LOCUS X81814 3852 bp RNA linear VRL 30-MAR-1995 DEFINITION Arabis mosaic virus RNA for polyprotein P2-U. ACCESSION X81814 VERSION X81814.1 KEYWORDS coat protein; polyprotein P2'; RNA2-U gene. SOURCE Arabis mosaic virus ORGANISM Arabis mosaic virus Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Picornavirales; Secoviridae; Comovirinae; Nepovirus. REFERENCE 1 AUTHORS Loudes,A.M., Ritzenthaler,C., Pinck,M., Serghini,M.A. and Pinck,L. TITLE The 119 kDa and 124 kDa polyproteins of arabis mosaic nepovirus (isolate S) are encoded by two distinct RNA2 species JOURNAL J. Gen. Virol. 76 (PT 4), 899-906 (1995) PUBMED 9049336 REFERENCE 2 (bases 1 to 3852) AUTHORS Pinck,L. TITLE Direct Submission JOURNAL Submitted (21-SEP-1994) L. Pinck, Inst. de Biologie Moleculaire des Plantes IBMP, 12 rue General Zimmer, 67084 Strasbourg Cedex, FRANCE FEATURES Location/Qualifiers source 1..3852 /variety="RNA2-U" /mol_type="genomic RNA" /db_xref="taxon:12271" /isolate="S" /organism="Arabis mosaic virus" gene 261..3656 /gene="RNA2-U" CDS 261..3656 /db_xref="GOA:Q65030" /db_xref="InterPro:IPR005054" /db_xref="InterPro:IPR005305" /db_xref="InterPro:IPR005306" /db_xref="InterPro:IPR021081" /db_xref="UniProtKB/Swiss-Prot:Q65030" /codon_start=1 /protein_id="CAA57412.1" /gene="RNA2-U" /translation="MGKFYYSNRRLACYAQATNRHLGGSFEQWLQCMEDSAFRAEVKA RVQSEREEVRVRRLFSYPVGSGPAEDPRGVNWAYICLGTTAHWAGVPGDMVPPPEPVK AQEVVVQRSVGEDGRTGYRRQCLNIPNPPPMPKPYSRPIGAFAPTRSGFIRATVKRLT REREESRAAALFAELPLEYPQGAPLVVPRGFAAMRWTYHATWSRWYDTSDERALRTHP GGPALPPLPPPPPIQKPPSFEERLQAALHRQSCARAFALETSLGLNMAWVGMATIPST SVCCADGRTTGGQTIAQEADPLTHRVSSNTAPGRAQWISERRSALRRREQANSLQGLA AQTDMTFEQARNAYLGAADMIEQGLPLLPPLRNAYAPRGLWRGPSTRANYTLDFRLNG IPTGENTLEILYNPVSDEEMEDYRDRGMSAVVIDALEIAINPFGMPGNPTDLTVVATY GHERNMERAFIGSSSTFLGNGLARAIFFPGLQYSQEEPRRESLIRLYVASTNATVDAD SVLAAISVGTLRQHIGSLHSRTVASSVHAAQVQGTTLRATMMGNSVVVSPEGGLVSGV PEANVQIGGGSSMRMVGPLAWENVEEPGQTFSIRSRSRSVRVDRNADVGIAHPRMSTT TRGLAGRGTVPVPKDCQAGKYLKTLDLRDMVSGFSGIQYEKWITAGLVMPDFKVVIRY PANAFTGITWVMSFDAYNRITSSISTTASPAYTLSVPHWLLHHKNGTTSCDIDYGELC GHAMWFSATTFESPKLHFTCLTGNNKELAADWEFVVELYAEFEAAKSFLGKPNFIYSA DAFNGSLKFLTIPPLEYDLSATSAYKSVSLLLGQTLVDGTHKVYNFNNTLLSYYLGIG GIVKGKVHVCSPCTYGIVLRVVSEWNGVTNNWNQLFKYPGCYIEEDGSFAIEIRSPYH RTPLRLIDAQSASSFTSTLNFYAISGPIAPSGETAKMPVVVQIEEIALPDLSVPSFPN DYFLWVDFSSFTVDVEEYVIGSRFFDISSTTSTVALGDNPFSHMIACHGLHHGILDLK LMWDLEGEFGKSSGGVTITKLCGDKATGMDGASRVCALQNMGCETELYIGNYAGANPN TALSLYSRWLAIKLDKAKSMKMLRILCKPRGNFEFYGRTCFKV" /product="polyprotein P2' 124KDa" mat_peptide 261..1091 /gene="RNA2-U" /product="N-terminal 31KDa protein" mat_peptide 1092..2138 /gene="RNA2-U" /product="central putative movement 37KDa protein" mat_peptide 2139..3653 /gene="RNA2-U" /product="C-terminal coat 55.6KDa protein" ORIGIN 1 atgaaaattt ttgtggagtt ttcatattaa cgcaatccac aaccttttca gccaagagtt 61 tgagaaactc aaaatttgtt cgagtcaatc cgttaagagc ggaacaaaag tcaaaccgtt 121 tagagcggta ccaaagcgaa gagtttaaga aactcaccat tgccttcctt tcctttcttg 181 cttacgcgtt ttatttattt agtgtttgtt ttgtctgttt tataggagga gcgctttgtt 241 tctcttactt ttctgccctt atgggcaagt tttattatag taacaggcgt ctggcctgtt 301 atgcccaagc tacgaaccgc catctgggcg gttcttttga acaatggctc cagtgtatgg 361 aggactcagc ctttagggct gaggttaaag cccgtgtcca atcggagcgg gaagaagttc 421 gcgttaggcg acttttttcc tatcccgttg gctcgggacc tgctgaagac ccccgagggg 481 tcaattgggc atacatatgc cttggtacta ctgcccattg ggcaggagtg ccaggagata 541 tggtgccgcc gcccgagccg gttaaagctc aagaggtcgt tgtgcaacga tctgtcgggg 601 aggatgggcg caccgggtat cgccgccagt gcctaaacat ccccaacccg ccccctatgc 661 caaagcctta ttctaggcca attggggctt ttgcaccaac ccggtccggg tttatacggg 721 ccactgtgaa aagactcacc cgggaacggg aagagtcaag agctgcggca ctctttgccg 781 aattgccatt ggagtatcct cagggtgctc ccttggttgt gcctcgtggc tttgcggcca 841 tgaggtggac ttatcatgcc acctggagca ggtggtatga cactagtgat gagcgtgctt 901 tacgcactca tcctggtggt cctgctttgc ccccactccc cccccctccc ccaatccaaa 961 aaccaccctc ttttgaggag aggttacagg ctgctcttca taggcagtct tgtgctaggg 1021 cttttgccct ggaaacctcg ctgggcctca atatggcctg ggtgggaatg gctaccatcc 1081 ccagtacgtc tgtgtgctgt gctgatggta ggactaccgg tgggcaaaca attgcccaag 1141 aggctgaccc cttgactcat agggttagct ccaatacagc ccccggtagg gctcaatgga 1201 tctcagagcg ccgcagtgct ctgagaagga gggagcaggc taatagtctg cagggtcttg 1261 ctgctcaaac tgacatgaca tttgagcagg ccaggaatgc gtatcttggt gctgctgata 1321 tgatagagca aggcctacca ttactacctc ctttgagaaa tgcttatgca cctcgtggtc 1381 tatggagggg accgtctacc agagccaatt acaccttgga ttttaggctc aatggtatac 1441 cgactgggga gaatacttta gaaatattgt ataatcccgt gtcagacgag gaaatggaag 1501 actaccgtga caggggtatg tcagcagtcg tgattgatgc gcttgaaatt gccattaatc 1561 cttttggaat gccaggcaat ccgactgatc ttactgtcgt cgcaacatat gggcacgaac 1621 gtaatatgga acgtgctttt attggttcct cttcgacttt ccttggaaat gggttggcga 1681 gggccatttt ctttcctggt ttgcaatata gccaagaaga accgaggcgc gaatctttga 1741 ttcgcctgta tgttgcttcc accaatgcca ctgttgatgc tgactcggtt ttggcagcca 1801 ttagtgttgg aactttgcgt caacacattg gctccttaca tagtagaaca gtggcaagtt 1861 ctgtgcatgc tgctcaagtg caaggtacta ccttgagggc taccatgatg ggcaattccg 1921 tcgtggtttc ccctgaggga ggtcttgttt ctggagtacc tgaagccaat gtccaaattg 1981 gtggaggctc tagcatgcga atggttggtc ccctggcatg ggaaaatgtt gaagagccag 2041 gacagacctt ttccattaga agtcgctctc gctctgttag agttgaccgc aatgctgacg 2101 tgggaatcgc acatcctcgg atgagcacta ctacgcgtgg cctcgctgga agaggtactg 2161 tcccggtgcc taaggattgc caggcaggaa aatacttgaa aacccttgat ttgagagata 2221 tggttagtgg gttttcaggc atccagtatg aaaagtggat tactgctgga cttgttatgc 2281 cagattttaa agtagtaatt cgctacccag ccaatgcttt tacgggtatt acgtgggtta 2341 tgagttttga tgcttataat cgtataacca gtagtatttc cactactgct agcccagcgt 2401 atactctttc tgtccctcat tggctgttac atcacaaaaa tgggacaact tcatgtgata 2461 ttgattatgg ggaactctgt ggccatgcta tgtggtttag tgccactact tttgagagtc 2521 ccaaactcca tttcacgtgc ctcactggaa ataacaaaga gttggcagcg gattgggagt 2581 tcgttgtcga attatatgct gagtttgagg cagcaaagag ttttcttggg aagcccaact 2641 tcatttatag cgctgacgct tttaatgggt ctctcaagtt tctgactatc ccaccactgg 2701 aatatgactt aagtgcaacc agtgcctaca agagtgtgtc cctgttattg gggcagactc 2761 ttgttgacgg tactcataag gtgtataatt ttaataatac actcttgagt tactatttag 2821 gcattggggg tattgtcaag ggaaaggtgc atgtttgtag cccttgcact tatggcatag 2881 tcctaagagt tgttagtgaa tggaacgggg tcactaacaa ctggaatcaa ctgtttaaat 2941 accccgggtg ttacatcgag gaggatggga gctttgctat tgaaatacgc tccccctacc 3001 accgaactcc acttcgctta attgacgcgc aatcagcaag ctcttttacg agtacgttga 3061 atttttacgc aatctcaggg cccatagccc caagtggaga aacagcgaag atgccagtag 3121 tcgtgcaaat tgaagaaatc gcacttccgg atctttctgt gccatccttc cccaatgatt 3181 atttcctttg ggttgacttt tcatcattca ctgtggatgt tgaagagtat gtgatagggt 3241 cgaggttttt cgatatttcc tctactacta gcactgtagc ccttggagac aatccttttt 3301 cccatatgat agcttgtcat ggactccatc atggaatcct tgatcttaag ttaatgtggg 3361 atttggaggg tgagtttgga aagagttctg gtggtgttac catcacgaaa ttgtgtggtg 3421 ataaggccac tggcatggat ggagcatctc gtgtttgtgc tttacaaaac atggggtgtg 3481 aaactgagct atacataggg aattatgcgg gtgctaaccc aaatactgca ttatccttgt 3541 atagtcgatg gcttgctatt aagcttgata aagctaagag catgaaaatg cttagaattt 3601 tgtgcaagcc tcgagggaat ttcgaatttt atggccggac gtgctttaaa gtttaaattc 3661 cctcccgtgt ctcgggaatc tgacgttaaa agacccaatt tgcgatatat ttatatttag 3721 cttgtttact gctttagtgt gtttaatttc atgcttatag tggcgacagt gtgttgtttg 3781 tcctttggac acgcttgcct tgttggacat aaaaagattt ttcttttctt tttactgctt 3841 ttgtaactat at //