagg gaaatatgta agtgtctcaa aagggatcag 1801 attggataaa gagagatgcc aaaggatagt ttcttcccct ggactattct tattaacaac 1861 actgctgatg tataacaata acccaacgat taagattgag gatgttgcaa attttgcttt 1921 ccatacatct ctatctatta cgaaagctat gttatcctta actgagccat ctagatatat 1981 gataatgaat tcacttgcta tctctagcca tgtcaaagat tacatagcag agaaattctc 2041 accatataca aaaacaagct tctcagtgat tatggctaat ctgataaaaa aaggctgtta 2101 caacgcatat aagcagagat caaaagttga tctcagaagc atacatctaa cagactacga 2161 aataactcag aaaggtgtca acaataaccg tgatttatca tccatttggt ttgagggtaa 2221 agtgtcattg aaagaatata taaaccagat ttacatgccc ttttacttta attcaaaagg 2281 attgcatgaa aagcaccatg ttatgattga tcttgcaaaa acagtactag agatagagca 2341 tgatcaacgc ctcaatatac ctggtatatg gtctaatact cctcagaaac aaacagtgaa 2401 tctgcctgtt ttgatatatg ctatttcaaa aaacctctta atggatacct ctagacataa 2461 ttatattcgg tctagaatag aaaactcaaa caatttaaag cgatctatca ctactatcag 2521 tacttttact agttcaaaat catgcattaa ggtcggtgac tttacagatt tcaagtcaag 2581 agaatcaagg attgtcaatg ctaaactaga gaaagatatc aggaagtaca caatagcaaa 2641 cccagaattc attgaagacc tgactgaaaa ggccactata aggcatgcta tttatgacga 2701 cttaaaaaaa gctataccag attatattga tgtaatgtct actaaagtat ttgacgcatt 2761 gtattataag atcaagcatg gtgaaataac agacagacca gccgttgaac atatactcca 2821 agtcatgaaa gatcataaga gatttgtctt tacatatttc aataaaggac agaaaacagc 2881 aaaagacaga gaaatatttg tgggagagtt tgaagccaaa atgtgcttat acttagtaga 2941 gaggatatcc aaagagaggt gtaaactcaa cccagatgag atgattagcg agcctggaga 3001 tagcaagtta aaaaagcttg aagacatggc tgaatatgag attcggtata ctgctaacac 3061 attaaaatcc atgaaagaca aggcactgca agaatttagt agatttgcag acgacttcaa 3121 ttttaagcca cactcaacaa aaatagagat aaatgcagac atgtcaaaat ggagtgcaca 3181 ggatgttctc ttcaagtatt tttggttatt tgctcttgac cctgcacttt ataaaccgga 3241 gaaagaaagg attttatact tcttatgcaa ctacatggac aaagtactag ttatccctga 3301 tgatgtgatg acgtcgatat tagatcaacg tgtaaaacga gaacaggaca tcatatacga 3361 aatgacaaat gggctaaaac aaaactgggt ttctattaaa cgaaactggc ttcagggcaa 3421 tctaaattac acatctagct acttacattc ctgttgtatg aatgtctaca aagacattat 3481 caagaatgta gctctgctcc tagaaggaga cgttttagta aactcaatgg ttcattcaga 3541 tgataaccac acttcaataa caatgattca agacaaactc tcggacgata tcattattga 3601 atactgcatt aaattatttg aaaagatatg cctatctttt ggaaaccagg ccaacatgaa 3661 gaaaacttat gttacaaatt tcatcaaaga atttgtttct ctcttcaata tctatggaga 3721 accgttctca gtatatggtc ggtttctgct tactgcagta ggtgattgtg cattcctcgg 3781 cccgtatgag gatacagcaa gcaggttatc tgctactcaa actgcaatca aacatggtgc 3841 tcaaccatct gttgcttggg ttgcaattgc acttactcag tggataacac atagtactta 3901 taacatgcta cctggacaaa acaatgaccc actgaatgtt ttaacttcgc aaaacagatt 3961 tgacatacct atagaacttt gtggattatt aaatacagat ttgccgacat tggcaatagc 4021 aggcttagaa gcaggcaatt taacttattt ggtcaatttg tctagaagga tgtccaaagt 4081 ccagctactg cgcgaaagca ttcaatctca atatgcagac atagaatctt gggatttaag 4141 taagttgacg cagatggata aatttaaact taagttgttg aggttcatga cattagattc 4201 agctatgagt agcgacgacg gcatgggaga gactagtgat atgcgttctc ggtctctgtt 4261 aacgccacgg aaatttacaa cacatgcgtc tttagttagg ttagaatctt acaatgattt 4321 ccagaaactg gtacaggacc aaagtcaaat agatgactta ttcgaattct ttattaggat 4381 gccgcaattg ttggttacta aaggggagac aactgaagag tttatgaaat caatcttgtt 4441 caggtacaat agcaggaaat tcaaagaatc cttatcaata caaaacccag cacagctttt 4501 tatagaacaa gtgttatttg caaacaagcc catgattgac tatactagca tacatgacag 4561 actttttggc atacaagatg atcctaatat agacgactgt acgatgataa tagggaagaa 4621 gacctttatt gagacgtatc ggcagataca aatagatctt aataaatttg agatcactaa 4681 tcaagatgtc aagaccattt atgcattctg tctaatgaat gatcccatac tagtagcatg 4741 tgctaacaat attttgctat ctatgcatgg tctgcaaatg aatcgtaacg gaatgacatg 4801 ttgtatgatg ccagaaataa aatctctaaa ggtgatatat cattcgccgg ctctagtact 4861 acgagcatat gtacaagaaa ataataatat caagggagct gaacctgatg aaatgcagcg 4921 tgatctgtac catctagagg agttcattgc caaaactaaa cttcgtgaaa gtatgcaagc 4981 tagaattgca aaaaacgaac ttaaaactat gggtagagac tttaaatttg agatccaaga 5041 attgacaaaa ttttatcaga tatgttatga ttatataaaa tctactgaac ataaaatcaa 5101 aatattcatc ttacctaaac gagcttacac tccaattgac ttctgtggca tgattacagg 5161 taacacatta aaagatcaat gctggtttac tatacattat ttaaagcaga ttacggtacc 5221 agcaaggaaa gcccagatag caacatcgtt agacttagag atacaaatag cctatgaagc 5281 attgagatta attgcacatt ttgcagacac atttattgct gaaaattcaa gagttccgtt 5341 cctcaagcaa gtcatatcaa atttcttata taaaggtatt caaatgcaag tgctatacaa 5401 taagataaaa gcctcccgac ttaggacaaa aatattacca attctgtttt acatgggcga 5461 tttggaacag cttgatgtag acaggtatga tgcagaaaaa gcagaagagc agataacatg 5521 gaataattgg caagtatcta gagaatttac aacgggacca attgacttgt caataaaagg 5581 atatgggaga tctataagaa ttatagggga agatacacga ctaactgcag ctgagctaca 5641 aattaaccgc atgagaaatg atataatatc aaggcatgga cagtcgctgt tgaacaagcc 5701 acatggtcta agatttgaaa aaatggatga ggtagaattt ttggatgata aactgcatta 5761 tattgtctat cagttaaggg acagaaaacg ctattattat aatatattgt ctacaaatgc 5821 tatatatgaa cataatgaca gattgagcca aacaaggtca agaagaaaca atcgatggat 5881 acctgtctgt ccggtagcaa tatcgaagta tgtcaataca gatagaccta tattagatag 5941 aatagaaatg ctcaatattg ataatactaa gctaactagt ctgcaagtgg ctgttagcga 6001 tactgcaatg gttagaaagg cagcacttgc aaaaatgtct ttttttgaag gtccacctat 6061 acagtgtggg ggtatagatc tttcaaaatt gatgcaaaac cagaccatca taaacttaga 6121 tatcaacaag atttcatcaa taagtctatt agacctttgt agaattttct catgtagagg 6181 ctattcaaat gatcaagatg catttgagtt cttatctgat gaagttatga atgaagacat 6241 atctgaagaa ttagacagtt caccagtttt aaaaattaca tatacaaaaa agtcaaattc 6301 acaaaacaca tttaagaatg ctatagtaaa ggctttagta cgtgaatgtg acagattcga 6361 agagatattt gatctttcag atgacgggtt tacctcagat actaatttgg aactgttaga 6421 gaatctagtc tggatactaa accacttaaa gaccaaccag tggtctacag aattgatgga 6481 atgcattcac atgtgcttat acagaaatga aatggaccat atataccaca acttccaaat 6541 accagatgtg tttgtaacaa acccaattga gctgagtatt aaatggttgg atgtaataga 6601 attcctagaa atgatccttg cccatgactt taagtctgaa ccctggatat caataatgaa 6661 ccactctatc acaaaagcta ttgattactc gcggttagaa cataaaaaga cgagtgcaca 6721 agcaaatata tccaaattca taaaggggaa gaaaatgggt ggtcgatcaa aatttgattt 6781 ttaagtgaat tggtagagat cagtacgatt tttattgaca aagtgtgttt agaataagta 6841 tattattgca tttaggggc //