LOCUS KT329428 4802 bp DNA linear VRL 08-JUL-2016 DEFINITION Aleutian mink disease virus isolate Beijing, complete genome. ACCESSION KT329428 VERSION KT329428.1 KEYWORDS . SOURCE Aleutian mink disease virus ORGANISM Aleutian mink disease virus Viruses; ssDNA viruses; Parvoviridae; Parvovirinae; Amdoparvovirus. REFERENCE 1 (bases 1 to 4802) AUTHORS Xi,J., Wang,J., Yu,Y., Zhang,X., Mao,Y., Hou,Q. and Liu,W. TITLE Genetic characterization of the complete genome of an Aleutian mink disease virus isolated in north China JOURNAL Virus Genes 52 (4), 463-473 (2016) PUBMED 27007772 REFERENCE 2 (bases 1 to 4802) AUTHORS Xi,J., Yu,Y.L., Liu,W.Q. and Wang,J.G. TITLE Direct Submission JOURNAL Submitted (23-JUL-2015) Animal Molecular Virology at the State Key Laboratory of Agrobiotechnology, China Agricultural University, Yuanmingyuan West Road, No. 2, Haidian District, Beijing 100193, China COMMENT ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy sequencing ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..4802 /mol_type="genomic DNA" /country="China: Beijing" /collection_date="May-2015" /host="Mustela vison (mink)" /db_xref="taxon:28314" /isolate="Beijing" /organism="Aleutian mink disease virus" CDS join(206..1961,2044..2213) /codon_start=1 /protein_id="ALA40028.1" /translation="MAQAQLDEQRRLQDLYKQFKKEITDGEGLAWLFQQKTYTDKDNK PTKATPPLRTTSTDLRLAFDSIENNLRASNECLDNNDLNFCKLTLGKALVALDKHVRS HRWDANKVNFIWQIEKGKTQQFHIHCCLGYFDKDEDPKDVQKSLGWFIKKLNKDLAVI WSNHHCDIQNIKDPEAKANNLKVWIEDGPTKPYKYFNRQTKQEYNKPVSIWDYTIIYL FNKDKITQEGMDGYYAAGNGGIIDNLTTKQRKALRKLYLDEQSQGILDEDIDWEDSQS APKVTDQTDSATSKTGTSLVWKSCATKVTSKKEVDIPVKQPSKKMTSAQNTLDDLYKF GCFTPEDMILKMSDKYLEMSLEPNGAQKINTLLHMNQVRTSSNLNALDCITMFNEEED DKPLLNTIKDMGLNEQYLKKVLCTILTKQSGKRGCIWFYGPGGTGKTLLASLICKATV NYGMVTTSNPNFPWTDCGNRNIIWAEECGNIGNYVEDFKAITGGGDVKVDTKNKQPQS IKGSVIVTSNTNITKVTVGCVETNIHAEPLKQRMVKIRCMKTINPKTKVTPGMLAKWL STWDKIPIKLNHEMPELYLETTGPNSSATSATKTTGNLQPTTAETAESVSTADCDTPK RGASSVPPKQHKRPRHE" /product="NS1" /note="non-structural protein 1" CDS join(206..384,2044..2209) /codon_start=1 /protein_id="ALA40029.1" /translation="MAQAQLDEQRRLQDLYKQFKKEITDGEGLAWLFQQKTYTDKDNK PTKATPPLRTTSTDLRDYWTKLECHECHEDYWQLTTYYCRDCRKCEHGRLRHTKKGCE QCASKATQETSA" /product="NS2" /note="non-structural protein 2" CDS join(2206..2215,2289..4345) /codon_start=1 /protein_id="ALB26790.1" /translation="MSKIPQHYPGKKRSAPRHVFIQQAKKKKQTNPAVYHGEDTIEEM DSAEPEQMDTEQATNQTAEAGGGGGGGGGGGGGGGVGNSTGGFNNTTEFKVINNEVYI TCHATRMVHINQADTDEYLIFNAGRTTDTKTAQSKLNLEFFVYDDFHQQVMTPWYLVD SNAWGVWMSPKDFQQMKTLCSEISLVTLEQEIDNVTIKTVTETNQGNASTKQYNNDLT ASLQVALDTNNILPYTPAAPLGETLGFVPWRATKPTQYRYYHPCYIYNRYPNIQKSGA QLEWTGTQDDYLSVDEQYFNFITVENNIPINILRTGDNFHTGLYEFKSKPCKLTLSYQ STRCLGLPPLCTPKTDATHKVTSLENGADIVYIQGQDNTRLGHFWGEERGKKNAEMNR VRPYNIGYQYPEWIIPAGLQGSYFAGGPRQWSDTTKGAGSHSQQLQQNFSTRYIYDRN HGGDNQVDLIDGIPIHERSNYYSEHEMEQHTAKQPKLRTPPIHHSKIDSWEEEGWPAA SGTHFEDEVIYLDYFNFSGEQELEFPHEVLDDAAQMKKLLNSYQPTVAQDNVGPVYPW GQIWDKKPDMDHKPSMNNNAPFVCKNNPPGQLFVKLTENLTDTFNYDENPDRIKTYGY FTWRGKLVLKGKLSQVTCWNPVKRELIGEPGVFGKENYHKQIPNNKGNFEIGLQYGRS TIKYIY" /product="VP1" /note="structural protein 1" CDS 2408..4345 /codon_start=1 /protein_id="ALA40030.1" /translation="MDSAEPEQMDTEQATNQTAEAGGGGGGGGGGGGGGGVGNSTGGF NNTTEFKVINNEVYITCHATRMVHINQADTDEYLIFNAGRTTDTKTAQSKLNLEFFVY DDFHQQVMTPWYLVDSNAWGVWMSPKDFQQMKTLCSEISLVTLEQEIDNVTIKTVTET NQGNASTKQYNNDLTASLQVALDTNNILPYTPAAPLGETLGFVPWRATKPTQYRYYHP CYIYNRYPNIQKSGAQLEWTGTQDDYLSVDEQYFNFITVENNIPINILRTGDNFHTGL YEFKSKPCKLTLSYQSTRCLGLPPLCTPKTDATHKVTSLENGADIVYIQGQDNTRLGH FWGEERGKKNAEMNRVRPYNIGYQYPEWIIPAGLQGSYFAGGPRQWSDTTKGAGSHSQ QLQQNFSTRYIYDRNHGGDNQVDLIDGIPIHERSNYYSEHEMEQHTAKQPKLRTPPIH HSKIDSWEEEGWPAASGTHFEDEVIYLDYFNFSGEQELEFPHEVLDDAAQMKKLLNSY QPTVAQDNVGPVYPWGQIWDKKPDMDHKPSMNNNAPFVCKNNPPGQLFVKLTENLTDT FNYDENPDRIKTYGYFTWRGKLVLKGKLSQVTCWNPVKRELIGEPGVFGKENYHKQIP NNKGNFEIGLQYGRSTIKYIY" /product="VP2" /note="structural protein 2" ORIGIN 1 attaattctc aaccaatatt cgttagcaac caacaccagc tcgcttcgct cgcgcacctt 61 cggcgctggt gttgggcgct tcgcgcttgc taacttcata ttggttgaga attaatccgt 121 gtctttcctg tggaatgagg aagtagtgtg gtatataagc agaggctgct tagggcaaag 181 cacagaccgg ttacagcaaa gtaacatggc tcaggctcaa cttgatgaac agaggagact 241 gcaagacctg tataagcagt ttaagaagga gattactgac ggtgaaggcc ttgcctggtt 301 gttccaacag aagacataca ccgacaagga caacaaacca accaaagcaa caccaccact 361 gaggacaacc tctactgacc taaggttagc ttttgattct attgaaaaca atttaagagc 421 ttctaatgaa tgcctcgata acaatgactt aaacttttgt aaactaacct tagggaaagc 481 gttagtagca cttgataagc atgtaagaag tcacagatgg gatgctaaca aagttaactt 541 tatctggcaa atagaaaaag gaaagactca acaatttcat atccactgtt gcttgggtta 601 ctttgataaa gatgaagatc ctaaggatgt tcaaaaatcc ttaggttggt ttattaaaaa 661 actaaataaa gacttagcag ttatttggag taaccatcat tgtgacatac aaaacattaa 721 ggatcctgag gctaaagcta ataacttaaa agtatggatt gaagatgggc ctactaaacc 781 ttacaaatac tttaacagac aaaccaagca agaatacaac aaaccagtta gtatatggga 841 ctatacaata atatatctat ttaacaaaga taagataact caggaaggta tggatggtta 901 ctatgctgct ggtaacggcg gcattatcga caacctaact accaaacaac gaaaagcttt 961 gagaaaactt tacttagatg aacagtctca aggtatactg gatgaagaca tagactggga 1021 agatagccaa agcgcgccta aagtaactga ccaaactgac tcagcaacct caaaaacagg 1081 aactagtttg gtttggaaat catgtgctac taaagtaacc tcaaaaaaag aagttgatat 1141 tccagttaag caaccttcta aaaaaatgac ttcagctcag aatactttag atgatttata 1201 taagtttggt tgctttactc cagaagatat gattttaaaa atgagtgaca aataccttga 1261 aatgtcttta gaaccaaacg gagctcaaaa aattaacact ttacttcaca tgaaccaagt 1321 aaggacatca agcaacctta atgctcttga ctgtattaca atgtttaatg aagaagagga 1381 tgacaaacct ttactaaaca ccataaaaga catgggactt aatgaacaat atttgaagaa 1441 ggtactatgt accatactaa ccaagcaaag tggaaaaaga ggttgtattt ggttttatgg 1501 cccaggaggc actggaaaga ccttgctagc atccttaata tgtaaagcaa cagtaaacta 1561 tggtatggtt actacaagca acccaaactt tccatggact gattgtggta atagaaatat 1621 tatctgggct gaagagtgcg gtaacatagg taactatgtt gaagacttta aagctatcac 1681 tggaggtggt gatgtaaaag tagacaccaa aaacaagcaa cctcaatcca ttaaaggctc 1741 tgttattgta acaagcaaca ccaacataac caaagtaact gttggatgtg tggaaacaaa 1801 tattcacgca gaaccactga aacagaggat ggttaagata cgttgcatga aaaccattaa 1861 tcctaaaacc aaagtaacac caggaatgtt agcaaaatgg ctaagcacct gggacaaaat 1921 accaattaaa ctaaaccatg agatgcctga actatactta ggtaagtacc ttttggtaag 1981 taacacattt taaataccaa ctttaaaacc aacatcaact tataaggtta ctttacttta 2041 cagagactac tggaccaaac tcgagtgcca cgagtgccac gaagactact ggcaacttac 2101 aacctactac tgcagagact gcagaaagtg tgagcacggc cgactgcgac acaccaaaaa 2161 ggggtgcgag cagtgtgcct ccaaagcaac acaagagacc tcggcatgag taaaagtaag 2221 taacctactt aaagtaacct aacaccataa cactttactt tacttgtact tatgttactt 2281 tactttagtt cctcagcact atcctgggaa aaagagaagt gctccaagac acgtgtttat 2341 tcagcaagca aaaaagaaga agcaaactaa ccctgcggtg taccacggag aagacaccat 2401 agaggaaatg gattctgctg aacctgaaca aatggacact gagcaagcaa ctaaccaaac 2461 tgctgaagct ggtggtgggg ggggtggggg tggtgggggt ggtgggggtg gtggtgttgg 2521 taacagcact ggcggcttta ataacacaac agaattcaaa gtaataaaca atgaagtgta 2581 tattacttgt cacgctacta gaatggtgca catcaaccaa gctgacacag atgaatactt 2641 gatatttaat gctggtagaa ctactgatac taaaacagct caaagtaaac taaacttaga 2701 attttttgtc tatgatgatt ttcaccaaca agtaatgaca ccttggtatt tagtagatag 2761 caacgcctgg ggtgtatgga tgagtcctaa ggactttcaa caaatgaaaa cactatgtag 2821 tgaaattagt ttggttactt tagaacaaga gatagacaat gtaactataa agactgtaac 2881 agaaaccaac caaggtaacg catcaaccaa acaatacaac aatgacttaa ctgcgtcgtt 2941 acaggttgct ttagatacta acaatatatt gccatacact ccagctgcgc cgttggggga 3001 aacactgggg tttgttcctt ggagagcaac caaaccaacc caatataggt attatcatcc 3061 atgttacatt tacaacagat atcctaacat tcaaaaatca ggtgcacaat tagaatggac 3121 tggaacacaa gatgattacc ttagtgtaga tgaacagtac tttaacttta ttactgtaga 3181 gaacaacata cctattaaca ttctcagaac gggagataac tttcatacag gtttatatga 3241 gtttaaaagt aaaccatgta aactaacctt aagctaccag agtacacgtt gcttgggtct 3301 acctcctctc tgcacaccaa agacagatgc aacacacaaa gtaacctcac tagagaacgg 3361 agctgatata gtttacatac aaggacaaga taatactaga ctgggtcact tttggggtga 3421 agaaagaggt aagaagaacg cagaaatgaa cagagttaga ccttacaaca taggttacca 3481 ataccctgaa tggataatac cagcagggtt acagggtagt tactttgctg gaggaccaag 3541 acagtggagt gacacaacca aaggtgcagg ttcacacagc cagcagttac aacagaactt 3601 tagtactaga tacatatatg acagaaacca cggtggagac aaccaggtag acttaataga 3661 tggaataccc atccatgaaa gaagtaacta ttactcagaa catgagatgg agcaacatac 3721 agcaaagcaa ccaaagttac gtacaccacc cattcaccac tcaaagatag actcgtggga 3781 agaagaaggt tggcctgctg cttcaggcac acactttgaa gatgaagtta tatacttaga 3841 ctactttaac tttagtggtg aacaggagct agagtttcca catgaagtat tagatgatgc 3901 tgctcaaatg aaaaagctac ttaactcata ccaaccaacc gttgctcaag acaacgttgg 3961 tcctgtatac ccatggggac agatatggga caagaaacct gatatggacc acaaacctag 4021 tatgaacaac aacgctccat ttgtgtgtaa aaacaaccct ccaggtcaac tctttgttaa 4081 actaacagaa aacctcactg atacatttaa ctatgatgaa aatccagaca gaataaaaac 4141 ctatggttac tttacttgga gaggcaagct tgtactaaaa ggtaaactaa gccaagtaac 4201 atgctggaat cctgttaaga gagaactcat aggagaacct ggtgtatttg gtaaagaaaa 4261 ctatcacaaa cagataccaa acaacaaagg caactttgaa atagggttac aatatggaag 4321 aagcactatc aaatatatct actaaagtaa ccttgcatta tatgttacta tgttactatg 4381 ttactatgat aatatgtcaa taaaagttac ataaaaagtg aacaacctaa atactgtgta 4441 cttccttatt ttaccagaaa gtggcggatt aaaataaact tacattctat actatctatt 4501 atctactaac caacatatta ctttgctttg atatactgat gtaggaatac aggatactaa 4561 cattaatata tatactaaca tctatactac taacctaact atggcctaat gtatgcagtg 4621 tcggcgtcgc cgacaactac attatattat taggcatagt taggttagta gtatagatgt 4681 tagtatatat ataaatgtta gtatcctgtg ttcctacttc agtatataaa gaaagtttcc 4741 tataggtggg tttgcggtct atctagagtt gtggtccgta ttggtttctg taaaggacct 4801 ga //