LOCUS       KP202360                1858 bp    cRNA    linear   VRL 15-SEP-2015
DEFINITION  Araraquara virus strain LBCE 9480 nucleocapsid protein gene,
            complete cds.
ACCESSION   KP202360
VERSION     KP202360.1
KEYWORDS    .
SOURCE      Araraquara virus
  ORGANISM  Araraquara virus
            Viruses; ssRNA viruses; ssRNA negative-strand viruses;
            Bunyavirales; Hantaviridae; Orthohantavirus.
REFERENCE   1  (bases 1 to 1858)
  AUTHORS   Guterres,A., de Oliveira,R.C., Fernandes,J., Schrago,C.G. and de
            Lemos,E.R.
  TITLE     Detection of different South American hantaviruses
  JOURNAL   Virus Res. 210, 106-113 (2015)
   PUBMED   26220480
  REMARK    Publication Status: Available-Online prior to print
REFERENCE   2  (bases 1 to 1858)
  AUTHORS   Guterres,A., Oliveira,R.C., Fernandes,J. and Lemos,E.R.S.
  TITLE     Direct Submission
  JOURNAL   Submitted (25-NOV-2014) Laboratorio de Hantaviroses e
            Rickettsioses, Instituto Oswaldo Cruz - FIOCRUZ, Av. Brasil, 4365,
            Rio de Janeiro, Rio de Janeiro 21040-360, Brazil
COMMENT     ##Assembly-Data-START## Sequencing Technology :: Sanger dideoxy
            sequencing ##Assembly-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /mol_type="viral cRNA"
                     /country="Brazil: Goias State"
                     /collection_date="2006"
                     /host="Necromys lasiurus"
                     /db_xref="taxon:139032"
                     /strain="LBCE 9480"
                     /organism="Araraquara virus"
     CDS             43..1320
                     /codon_start=1
                     /protein_id="ALD61436.1"
                     /translation="MSNLQELQENITAHEQQLVTARQKLKDAEKAVDVDPDEVNKSTL
                     QGRRAAVSTLETKLGELKRQLADLVAAQRLASKPVDPTGIEPDDHLKEKSSLRYGNVL
                     DVNSIDLEEPSGQTADWKAIGAYILGFAIPIILKALYMLSTRGRQTVKDNKGTRIRFK
                     DDSSFEEVNGIRKPKHLYISMPTAQSTMKAEEITPGRFRTIACGLFPAQVKARNIISP
                     VMGVIGFAFFVKDWMERIEDFLASECPFLPKPKNPSEAFMATNKAYFLNRQKQVDESQ
                     VPDIVDLIDHAEAESATLFKEIASPHSVWVFACAPDRCPPTALYVAGMPELGAFFAIL
                     QDMRNTIMASKSVGTAEEKLKKKSAFYQSYLRRTQSMGIQLDQKIIILYMLSWGKEAV
                     NHFHLGDDMDPELRQLAQSLIDTKVKESQTKSL"
                     /product="nucleocapsid protein"
ORIGIN      
        1 tagtagtaga ctccttgaga agctactgct gcgaaagctg gaatgagcaa cctccaagaa
       61 ttacaggaaa acatcaccgc acacgaacaa cagctcgtga ctgccaggca gaagcttaaa
      121 gatgcagaaa aagcagttga tgtggaccca gatgaggtta acaaaagcac attacaaggt
      181 agacgggcgg ctgtgtcaac attggagaca aaactcgggg agcttaagag gcagttggca
      241 gatttggttg cggctcaaag actggcttca aaaccagttg atccaacagg gattgaacct
      301 gatgatcatt taaaggagaa atcatcactt agatatggga atgtgctgga tgttaattct
      361 attgatcttg aggagccaag tggacagaca gcagactgga aggcaattgg ggcttacatc
      421 ttgggatttg caatccctat tatactaaag gccttatata tgctgtcaac tcgtggaagg
      481 caaacagtga aggacaacaa aggcactaga attaggttca aggatgattc atcctttgaa
      541 gaagtgaatg ggatccggaa accaaagcat ctttacatct ctatgccaac tgcacagtcc
      601 accatgaaag ctgaagagat aacacctgga aggttcagga ctattgcatg cggtttattc
      661 ccagcacaag taaaggcccg gaacatcatc agtccagtca tgggggtaat tggctttgca
      721 ttttttgtga aagattggat ggagagaata gaagattttc tagcctctga atgcccattt
      781 ttacccaaac ctaagaatcc ctcagaggca ttcatggcca ctaacaaggc ttactttctc
      841 aatcgacaga agcaagttga tgaatctcag gtccctgata tagtagattt aattgaccat
      901 gctgaagctg agtcggcaac tttatttaag gaaattgcca gcccacattc tgtttgggta
      961 ttcgcatgtg cccctgatag atgcccaccg acagcattgt atgtagccgg aatgcctgaa
     1021 ttgggtgcct tctttgcgat cttgcaggat atgaggaata ccattatggc atctaaatca
     1081 gttggcactg cagaagaaaa gttgaagaag aaatctgctt tttaccaatc ttatttgaga
     1141 cggacacagt ccatggggat acaactggac caaaaaatca taatcttgta catgctatcc
     1201 tggggtaaag aggctgtaaa ccatttccac ctgggtgatg atatggaccc agaacttcgc
     1261 caacttgctc agtcattgat tgatactaag gttaaggaat ctcaaaccaa gagcctttaa
     1321 aactgtaaag ataagatatt agacggtggt ggtcagtgtg atggtctttt cgggtgagag
     1381 ccatacagtt aatcatctct agggctatct tttataactc aagggtctat cattataagg
     1441 gtggtagttg ggtttctgca ctaattacgg gtttactgtc ctttgcacta tgtcaatatt
     1501 tgcactcggg ggttgggacc attttgtaac catgttgtag ttttatgtta attagtcaaa
     1561 atttgtttaa gtgttaagtt tgctagctgc atgaaatcag tgattgatca gttagattag
     1621 gtgatataat catttatgtt gttgtaatct tagaacagta taattgtcat atgttaaggt
     1681 tcactaacaa tgatattatg taattggatg taaatttcat tccctgcttt gctgcttcgc
     1741 attatactaa tcttcaacaa gactacctca tccacaaccc ttcccccttt ctacctcaac
     1801 acatactacc tcaaatctta ttttttcttg atttgcttct tcaaggagca tactacta
//