LOCUS       FJ652575                1399 bp    RNA     linear   VRL 21-MAY-2009
DEFINITION  Atlantic salmon reovirus Canada-2009 fusion-associated small
            transmembrane protein (p22) and non-structural protein (NS31)
            genes, complete cds.
ACCESSION   FJ652575
VERSION     FJ652575.1
KEYWORDS    .
SOURCE      Atlantic salmon reovirus Canada-2009
  ORGANISM  Atlantic salmon reovirus Canada-2009
            Viruses; dsRNA viruses; Reoviridae; Spinareovirinae; Aquareovirus.
REFERENCE   1  (bases 1 to 1399)
  AUTHORS   Racine,T., Hurst,T., Barry,C., Shou,J., Kibenge,F. and Duncan,R.
  TITLE     Aquareovirus effects syncytiogenesis by using a novel member of
            the FAST protein family translated from a noncanonical translation
            start site
  JOURNAL   J. Virol. 83 (11), 5951-5955 (2009)
   PUBMED   19297495
REFERENCE   2  (bases 1 to 1399)
  AUTHORS   Shou,J. and Duncan,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (21-JAN-2009) Microbiology and Immunology, Dalhousie
            University, Halifax, Nova Scotia B3H 1X5, Canada
FEATURES             Location/Qualifiers
     source          1..1399
                     /mol_type="genomic RNA"
                     /db_xref="taxon:607705"
                     /country="Canada"
                     /organism="Atlantic salmon reovirus Canada-2009"
                     /host="Atlantic salmon"
                     /note="genogroup A"
     gene            17..613
                     /gene="p22"
     CDS             17..613
                     /codon_start=1
                     /protein_id="ACN38055.1"
                     /gene="p22"
                     /translation="MGNTISNTVQYTVLQIDRSCCIKTSLTATSEATSWAIPPLAICC
                     CCCICCTGGLYLVHSGRFPGLSRRLDVLGGSGSTPKHSLRSHRHPKPRVHRVSFSDSS
                     DSSDISDLELPRHGSHPLAHSFRPEVDRHRPRPSTQVQQTSFIPLVPLRSGSSLDDGI
                     VRSQPSRDSRPHEQFEDWLQQAHLLRPGRVSGSTNPFT"
                     /product="fusion-associated small transmembrane protein"
                     /note="FAST protein; membrane fusion protein"
     gene            489..1325
                     /gene="NS31"
     CDS             489..1325
                     /codon_start=1
                     /protein_id="ACN38056.1"
                     /gene="NS31"
                     /translation="MGSYALNPHGIRGPTSNLRIGFNKHISYDQDEFPDLPTPSPDHI
                     PDWVTDHDKFNGHPLPLVYDGRLTPITGPHHLWEPDSYVEWQTWGCLRPFSPFSVWPP
                     TVPNWFSRKVLHVFSNMSPYACAAEKSPNPLPYWRLNDQGRDWSVFWDLIWRCAQTRG
                     ARICFAKTPFIQTMLRLTDDQLSRLPSAEDPISLLNIAGWDALLLNGLPPNLVRALMR
                     SPPNPEVVELDLLVSWFDVVIRIPYDVQHPLGLGFSPDQFWTHPFVVLCYLRWRLLGG
                     DD"
                     /product="non-structural protein"
ORIGIN      
        1 gttttagtca atcatcctgg ggaataccat ctcaaacacc gttcagtaca cggtactgca
       61 gatcgacaga tcttgctgta tcaaaaccag cctcaccgcc acttccgaag ccacttcctg
      121 ggccatcccc cctctcgcaa tctgttgctg ctgttgcatc tgctgtaccg gcggactata
      181 tctcgttcat tctggacgtt ttccaggcct cagccgaagg ttggacgtgc tcggaggttc
      241 ggggtcaacc ccaaaacact cgctgcgtag ccaccggcac ccaaagccac gtgtacatcg
      301 cgttagcttc agtgattcta gtgactctag tgatatctct gatctggaat tgcctcggca
      361 cgggtctcat cctctggcgc attcattcag gcctgaagtc gatcgccacc gccctcgtcc
      421 ctcaacgcaa gtccagcaga catctttcat cccgctcgta ccactcaggt ccggatcaag
      481 tttagacgat gggatcgtac gctctcaacc ctcacgggat tcgcggcccc acgagcaatt
      541 tgaggattgg cttcaacaag cacatctcct acgaccagga cgagtttccg gatctaccaa
      601 ccccttcacc tgaccacatt cccgactggg tgacggatca tgacaagttc aacggtcatc
      661 ccctccccct cgtctacgat ggacgtctga cacccatcac gggtcctcac catctttggg
      721 agcctgacag ttatgtagag tggcagacct gggggtgcct ccgacccttc tctcctttca
      781 gcgtttggcc accaacggta ccgaactggt tcagccgtaa ggtcctccac gtcttcagca
      841 acatgtcccc gtacgcctgc gctgctgaga agagtcccaa tccccttccc tactggcgtt
      901 tgaatgatca gggtcgtgac tggagcgtat tctgggactt aatttggcga tgtgctcaga
      961 cacgtggtgc tcgcatctgt tttgcgaaga cccccttcat ccagacgatg ctacgcctga
     1021 ctgacgatca gctgtcccgt cttccatccg ctgaggatcc aatcagtctc ttaaacatcg
     1081 caggatggga cgcccttctt ctcaacggtc ttccccctaa cctggtgcga gcattgatga
     1141 ggtcccctcc aaacccagag gtcgttgagc tggatctgct cgtctcctgg ttcgatgtcg
     1201 tgattcgtat tccctatgac gtgcaacacc ccctaggcct tggtttcagc cctgatcaat
     1261 tttggactca tccgttcgtc gtcctgtgct acctgcgctg gcgtttgttg ggaggtgacg
     1321 actaggatgg cgtccgcgac agttgaggcc tgggcctcgg ggatttagtc ccctgtcgcc
     1381 agcgtgactg ctattcatc
//