LOCUS GQ368252 4684 bp DNA linear VRL 05-JAN-2011 DEFINITION Avian adeno-associated virus isolate YZ-1, complete genome. ACCESSION GQ368252 VERSION GQ368252.1 KEYWORDS . SOURCE Avian adeno-associated virus ORGANISM Avian adeno-associated virus Viruses; ssDNA viruses; Parvoviridae; Parvovirinae; Dependoparvovirus. REFERENCE 1 (bases 1 to 4684) AUTHORS Wang,A.P., Sun,H.C., Wang,J.Y., Wang,Y.J. and Yuan,W.F. TITLE [Construction and identification of recombinant avian adeno-associated virus expressing GFP reporter gene] JOURNAL Bing Du Xue Bao 23 (4), 292-297 (2007) PUBMED 17894232 REFERENCE 2 (bases 1 to 4684) AUTHORS Wang,J., Zhu,L., Zhu,J., Sun,H. and Zhu,G. TITLE Molecular characterization and phylogenetic analysis of an avian adeno-associated virus originating from a chicken in China JOURNAL Arch. Virol. 156 (1), 71-77 (2011) PUBMED 20890715 REFERENCE 3 (bases 1 to 4684) AUTHORS Wang,J., Zhu,J., Zhu,L., Sun,H. and Zhu,G. TITLE Direct Submission JOURNAL Submitted (07-JUL-2009) College of Veterinary Medicine, Yangzhou University, Wenhui East Road 12, Yangzhou, Jiangsu 225009, P.R. China FEATURES Location/Qualifiers source 1..4684 /mol_type="genomic DNA" /country="China" /collection_date="Sep-2005" /host="chicken" /db_xref="taxon:341671" /isolate="YZ-1" /organism="Avian adeno-associated virus" gene 243..2237 /gene="rep" CDS 243..2237 /codon_start=1 /protein_id="ACU30841.1" /gene="rep" /translation="MRSYYEVIVQLPNDVESQVPGISDSFVNWITSREWTLPEDADWD LDQVDQVQLTLGDKIQREIRNHWGTMAKEPDFHYFIQLEQGEVFFHLHVLLETCSVKP MVLGRYIRHIQQKIVSKVYCGHEPAMEGWMRVTKTKNFGGANKVRAESYIPAYLIPKQ QPEVQWAWTNVPEYIKACLHRELRASLARLHFEEAGLSQSKENLARTADGAPVIATRV SKRYMELVDWLVEKGITTEKEWLLENRESFRSFQASSNSARQIKTALQGAIQEMLLTK TAEDYLVGKDPVSDDEIRQNRIYKILELNHYDPAYVGSILVGWCQKKWGKRNTLWLFG PATTGKTNIAEAIAHAVPFYGCVNWTNENFPFNDCVEKMIIWWEEGKMTAKVVETAKA ILGGSRVRVDQKCKASVPIEPTSVIITSNTNMCYVIDGNTTTFEHKQPLEDRMFKLEL LTRLPDDFGKVTKQEVRQFFRWSQDHLTPVIPEFLVRKAESRKRPAPSGEGYISPTKK PALAEQQQASESAEPVPTRYRIKCSKHCGMDKMLFPCQICESMNRNINICAIHKTTEC KECFPEYGDKKDTVPELPPCTEHNVSRCYQCHSGELYRVTSDSDEKPAPASDEGTEPS YAPCTIHHLMGKSRGLVSCAACRLKNSTLHDDLDDGDLEQ" /product="Rep78" /note="nonstructural replication protein" gene 2255..4471 /gene="VP1" CDS 2255..4471 /codon_start=1 /protein_id="ACU30842.1" /gene="VP1" /translation="MSLISDAIPDWLERLVRKGVNAAADFYHLESGPPAPKANQQTQE SPEKDDSRGLVFPGYKYLGPFNGLDKGEPVNEADAAALEHDKAYDLELKDGHNPYFEY NEADRRFQERLKDDTSFGGNLGKAIFQAKKRVLEPFGLIEQPDNTAGTGEKRPERVDD FFPKKKKAKTEQGKTPAQTGEDPGEGTSSNAGSSAPSSVGSSVMAEGGGGPVGDAGQG ADGVGNSSGNWHCDSQWLDNGVVTRTTRTWVLPSYNNHLYKRIQGPGGTDNNNKYFGF STPWGYFDYNRFHCHFSPRDWQRLINNNWGIRPKAMRFRLFNIQVKEVTVQDSNTTIA NNLTSTVQVFADKDYQLPYVLGSATEGTFPPFPADIYTIPQYGYCTLNYNNEAVDRSA FYCLDYFPSDMLRTGNNFEFTYTFEDVPFHSMFAHNQTLDRLMNPLVDQYLWAFSSVS QPSSGQRRLNYSRGTKNNMAVQYKNWLPGPFFRDQQIYTGASNITQNNVFNVWDKGKQ WVIDNRTNLMQPGPAAATTFSGEPDRQAMQNTLAFSRTVYDQTTSTADRNQLLITNED EIRPTNSVGIDVWGVVPNNQQSNVSPGNRTGVNNQGALPGMVWQNRDIYLQGPIWAKV PDTDNHFHPSPLIGGFGCKHPPPQIFIKNTPVPANPPETFQTAKVASFINQYSTGQCT VEIFWELKKETSKRWNPEIQFTSNFGNAADIQFSVSDTGLYSEPRPIGTRYLTKPL" /product="VP1" /note="structural protein" ORIGIN 1 tggccagttt ccaaaacagg ctcgctcgct cactcggggc gcgacgccaa aggcgtcgca 61 gcgacccctt cggggtcgcg ccccgagtga gcgagcgagc ctgttttgga aactggccag 121 cactccggtg aggtaatgcc gtcacgtggt accgcacgtg aataggaaat ctcgcgagaa 181 cgtaaacaaa tataagacga cgccacgccg cgccgcgtca tacgcgcgcg cgcaccggcg 241 agatgaggtc gtactacgag gtcatcgttc agctgcccaa cgacgtcgag agtcaggtac 301 ctggaatctc ggattcgttc gtcaactgga ttacgtcgcg agaatggacg ttgcctgagg 361 acgccgattg ggatttggac caggtcgatc aagttcaact gacgctcggc gacaaaatcc 421 aacgggagat tcgaaatcat tgggggacaa tggccaaaga accggacttt cactatttta 481 tccaactcga acaaggtgag gtgttctttc atttgcacgt cctgctggaa acgtgttccg 541 tcaagccgat ggtgctcggg cgatacattc ggcatattca gcaaaagatc gtgagtaaag 601 tctactgcgg acacgaaccc gcgatggaag gatggatgcg tgtgaccaaa accaagaatt 661 ttgggggcgc gaacaaggtt cgggccgaat catatattcc cgcctacctg attccgaaac 721 agcaaccgga agtgcagtgg gcgtggacta acgtgcccga gtatataaaa gcgtgcctgc 781 accgagaact gcgtgccagt ctcgcgcgac ttcacttcga ggaggcgggg ctctcgcagt 841 ccaaggaaaa tctcgcgaga actgcagacg gcgctcccgt gatcgcgacc cgcgtcagca 901 aacgctacat ggagctcgtg gattggctcg tggagaaggg gatcaccacc gagaaggaat 961 ggctgctgga aaacagagaa agctttcgga gctttcaagc ctcgagcaac tcggcgcgtc 1021 agatcaagac ggctctacaa ggcgccattc aggagatgct tctgaccaag acggcggagg 1081 actacctcgt cggaaaggat cccgtctcgg acgacgagat tcgtcagaat cgcatctaca 1141 agatcctgga actgaaccac tacgacccgg cgtatgtggg gagtattttg gtcgggtggt 1201 gccagaagaa atggggcaag cgaaacacgc tgtggctgtt cggacctgcg accaccggca 1261 agaccaacat cgcggaggct attgcccatg ctgtgccgtt ctatggatgc gttaactgga 1321 ccaacgagaa ctttccgttc aacgactgcg tcgaaaagat gattatctgg tgggaggagg 1381 gcaaaatgac cgccaaagtg gtggaaacgg ccaaggcgat tctgggggga tctcgggtga 1441 gagtggatca aaaatgcaaa gcttcggttc ctattgaacc gacgtcggtc attattacca 1501 gtaacaccaa catgtgttat gtcatcgacg ggaacacgac tacgttcgag cataagcagc 1561 cgttggagga caggatgttt aagctcgagc tgttgactcg tttacccgat gactttggta 1621 aggtgaccaa acaggaggtg cgtcaattct tcaggtggtc ccaggatcac ctgacgcccg 1681 tgatcccaga attcctggtg cggaaggcgg agtctcgcaa aagacccgcc ccttccgggg 1741 aaggctatat aagcccgacc aagaagcccg cgctcgcaga gcagcagcag gcgtcggaga 1801 gcgcggagcc ggttcccacc aggtatcgta tcaaatgctc gaaacattgc gggatggata 1861 aaatgttgtt tccttgccaa atttgtgaat cgatgaacag aaatattaat atatgtgcga 1921 ttcataaaac aacggaatgt aaagaatgtt ttccggaata cggggataaa aaggacactg 1981 taccagaact acccccctgt acagaacata acgtgtctcg ttgttatcaa tgtcattcgg 2041 gcgaattgta tcgcgtgact tcggactctg acgagaaacc tgcccccgcg agtgatgaag 2101 gcactgagcc atcctatgct ccctgcacga ttcaccactt gatgggcaag agtcgcgggt 2161 tagtgtcgtg tgctgcatgt cggttaaaaa atagtacatt gcatgatgac ttggacgatg 2221 gcgatctcga acaataaatg attgaaatat agccatgtct cttatttctg atgcgattcc 2281 agattggttg gagcggttgg ttcgcaaggg agtcaacgct gcggctgact tttatcattt 2341 ggagagcggt cctcctgctc ctaaggccaa tcagcaaact caagaatctc ctgaaaagga 2401 cgattctaga ggtctcgtgt tcccgggtta caagtatcta ggccctttta acggtctaga 2461 taaaggagaa cccgtcaacg aggcagacgc tgccgcctta gagcacgaca aggcttacga 2521 cctcgaactc aaggacgggc acaacccgta ctttgagtac aacgaggccg atagacgttt 2581 ccaggaacgt ctcaaagacg atacctcttt cggggggaat ctcggtaaag ctatctttca 2641 ggccaaaaag agggtcctcg agccctttgg tctgattgaa caacccgaca acacggccgg 2701 gaccggggag aagcgtcccg aacgcgtcga cgactttttc ccgaaaaaga agaaggccaa 2761 gaccgagcaa ggcaaaaccc ctgctcaaac gggcgaagac cccggagaag gaacctcttc 2821 caacgctgga tcaagcgccc cctctagtgt gggatcatct gtcatggctg aaggaggtgg 2881 cggcccagtg ggcgatgcag gccagggtgc cgatggagtg ggcaattcct cgggaaattg 2941 gcattgcgat tcccaatggc tggacaacgg agtcgtcact cgaaccaccc gaacctgggt 3001 cttgcccagc tacaacaacc acctgtacaa gcggatccaa ggaccgggag gaaccgacaa 3061 caacaacaaa tactttggat tcagcacccc ctgggggtac tttgactaca accgattcca 3121 ctgccacttt tctccgcgag actggcaaag actcatcaac aacaactggg gcatccgacc 3181 caaagcgatg cgctttagac tctttaacat ccaggtcaaa gaagtcacgg tccaagactc 3241 caacaccacc attgccaaca acctcaccag cacggtccaa gtctttgcgg acaaggacta 3301 ccagctgccg tacgtcctcg gatcggctac cgaaggcacc ttcccgccgt tcccagcgga 3361 tatctacacg atcccgcagt atggttactg cacgctaaac tacaacaacg aggcggtgga 3421 tcgttcggcc ttctactgtc tggactactt tccctcagac atgctgcgga caggaaataa 3481 ctttgaattc acttacacgt tcgaggacgt tcctttccat agcatgtttg cccacaacca 3541 gacgctagac cggctgatga atcccctcgt cgatcagtac ctctgggcct tcagctccgt 3601 cagccaaccc agctcgggtc agagacggct caattattcc agaggcacta aaaacaatat 3661 ggcggtccaa tacaagaact ggttacccgg acccttcttc agggatcagc aaatctatac 3721 aggggctagc aacatcaccc aaaacaacgt ttttaacgtt tgggacaaag gcaagcagtg 3781 ggtgatagac aatcggacca acctaatgca gcccggccct gctgcagcga ccacctttag 3841 cggagaaccc gaccgtcaag ccatgcaaaa cacgctggct tttagtcgga cggtctacga 3901 ccagacaact agtacggccg atcgtaacca gttgctcatt accaacgaag atgaaatcag 3961 acccaccaac tcggtcggta ttgacgtgtg gggagtagtt cccaacaacc aacagtccaa 4021 cgtgtcccct ggaaatcgca caggtgtcaa caaccaaggg gcgcttcccg ggatggtgtg 4081 gcaaaacaga gacatttacc tccaaggacc catttgggcc aaagtccccg acaccgacaa 4141 tcacttccac ccgtctcctc ttattggcgg attcgggtgc aagcaccctc ctccccaaat 4201 tttcattaaa aatacccctg tccctgccaa ccctccggaa acgttccaga cggccaaggt 4261 ggcctccttc atcaaccagt actcgaccgg acagtgcacc gtcgaaatct tttgggaact 4321 gaagaaggaa acctccaaac gctggaaccc cgaaatccag ttcacctcca actttggcaa 4381 cgcggccgac atccagttct ccgtctccga caccggactc tattccgaac ctcgtcccat 4441 cggtacccgt tacctcacca aaccgctgta aatttaaacc cttcaataaa ccgtttatgc 4501 gtaactgtac ttccgtctcc tgtcgttatt cggtcacatg atgcggcatt acctcaccgg 4561 agtgctggcc agtttccaaa acaggctcgc tcgctcactc ggggcgcgac gccaaaggcg 4621 tcgcagcgac cccttcgggg tcgcgccccg agtgagcgag cgagcctgtt ttggaaactg 4681 gcca //