LOCUS HM119401 6418 bp RNA linear VRL 02-APR-2011 DEFINITION Alenquer virus segment L, complete sequence. ACCESSION HM119401 VERSION HM119401.1 KEYWORDS . SOURCE Alenquer virus ORGANISM Alenquer virus Viruses; ssRNA viruses; ssRNA negative-strand viruses; Bunyavirales; Phenuiviridae; Phlebovirus. REFERENCE 1 (bases 1 to 6418) AUTHORS Palacios,G., Tesh,R., Travassos da Rosa,A., Savji,N., Sze,W., Jain,K., Serge,R., Guzman,H., Guevara,C., Nunes,M.R., Nunes-Neto,J.P., Kochel,T., Hutchison,S., Vasconcelos,P.F. and Lipkin,W.I. TITLE Characterization of the candiru antigenic complex (bunyaviridae: phlebovirus), a highly diverse and reassorting group of viruses affecting humans in tropical america JOURNAL J. Virol. 85 (8), 3811-3820 (2011) PUBMED 21289119 REFERENCE 2 (bases 1 to 6418) AUTHORS Palacios,G., Savji,N., Sze,W. and Lipkin,W.I. TITLE Direct Submission JOURNAL Submitted (14-APR-2010) Center for Infection and Immunity, 722 West 168th Street, New York City, NY 10032, USA FEATURES Location/Qualifiers source 1..6418 /mol_type="genomic RNA" /country="Brazil" /segment="L" /collection_date="1976" /host="Homo sapiens" /db_xref="taxon:629726" /organism="Alenquer virus" CDS 23..6289 /codon_start=1 /protein_id="AEA30054.1" /translation="MEEILRKQIIPVQKGLNKPELIQYDDSIVDVEIPFFHISKCNGF MKIDLDLNNGVDYSTIGSSLSSTIEVPDKNLPNLIHDIVFSHLSDKTDTTFSSMFGVK QDTYDHLSPDVIIKTAAGAYFVVEFTTNRGGERASFNSCKDKFSKYHIPCENRAVGCL VSLFVISVYAQGVWSNLALNDEDVNELVFRFRLAVAIMEEAKKYYPELSGDESELSKQ EREILGVVSSIQMDWETTTAQFPFFKEKVFENFLQEPADEEYLSSIISRELQESQKGL IQGAFYKEGLRQDERLSLNFQECELKIDEYLSNEDNNLRNIKESKSTIQIPPWVMTNH TPGKSVSELSNVVILGDHPMCKIWRSLVISASLGEISRSEDDPNLEFEKALEGSIEKS DERSKYHRVKLRLESEETIYAACLGVEGKTYKANSQVETARERSKKPFSINHDTSALQ NFLLVNEPYLFEEQYDSFNPFSIDYELRQCAQKIHQPELINMKGENEFLENHRKFVAC NLGSWCQMVSLIGAELSASVKQHVGPGQFVIKRLLNSALYLLIKPTSSVSHIFVSFGL LKSNHIGDLWNDGVFKHYIDAGDMFITDFVSYKLSKLTNLCKCFPLIESAACFWTELF GFEPWRAVDILSTDRSGSGKEASSMLKLTLLTLLEDKATTEEIQTMQRYIVMEGFVSS PEVPKPHKMLGKLPKVMRSELQVFLTNRVLDAMRKISQNPFRLQKKQGQISWTGLFNP ITGSDLKDVQPLISICYNGYFKNKEEETEPSALSRLYKKIIELEHLCPQNDEYLGLGD PNEPKMHEFSRSFLKKCTDHSKTILRKVYGHNFMSQIDSQITREISSITLERLATLKA SSNFDESWYCYNDCSKKEYHREKAIVKMSKFAGSGKTLAIEVFDNCMKLIEKRGNMHI CLFKKQQHGGDREIYVLGAEERIVQSIIEAISRSIGRFFPSDTLCNPNNKMKIPESHG IRARKHCRGPVWTCSTSDDARKWNQGHFVTKFALMLCEFTHQKWWPIIIRGCSMFTNK FMMMNLRYIDILSRHHELKVDDEFSDTIFRAYHGEVKVPWMDAGCTFLKTKTGMMQGI LHYTSSLLHTIYQEFTRSLTFKIFNMKVSPDMSQMIVCDVMQGSDDSSMMISFPCDNE EKFTKCKIAASISFRMKKRLGVYLGIYPSEKSTSNTDFVMEYNSEFFFHSQHVRPTIR WVAACCNLPEVETLVARQEEASNLMTSVSEGGGSFSLSNCIQHSQCTLHYMLIGMGVS SLFEQFKKAILKWKDPGLGFFLLDNPYCSGLGGFRFNLYKAISTTSLKKLYSYFMKKV RLESDESQGLVTESCSVSPGGAIVLSSALKWGSKQKFYKLRDKLNIPEDWIERINDNP SVLYRAPRTGDEVVLRIAEKVHSPGVVSSLSTGNAVAKVIASSVYFLSAAIFQDSGKQ EYSIVEDSKYSLLQKLYALEGKTLQNSISDSDMLFLFPNVEDLKSLDSLVFNRGNVEL TRRKHNKENTQSRIIVFEGNRNLRTPAEYLISDKWFGTQKSKIGKTAFDQEWDKVTTI IPWLEDNPEQTLNNSPLSNHVQIRNFFSRMDQKPRVVRVTGAPIKKRSGISKLSMVIR DNFSKLGFLKDIEDVSGTSRTNTAEILKHFMFCALQGPYDQNKKEQLVYKILHLSDPL GIRDSDGKSRSNILAIFQNYVYGDTHIAEQIEKAGAGTIGGFIIPQKSKKIEDSVYYY GHGVWRGVMDGKQVQIELNNSVGNPPMITSITLENGAEPWQVSKSVRMWAEDIGAKNN LDFSKNSGKGCKYWMFDFKMFSEDKPYGAPVFLSNRRMVDFREMDNEEIKLKVRKSTI NLYVNSSGRDVHILSYTAGDNDLSSACLRISSEMKDSMLALFPREPSKSWASCASIPH FIVHRVLDVVRGNLYVEHLDPTRLAEILKLCCESSLRTRVGTIFSPIPALGDSRCHVD IDDLIDIVITDIRDSDFKSVVKTMEEDLRGGYEQEDFDFSDIDLFGPAHFKELSDLST ISHPLLDDYIDYCISSMGRKEVRRLLEQSRCKSKDLKISEDLFTCLQRPLRSIEVDDF GLNEGEFVSDNMIG" /product="L protein" ORIGIN 1 gaaacacaaa gaagcccaaa caatggaaga aatcttaaga aaacaaataa tcccagttca 61 gaaaggccta aacaagcctg agcttattca gtatgacgac tcaattgttg atgttgagat 121 cccattcttc catatttcca agtgcaacgg ttttatgaag attgacttgg atttgaacaa 181 tggagttgat tactcaacaa ttggatcgtc attgtcttcc actatagaag tgccagataa 241 aaatcttccc aatctgatac atgatatagt tttctcacac ttaagtgata aaacagatac 301 aaccttttcc agcatgttcg gtgttaagca agatacatat gatcacttat ctcctgatgt 361 gatcatcaaa actgcagcag gggcatattt tgttgttgag ttcacaacta acagaggggg 421 tgagagagct tcttttaact catgcaaaga caaattttcc aaatatcaca ttccgtgtga 481 aaacagagct gtagggtgcc tggttagttt atttgtcatt tctgtttatg cacagggggt 541 gtggtcgaac ctcgctctta atgatgagga cgtcaatgag ctagtattta gatttcgatt 601 agctgtggct atcatggaag aagctaagaa gtattaccct gagctgagcg gggatgaatc 661 agaattgtct aaacaagaac gagagattct tggagttgtt tcttcaatac aaatggattg 721 ggaaacaacc acagctcaat tcccgttttt taaagaaaaa gtatttgaga atttcttgca 781 ggagccagca gatgaggaat atctatcctc catcatttca agagaattac aagaatctca 841 gaagggtcta atacaaggag cattttataa ggagggtcta cgtcaggatg agagattaag 901 tttaaacttt caagagtgtg aactcaaaat tgatgaatac ttatcaaatg aggataacaa 961 cctcagaaat ataaaagagt caaagtccac aattcaaata ccaccatggg tcatgaccaa 1021 ccacacacct gggaagtcag tgtcagagct ctctaatgtg gtgattctgg gagatcaccc 1081 catgtgtaaa atttggagat ctctggtgat cagtgcatct ctaggggaga ttagcaggtc 1141 tgaagatgac ccaaacctag aatttgaaaa agccctagaa gggtctatcg agaagagtga 1201 tgagagaagc aaataccata gagtgaaatt gaggctggaa tcagaagaga caatatatgc 1261 tgcttgctta ggagtagagg gcaaaactta caaagccaat tctcaagtag agacagctag 1321 agagagatca aaaaaacctt tttccataaa tcatgacact tcagccctcc agaatttttt 1381 attggtcaat gaaccttatc tctttgagga gcagtatgat tctttcaatc cattttctat 1441 agattatgaa cttaggcagt gtgctcagaa gattcaccag ccagagctga taaatatgaa 1501 aggtgagaat gagtttttgg agaatcaccg caagtttgta gcttgtaatt tagggtcatg 1561 gtgtcaaatg gtgtccttaa ttggagcaga attatctgct tcagtgaaac agcatgtggg 1621 cccaggacaa tttgtcataa agaggctgct gaactcagca ttatacttat tgataaaacc 1681 gacgtcttca gttagtcaca tatttgtgtc ttttggattg ctcaaaagca atcatatagg 1741 agacttgtgg aatgatggag tgttcaagca ctatatagat gctggagata tgttcataac 1801 agattttgtt tcatataagc tgagtaaact gaccaatctc tgtaagtgct ttcctttgat 1861 agagagtgct gcctgctttt ggacagagct gtttgggttt gaaccttgga gagcagtgga 1921 catattgagc actgacagaa gtggcagtgg aaaagaagct tcatccatgc tcaaattaac 1981 tcttctgact cttcttgagg ataaggccac caccgaagag atacaaacaa tgcagaggta 2041 tatagtgatg gaggggtttg tctctagccc agaggtgcca aagcctcata aaatgctagg 2101 gaagctaccc aaagttatga ggtcagaact ccaagtgttc ttaactaata gagttttaga 2161 tgccatgagg aagatatcac aaaatccatt cagattgcag aagaaacaag gccaaatttc 2221 atggactgga ttgtttaacc ctataacagg aagtgatctt aaggatgtgc aaccactaat 2281 aagcatttgt tacaacggct atttcaagaa taaagaagaa gaaactgagc catccgcact 2341 atcaaggctt tacaaaaaga tcatagaatt agaacacttg tgtcctcaga atgatgaata 2401 tctaggacta ggtgacccta atgaacccaa gatgcatgag ttcagcagat cttttctaaa 2461 aaaatgcact gatcatagca agaccatact tagaaaggtg tacggccaca attttatgag 2521 ccagatagac agtcaaataa ctcgcgagat atcctcaata accttagaga ggctagcgac 2581 tctaaaagct agtagcaatt ttgatgaaag ttggtattgt tacaatgact gctcgaaaaa 2641 ggaataccat agggaaaagg caatagtcaa aatgtctaaa tttgctgggt caggtaaaac 2701 actagccatt gaagtttttg ataattgcat gaagttgata gagaagagag gaaacatgca 2761 tatatgctta ttcaagaagc agcaacatgg gggtgataga gaaatctatg tgttgggagc 2821 agaagaaagg atagtgcaat ccatcataga agctatatcg cgatctatag gtaggttctt 2881 cccttccgac actctgtgta atcccaataa taagatgaag atacctgaga gccacgggat 2941 cagagcaaga aaacactgca gaggccccgt ttggacttgt tcaacctcag atgatgctag 3001 aaaatggaat caggggcact tcgtaacaaa gtttgctctc atgctatgcg aattcacaca 3061 ccaaaaatgg tggcctatca taataagagg gtgcagcatg ttcacaaaca agttcatgat 3121 gatgaacctg agatacattg atattcttag tagacaccat gagcttaaag ttgatgatga 3181 attctctgac acaattttta gagcatatca tggagaagtt aaagtgccat ggatggatgc 3241 tgggtgcaca ttcctcaaga ccaagacagg catgatgcag ggaatattgc attacacatc 3301 atcactatta cacacaatct atcaagaatt cacgagatca ctgacattca agatcttcaa 3361 tatgaaggta agcccagaca tgtcacaaat gatagtctgc gatgtcatgc agggttctga 3421 tgacagcagc atgatgataa gttttccttg tgataatgag gagaaattca ctaaatgtaa 3481 gatagcagct tccattagtt tcagaatgaa aaaaagactt ggtgtttatc ttggaatata 3541 tccctctgag aagtcaacat caaacacaga ctttgtgatg gaatacaact cagaattttt 3601 cttccactct caacatgtta ggccaaccat aagatgggtg gcagcatgtt gcaacttgcc 3661 cgaagtagag acattggtcg ctagacaaga ggaagcttcc aacctgatga cttctgtatc 3721 agaaggtgga ggatccttct cattatccaa ctgcatacaa cacagccaat gtacattaca 3781 ttatatgttg attggtatgg gagtaagttc tttgtttgaa cagttcaaaa aagccattct 3841 aaaatggaag gacccaggat taggcttctt tttacttgat aatccatatt gttcaggttt 3901 aggagggttt aggttcaatc tttataaagc gatatcaaca acctcactga aaaagctcta 3961 ctcatatttt atgaaaaaag ttagactaga gtcagatgaa agtcaggggt tggttactga 4021 aagctgctct gtaagtcctg ggggtgccat agttctgagt tctgcactca agtggggttc 4081 aaaacaaaag ttttacaagt taagagataa actgaacatt ccagaggact ggattgaaag 4141 aattaatgat aatccatctg tcctttatag agcacctaga acaggagacg aagttgttct 4201 tagaatagca gaaaaggtac atagcccagg agtggtttcc tctctatcca ctggcaatgc 4261 agtggcaaaa gtcatagcct catctgtgta tttcctcagt gctgctatct ttcaagattc 4321 tggaaagcaa gaatattcta ttgttgaaga cagcaagtat agcttactac aaaaactata 4381 tgccctagaa gggaaaactt tacagaactc gattagtgat tctgatatgt tgttcttatt 4441 tcctaatgta gaggacctga aatccctaga tagcttagtt tttaacagag gaaatgttga 4501 gttgacaaga agaaagcata ataaagaaaa tacacagtct aggatcatag tgtttgaagg 4561 aaacagaaac ttaagaactc ctgctgaata tttgatatct gataagtggt ttgggacaca 4621 gaaaagcaaa attggtaaaa cagcatttga ccaagaatgg gacaaggtga caactataat 4681 accttggctt gaggacaacc ctgagcagac tttaaacaac tctcctctct ccaatcatgt 4741 tcaaataaga aacttttttt ctagaatgga tcaaaaaccc agggtagtcc gtgtcacagg 4801 agctccaata aagaagagat ccggaattag taagttgtca atggtgattc gagacaattt 4861 ctcaaagctg ggcttcctga aagatataga agatgtgtca ggaacaagca gaaccaacac 4921 tgcagagata ctgaaacact tcatgttttg tgcactacaa ggaccctatg atcagaataa 4981 aaaagaacaa ctagtctata agatactgca tctgtctgac ccactgggaa ttcgagattc 5041 tgatggaaaa tcaaggtcta atatactggc cattttccaa aattatgtgt atggagacac 5101 ccatatagct gagcagatag agaaggctgg agctggcaca ataggaggat tcatcatccc 5161 tcagaaaagt aagaaaatag aagactccgt ttattactat ggtcatggag tgtggagagg 5221 tgtcatggat ggtaaacaag tgcagattga actgaacaac tccgttggaa atcctccaat 5281 gataacatcc atcactctag aaaatggagc agaaccttgg caggtatcta agagtgtgag 5341 aatgtgggca gaggacattg gtgcaaaaaa caacttggat ttttcaaaaa attcagggaa 5401 aggatgcaaa tattggatgt ttgactttaa gatgttcagt gaggataagc catatggggc 5461 ccctgtattc ctatctaata ggagaatggt cgattttaga gaaatggata atgaagagat 5521 taagctgaaa gtgaggaaat ccactatcaa cctttatgta aactcaagtg ggagagatgt 5581 tcacattcta tcctacactg caggtgacaa tgacctcagt agcgcatgtt taaggatttc 5641 tagtgagatg aaggactcaa tgcttgcctt atttccacga gaacctagca agtcatgggc 5701 atcctgtgct tccatcccac attttattgt ccacagagtc ttagatgtag tcagaggcaa 5761 cttgtatgtt gaacatctgg accccactag gctggcagaa atactgaaat tgtgctgtga 5821 gtcatcttta aggaccagag ttgggactat attctcgcct attccagcac tgggggatag 5881 cagatgtcat gttgacatag atgacctgat tgacatagtg atcacagaca taagagattc 5941 agattttaag tctgtcgtga agacgatgga ggaagattta agaggaggat atgaacagga 6001 agattttgat ttctcagaca tagatctttt tggtccagca cattttaagg agctgtctga 6061 tctttcaacc atcagccacc ctttgcttga tgactacatt gactattgca tctctagtat 6121 gggaaggaaa gaagtgagga ggttattaga acagtccaga tgcaagtcta aagacttaaa 6181 gatctcggaa gatttgttca cttgtctgca aaggccacta agatccattg aagttgatga 6241 ttttggtcta aatgagggag aatttgtatc agataatatg ataggttgaa ataacatgag 6301 agatcaaagt tgaggtgagg tacaaaaaac acaaagacca catggagaat tgtaccaatt 6361 gtgtaaatag agaatattaa ttaatgacag attattcaat taagggcggt ctttgtgt //