LOCUS HM119402 4286 bp RNA linear VRL 02-APR-2011 DEFINITION Alenquer virus segment M, complete sequence. ACCESSION HM119402 VERSION HM119402.1 KEYWORDS . SOURCE Alenquer virus ORGANISM Alenquer virus Viruses; ssRNA viruses; ssRNA negative-strand viruses; Bunyavirales; Phenuiviridae; Phlebovirus. REFERENCE 1 (bases 1 to 4286) AUTHORS Palacios,G., Tesh,R., Travassos da Rosa,A., Savji,N., Sze,W., Jain,K., Serge,R., Guzman,H., Guevara,C., Nunes,M.R., Nunes-Neto,J.P., Kochel,T., Hutchison,S., Vasconcelos,P.F. and Lipkin,W.I. TITLE Characterization of the candiru antigenic complex (bunyaviridae: phlebovirus), a highly diverse and reassorting group of viruses affecting humans in tropical america JOURNAL J. Virol. 85 (8), 3811-3820 (2011) PUBMED 21289119 REFERENCE 2 (bases 1 to 4286) AUTHORS Palacios,G., Savji,N., Sze,W. and Lipkin,W.I. TITLE Direct Submission JOURNAL Submitted (14-APR-2010) Center for Infection and Immunity, 722 West 168th Street, New York City, NY 10032, USA FEATURES Location/Qualifiers source 1..4286 /mol_type="genomic RNA" /country="Brazil" /segment="M" /collection_date="1976" /host="Homo sapiens" /db_xref="taxon:629726" /organism="Alenquer virus" CDS 20..4036 /codon_start=1 /protein_id="AEA30042.1" /translation="MKILFIIKRIAFALAAYTLTGWSMEGQTKICLSNESPLEGIVYY WEDLKRKRKKQVKGDSTNHLDCRIGEGDPMLMSNSSMMKMIEQVQLSITPLKLTCSGN LENSGVSVNFNGLDDTEPGYNIVDCDNFRVFSDLGIIVGDGKSWVEKYNASYDQKLLS ANQKVLDLESQLEDAKNVRLDDKNEIQSLIRENQMLLHKISNLTGIAYNTNNSLRALQ SELFSAKDHHKIIIDEKNKLSEENKRMREKLSMIEKSNTSKSNVSSVSSILKTAVLLT TTIPFLDIVELADASTHVALQNPYIHVKNRIGGGLYRFDSEDDATCKGLTYGLACAGF DYMIRPDKYPFFNSYVMHLTPLEAYAEGIVEKEGDSCEMGKSKDPKCLEGRQFIKASC PQGVNGVYYLNDKGKLSHSRCKEDEYEITEDCAFCRKMKKKGSKGVMKTSVSIQDAFC QKDAEEYSGPKITVQGICEIGTTVYKLCSNHAQHYENIPFVIFKNGGKIYLERLITKN LELIADVSFICYEHKGQDGTETETRELKRVKVGDCKNVNSSKSKHCTGDHVFCQKYGC SGSYPEVKCITAPGSGPVLVNILGSWVKPKCLGYEKVLVKREVKRSFVVPQAECETCI SSCEDDGIRVTSTGFKITSAVSCSHGSCVSTHQDPSTTIVVPYPGLSIASGGLIGVQL SHNDDSTSLHLVVNCPPRDVCETLHCFFCIRGIINYQCHTILSSLLLSSILSMMIYFL LFSIGKMLYFFKVIPKRLRSPFMWIFMLLCWLIQLVKKGLRSMSLRINNSIGWTNHAE LQEVINHRPIAQRRPIPRFQATMFILFSIFSLGLSCSETTLSNSKQTKCVQSGGNVKC TISATITMKAGIIGGESCFIIKGPMDNQQKTVRIKTVSSEIVCREGNSFWTSHYTPYC LSSRRCHLVGDCTGNRCQSWTDDLVSTEFKNSNDNLQMNENKCFEQCGAIGCGCFNIN PSCLFVHTVLKSVKPEAIRVFSCVDWVHRLTLLITGPDGEKEKVILSSMGTKFLSWGT VSLTLDAETISGTNSYSFLESSRGGFAIYDEAFSEVPREGFLGEIRCSSESAAVTAHS SCIRAPNLIKYKPMTDIIECTASLIDPFAAFVKGSLPQVRNGMTYTSSMDKKTVQAFN SGSIRALLTITMDDHEIEFLSNAEKCDATFINITGCYSCNYGARVCVRIKAQGNSNFL AVNEKESFYMSIGAWTGTRDYCQVMHFSTPEVDITTQYSCGGESRPLRVKGLLISLGV SDLRNNTGGSSVVVNPSETRWNLSGWLSGLTSWLGGTWAAVMKIILFLFFGFLMLIVL LLFLRSLGMSLFKKIKLT" /product="polyprotein" /note="contains G1, NSm, and G2 proteins" ORIGIN 1 acacaaagac ggctaagaaa tgaagatatt gtttattatt aaaagaattg cgtttgcctt 61 agcggcttac acattaacag gatggtcaat ggaaggccag acaaaaatat gcttgagcaa 121 tgaatcacct ctggaaggga tagtgtacta ttgggaggat ctaaaaagaa aaagaaaaaa 181 acaagttaag ggagattcta ccaatcactt ggactgcaga ataggtgaag gtgaccctat 241 gctaatgagt aattcttcca tgatgaagat gattgagcag gttcaattat caataacccc 301 cttgaaactc acttgttccg ggaacttaga aaacagtggt gtgtcagtca atttcaatgg 361 attggatgac actgagccag gctacaatat tgtagactgt gacaatttca gggttttttc 421 tgatttggga ataattgttg gtgatgggaa aagctgggta gaaaagtata atgcatctta 481 tgatcaaaag ctcctatctg caaaccagaa ggttttagat cttgaatcac aactagagga 541 tgccaaaaat gttagattgg atgacaagaa tgaaatacag tctctgatca gagaaaacca 601 gatgctcttg cacaaaatat ctaatttgac tggaattgca tacaatacca ataatagtct 661 tcgtgctttg cagtcagagc tgttttctgc caaagaccac cacaaaatca taattgatga 721 aaagaataaa ttgagtgaag agaataagag aatgagagag aagctgagca tgatagaaaa 781 aagcaacact agcaaatcaa atgtatcctc agtttcttca attctaaaaa cagcagtgtt 841 attgacaacc accattcctt ttcttgatat tgtggagctg gcagatgcct caactcatgt 901 tgcattgcag aatccatata tccatgtgaa gaacaggatt ggcggtgggc tgtataggtt 961 tgacagtgaa gatgatgcaa catgcaaagg gttgacttat gggctagctt gtgcaggatt 1021 tgactacatg ataagaccag acaaatatcc attctttaat tcctatgtca tgcacttgac 1081 accactagag gcatatgcag aagggattgt tgaaaaagaa ggggacagct gcgaaatggg 1141 aaagagcaaa gaccccaaat gcttggaagg caggcaattc attaaagcat cttgccctca 1201 aggggtcaat ggtgtgtatt accttaatga taaaggaaaa ctcagtcact ctagatgtaa 1261 agaagatgaa tatgaaataa cagaggactg tgctttttgt aggaaaatga agaagaaagg 1321 gtctaaggga gtgatgaaga catcagtgtc aatacaagat gctttctgtc aaaaggatgc 1381 agaagaatat tcaggaccaa agataactgt ccaaggaata tgtgaaatag gcacaacagt 1441 ttataagctg tgtagcaatc atgcccagca ttatgaaaac atcccatttg tcatttttaa 1501 aaatggagga aagatttacc tagaaagatt gataacaaag aacttagaat taatagctga 1561 tgtctcattc atttgttatg aacacaaggg acaagatggt actgaaacag aaaccagaga 1621 gttaaaaaga gtcaaggttg gggattgtaa aaatgttaat tcttctaaat ctaagcattg 1681 tactggagac catgtgtttt gccagaagta tggttgctca ggatcctatc cagaggtcaa 1741 gtgtataact gcaccaggct caggaccagt gctggtaaat atattaggct cttgggtcaa 1801 acccaagtgt cttggatatg agaaagtcct ggtaaagaga gaagtaaaaa gatcatttgt 1861 ggtgccacag gcagagtgtg agacttgcat aagctcttgt gaagatgatg gaattagagt 1921 tacctcaacc gggttcaaga taacgtcagc agtctcatgt agccatggat catgtgtctc 1981 cactcatcag gacccatcaa ccacgatagt ggttccatat ccaggactgt ccattgcatc 2041 cggaggtttg attggtgttc agctgtctca caacgatgat agcactagct tgcacttagt 2101 tgttaattgt cctcctaggg atgtctgtga gactctgcac tgtttctttt gcattagagg 2161 aatcataaat taccaatgcc acaccatctt gtcatcatta ttgctgtcat ccattctctc 2221 aatgatgatt tacttcttgt tgttctctat aggaaagatg ttatacttct tcaaagtcat 2281 tcctaagaga ctgcgcagcc cttttatgtg gatatttatg ctactctgtt ggttaatcca 2341 gctggtaaag aaagggttga gatcaatgag cctcagaata aacaattcca ttgggtggac 2401 caatcatgca gaattgcaag aggtgattaa tcacaggccc atcgctcaga gacgacccat 2461 ccctagattc caggccacta tgttcatcct attctctatt ttttccttag ggctttcttg 2521 ctcagaaacc accctttcca attcaaaaca gacaaagtgt gttcagtcag gagggaatgt 2581 gaagtgcaca ataagtgcaa ccattactat gaaggctggt attataggag gggaatcttg 2641 ttttataatc aaagggccaa tggacaacca acagaagact gtaagaataa aaactgtttc 2701 aagtgaaatc gtgtgtagag aaggaaatag cttctggaca agccattata ccccatactg 2761 tctgagctct agaaggtgcc acctggttgg tgattgcact ggaaatagat gtcaaagctg 2821 gactgatgat ttggtgtcaa ctgaattcaa aaattcgaat gacaacctgc aaatgaatga 2881 aaataagtgt tttgagcagt gtggcgcgat aggctgtggc tgtttcaaca taaatccctc 2941 ttgtttgttt gtgcacactg ttctaaagag tgtcaaacct gaggctataa gggttttctc 3001 ttgtgttgac tgggttcata gattgacatt actcatcact ggtccagatg gggaaaagga 3061 gaaagtcatt ttatcctcta tggggacaaa gtttcttagc tggggtacag tatctttaac 3121 actagatgca gaaacaattt caggaactaa ctcctacagt tttttagaga gcagtagagg 3181 tggattcgcc atctatgatg aggcattttc tgaggttccg agagaagggt tcctgggaga 3241 gattaggtgc tcatctgaat cagcagctgt aactgcacac tcttcatgta ttagagcccc 3301 aaatttaata aaatataaac ccatgactga catcattgaa tgtactgctt cgctcattga 3361 tccgtttgca gcctttgtta agggttcttt gcctcaggtg aggaatggaa tgacatacac 3421 aagctcaatg gacaaaaaaa ccgtccaagc tttcaatagt gggtcaatca gagctttact 3481 gaccatcact atggatgatc atgaaattga atttctatca aatgctgaga aatgtgatgc 3541 gactttcata aatataactg gttgctactc atgcaattat ggagcccgag tgtgtgtaag 3601 aataaaagct caaggaaact ccaattttct agctgttaat gagaaagaat cattttatat 3661 gtcaatagga gcatggacag ggacaagaga ttactgtcaa gtgatgcatt tttcaacacc 3721 agaagtagac attaccacac aatactcttg tggaggtgag agtagaccac tcagagtgaa 3781 gggtttgcta atatcattag gagtgtctga tctgagaaat aatacaggag gatcatcagt 3841 ggtggtcaac ccttctgaga caagatggaa cctatctgga tggctaagtg ggctgacatc 3901 ttggctagga gggacttggg cagcggttat gaaaataatt ctttttttat tttttggctt 3961 tttgatgcta attgtgctat tgttattctt aagatcttta ggaatgtcat tgttcaaaaa 4021 gatcaagctt acttagaagc ttgaaattca aatctcttac taaaatcaac agagtaatct 4081 ctcatctcgt cccacagtcc aaaattcatc atgattatat cactcattga tcatcaacga 4141 catcaacacc ccatcatagt ggcagtagct gaaccattca tcaaacacat taaaacaaaa 4201 gagaccatgt cttagttgag aggcaggtga atccgctaat gtgagatatt aatacgattg 4261 tagtgtgaga tggccggtct ttgtgt //